Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX68037 | Canola | nucleus | 57.54 | 88.41 |
| CDX88399 | Canola | nucleus | 50.7 | 67.21 |
| CDX87494 | Canola | nucleus | 50.88 | 65.32 |
| CDY38253 | Canola | nucleus | 43.86 | 64.94 |
| CDY38843 | Canola | nucleus | 41.4 | 63.78 |
| CDY41495 | Canola | nucleus | 41.23 | 63.69 |
| VIT_18s0001g04470.t01 | Wine grape | nucleus | 38.6 | 60.61 |
| CDY21336 | Canola | nucleus | 44.04 | 60.05 |
| KRH63045 | Soybean | cytosol | 9.82 | 59.57 |
| GSMUA_Achr5P16630_001 | Banana | nucleus | 35.26 | 55.07 |
| Solyc04g072460.2.1 | Tomato | nucleus | 33.68 | 53.19 |
| PGSC0003DMT400070884 | Potato | nucleus | 33.33 | 52.63 |
| PGSC0003DMT400043651 | Potato | nucleus | 32.98 | 52.08 |
| Solyc12g056860.1.1 | Tomato | nucleus | 31.58 | 51.72 |
| Zm00001d016312_P001 | Maize | cytosol | 8.42 | 51.61 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.93 | 51.41 |
| KRH18838 | Soybean | nucleus | 32.81 | 50.54 |
| KRH16629 | Soybean | nucleus | 32.81 | 50.54 |
| KRH53141 | Soybean | nucleus | 31.23 | 50.14 |
| CDY08810 | Canola | nucleus | 32.28 | 50.14 |
| CDY14552 | Canola | nucleus | 31.93 | 49.59 |
| GSMUA_Achr10P... | Banana | nucleus | 30.35 | 49.29 |
| CDY33975 | Canola | nucleus | 31.93 | 49.19 |
| KRH64780 | Soybean | nucleus | 31.05 | 48.9 |
| CDY37811 | Canola | nucleus | 31.58 | 48.65 |
| CDX85782 | Canola | nucleus | 30.53 | 48.07 |
| CDY40074 | Canola | nucleus | 30.18 | 47.51 |
| CDY18683 | Canola | cytosol | 30.53 | 46.77 |
| CDX69866 | Canola | nucleus | 29.65 | 46.43 |
| CDY08443 | Canola | nucleus | 26.84 | 46.22 |
| CDX81273 | Canola | nucleus | 31.4 | 46.02 |
| CDY14061 | Canola | nucleus | 26.14 | 45.71 |
| CDY05010 | Canola | nucleus | 26.14 | 45.71 |
| CDY00762 | Canola | nucleus | 26.32 | 45.32 |
| CDX73830 | Canola | nucleus | 26.32 | 45.32 |
| CDY50562 | Canola | nucleus | 26.49 | 45.21 |
| CDY52616 | Canola | nucleus | 26.32 | 45.05 |
| CDX70053 | Canola | nucleus | 25.79 | 44.95 |
| CDX98971 | Canola | nucleus | 25.79 | 44.82 |
| CDY21625 | Canola | nucleus | 28.25 | 44.23 |
| CDY42138 | Canola | nucleus | 24.74 | 43.52 |
| CDY71150 | Canola | nucleus, plastid | 15.09 | 43.43 |
| Os04t0637000-01 | Rice | nucleus | 30.0 | 43.07 |
| CDY70396 | Canola | mitochondrion | 15.61 | 42.58 |
| KXG27222 | Sorghum | nucleus | 28.6 | 39.95 |
| KXG38496 | Sorghum | nucleus | 20.88 | 38.26 |
| Zm00001d026398_P006 | Maize | nucleus | 27.37 | 37.86 |
| TraesCS2A01G526300.1 | Wheat | nucleus | 27.72 | 37.71 |
| CDY70714 | Canola | nucleus | 23.16 | 37.5 |
| TraesCS2D01G529000.1 | Wheat | nucleus | 27.89 | 37.41 |
| TraesCS2B01G556600.1 | Wheat | nucleus | 28.07 | 36.78 |
| CDY70235 | Canola | nucleus | 23.16 | 36.26 |
| Zm00001d024160_P003 | Maize | nucleus | 26.84 | 36.08 |
| CDY00417 | Canola | mitochondrion | 14.56 | 35.78 |
| Os08t0176900-01 | Rice | nucleus | 23.86 | 34.96 |
| Zm00001d002143_P002 | Maize | cytosol | 26.14 | 33.94 |
| CDY22689 | Canola | nucleus | 25.44 | 33.88 |
| Zm00001d041428_P001 | Maize | cytosol | 9.12 | 33.33 |
| CDY38608 | Canola | nucleus | 25.09 | 32.35 |
| CDX98963 | Canola | nucleus | 25.44 | 32.15 |
| CDX70061 | Canola | nucleus | 25.44 | 32.15 |
| CDX95999 | Canola | nucleus | 24.91 | 32.13 |
| CDX95068 | Canola | nucleus | 25.61 | 30.54 |
| CDY06309 | Canola | nucleus | 25.79 | 30.37 |
| CDX93571 | Canola | nucleus | 25.26 | 30.13 |
| OQU79985 | Sorghum | golgi, vacuole | 27.02 | 29.84 |
| HORVU2Hr1G116090.2 | Barley | cytosol | 17.19 | 23.17 |
Protein Annotations
| Gene3D:1.10.287.110 | Gene3D:1.20.5.