Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os01t0194300-01 | |
| Os02t0512400-01 | |
| Os04t0393500-01 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P16630_001 | Banana | nucleus | 43.96 | 46.85 |
| KXG38496 | Sorghum | nucleus | 36.5 | 45.66 |
| KRG97639 | Soybean | nucleus | 41.65 | 44.75 |
| VIT_07s0031g01320.t01 | Wine grape | nucleus | 40.1 | 44.7 |
| KRH31239 | Soybean | nucleus | 41.65 | 44.51 |
| AT5G10030.3 | Thale cress | nucleus | 41.13 | 43.96 |
| VIT_18s0001g04470.t01 | Wine grape | nucleus | 40.62 | 43.53 |
| CDY37811 | Canola | nucleus | 41.13 | 43.24 |
| Bra031871.1-P | Field mustard | nucleus | 41.13 | 43.24 |
| Zm00001d024160_P003 | Maize | nucleus | 47.04 | 43.16 |
| Bra009063.1-P | Field mustard | nucleus | 40.36 | 43.13 |
| CDX69866 | Canola | nucleus | 40.36 | 43.13 |
| Os04t0637000-01 | Rice | nucleus | 43.96 | 43.07 |
| CDY33975 | Canola | nucleus | 40.87 | 42.97 |
| Solyc04g072460.2.1 | Tomato | nucleus | 39.85 | 42.94 |
| PGSC0003DMT400070884 | Potato | nucleus | 39.85 | 42.94 |
| AT5G65210.2 | Thale cress | nucleus | 40.62 | 42.93 |
| CDY40074 | Canola | nucleus | 39.85 | 42.82 |
| CDY14552 | Canola | nucleus | 40.36 | 42.78 |
| CDY08810 | Canola | nucleus | 40.36 | 42.78 |
| Bra024366.1-P | Field mustard | nucleus | 40.36 | 42.78 |
| CDX85782 | Canola | nucleus | 39.59 | 42.54 |
| Bra028604.1-P | Field mustard | nucleus | 39.59 | 42.54 |
| CDY21625 | Canola | nucleus | 39.33 | 42.03 |
| Solyc12g056860.1.1 | Tomato | nucleus | 36.5 | 40.8 |
| PGSC0003DMT400043651 | Potato | nucleus | 37.79 | 40.72 |
| Solyc04g011670.2.1 | Tomato | nucleus | 38.82 | 40.37 |
| PGSC0003DMT400033308 | Potato | nucleus | 36.76 | 40.17 |
| Os01t0279900-01 | Rice | nucleus | 33.93 | 40.12 |
| CDY18683 | Canola | cytosol | 38.3 | 40.05 |
| Solyc04g054320.2.1 | Tomato | nucleus | 38.05 | 40.0 |
| Os03t0318600-01 | Rice | nucleus | 34.19 | 39.94 |
| CDX81273 | Canola | nucleus | 39.85 | 39.85 |
| KRH43266 | Soybean | nucleus | 38.56 | 39.58 |
| Bra015646.1-P | Field mustard | nucleus | 34.45 | 39.53 |
| KRH59415 | Soybean | nucleus | 37.53 | 39.46 |
| Bra037809.1-P | Field mustard | nucleus | 39.33 | 39.03 |
| Os07t0687700-01 | Rice | nucleus | 33.42 | 38.92 |
| KRH63045 | Soybean | cytosol | 9.25 | 38.3 |
| CDX68037 | Canola | nucleus | 36.5 | 38.27 |
| Os10t0566200-00 | Rice | extracellular | 11.57 | 38.14 |
| AT1G77920.1 | Thale cress | nucleus | 35.22 | 37.23 |
| KRH53141 | Soybean | nucleus | 33.93 | 37.18 |
| KRH18838 | Soybean | nucleus | 35.22 | 37.03 |
| OQU79985 | Sorghum | golgi, vacuole | 48.84 | 36.82 |
| Bra016389.1-P | Field mustard | nucleus | 34.45 | 36.41 |
| CDY41495 | Canola | nucleus | 34.45 | 36.31 |
| KRH16629 | Soybean | nucleus | 34.45 | 36.22 |
| AT1G22070.1 | Thale cress | nucleus | 35.73 | 36.2 |
| PGSC0003DMT400016235 | Potato | nucleus | 36.25 | 35.97 |
| CDY38843 | Canola | nucleus | 34.19 | 35.95 |
| Bra031364.1-P | Field mustard | nucleus | 34.7 | 35.71 |
| KRH64780 | Soybean | nucleus | 32.65 | 35.08 |
| CDY38253 | Canola | nucleus | 34.45 | 34.81 |
| Bra037374.1-P | Field mustard | nucleus | 27.76 | 34.39 |
| Os06t0265400-01 | Rice | nucleus | 32.65 | 32.99 |
| CDY21336 | Canola | nucleus | 34.7 | 32.3 |
| Os05t0492000-00 | Rice | nucleus | 26.99 | 31.82 |
| CDX88399 | Canola | nucleus | 34.96 | 31.63 |
| CDX87494 | Canola | nucleus | 35.99 | 31.53 |
| Os01t0882200-00 | Rice | cytosol, extracellular | 11.31 | 30.99 |
| KRG92164 | Soybean | nucleus | 17.48 | 28.94 |
| Os01t0808100-01 | Rice | nucleus | 25.96 | 27.75 |
| KRH34622 | Soybean | cytosol | 16.45 | 27.71 |
| Os11t0152700-01 | Rice | nucleus | 33.93 | 27.27 |
| Os12t0152900-01 | Rice | nucleus | 33.16 | 26.38 |
| Os02t0194900-00 | Rice | nucleus | 24.94 | 26.01 |
| Os09t0489500-02 | Rice | nucleus | 34.45 | 25.62 |
| Os05t0443900-01 | Rice | nucleus | 31.88 | 25.62 |
| Os09t0280500-01 | Rice | nucleus | 30.33 | 25.27 |
| Os06t0614100-01 | Rice | nucleus | 29.05 | 25.06 |
| CDX79240 | Canola | nucleus | 34.96 | 23.86 |
| Os01t0859500-01 | Rice | nucleus | 31.88 | 23.01 |
| Os01t0859600-01 | Rice | cytosol | 11.83 | 11.03 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | MapMan:15.5.4.7.1 | EMBL:AK107028 | ProteinID:BAD03039.1 | ProteinID:BAD03235.1 |
| ProteinID:BAT04074.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR004827 | InterPro:IPR025422 | EnsemblPlantsGene:Os08g0176900 |
| EnsemblPlants:Os08t0176900-01 | PFAM:PF00170 | PFAM:PF14144 | ScanProsite:PS00036 | PFscan:PS50217 | PFscan:PS51806 |
| PANTHER:PTHR22952 | PANTHER:PTHR22952:SF160 | UniProt:Q6ZBS8 | SMART:SM00338 | SUPFAM:SSF57959 | InterPro:TGA_domain |
| UniParc:UPI0000225FC2 | InterPro:bZIP | SEG:seg | : | : | : |
Description
b-ZIP TRANSCRIPTION FACTOR 64Similar to Transcription factor HBP-1b(C38) (Fragment). (Os08t0176900-01);Hypothetical conserved gene. (Os08t0176900-02)
Coordinates
chr8:-:4505745..4508226
Molecular Weight (calculated)
42550.2 Da
IEP (calculated)
7.444
GRAVY (calculated)
-0.480
Length
389 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSAAPAAAQ FAAPAPAAMG IYDRRHHPLA AGVWGDHPFI RPDTTASTSN AAAAAMVVAP PPLTEPKFES QLALPLQHGD DQDNAAALQE SPRHASDSFE
101: QEASKPRDKI QRRLAQNREA ARKSRLRKKA YIQNLETSRM KLAHLEQEIT RARQQSAYIN RSSNPATLPA PIDSGVVTFE VEYAQWVEEQ GRQTAELRAS
201: LQAAAEGPEL RAVVEAALAH YDRLFAAKRE AARRDVFFVM SGVWRTGAER FFLWIAGFRP SEVIRVLAPQ LEPMTERQAA DVQGLQQKAR HLEDALSQGM
301: DKLKQTLADS LLAEAVVVST SCDASPPPPP PEEEEPSSSA AGDGGCYMAQ MGSAMGRLSN LVAFVDHVRH RRSPPPTSHL HVRRRAELG
101: QEASKPRDKI QRRLAQNREA ARKSRLRKKA YIQNLETSRM KLAHLEQEIT RARQQSAYIN RSSNPATLPA PIDSGVVTFE VEYAQWVEEQ GRQTAELRAS
201: LQAAAEGPEL RAVVEAALAH YDRLFAAKRE AARRDVFFVM SGVWRTGAER FFLWIAGFRP SEVIRVLAPQ LEPMTERQAA DVQGLQQKAR HLEDALSQGM
301: DKLKQTLADS LLAEAVVVST SCDASPPPPP PEEEEPSSSA AGDGGCYMAQ MGSAMGRLSN LVAFVDHVRH RRSPPPTSHL HVRRRAELG
001: MNTTSTHFVP PRRFEVYEPL NQIGMWEESF KNNGDMYTPG SIIIPTNEKP DSLSEDTSHG TEGTPHKFDQ EASTSRHPDK IQRRLAQNRE AARKSRLRKK
101: AYVQQLETSR LKLIHLEQEL DRARQQGFYV GNGVDTNALS FSDNMSSGIV AFEMEYGHWV EEQNRQICEL RTVLHGQVSD IELRSLVENA MKHYFQLFRM
201: KSAAAKIDVF YVMSGMWKTS AERFFLWIGG FRPSELLKVL LPHFDPLTDQ QLLDVCNLRQ SCQQAEDALS QGMEKLQHTL AESVAAGKLG EGSYIPQMTC
301: AMERLEALVS FVNQADHLRH ETLQQMHRIL TTRQAARGLL ALGEYFQRLR ALSSSWAARQ REPT
101: AYVQQLETSR LKLIHLEQEL DRARQQGFYV GNGVDTNALS FSDNMSSGIV AFEMEYGHWV EEQNRQICEL RTVLHGQVSD IELRSLVENA MKHYFQLFRM
201: KSAAAKIDVF YVMSGMWKTS AERFFLWIGG FRPSELLKVL LPHFDPLTDQ QLLDVCNLRQ SCQQAEDALS QGMEKLQHTL AESVAAGKLG EGSYIPQMTC
301: AMERLEALVS FVNQADHLRH ETLQQMHRIL TTRQAARGLL ALGEYFQRLR ALSSSWAARQ REPT
Arabidopsis Description
TGA4At5g10030 [Source:UniProtKB/TrEMBL;Acc:Q24JJ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.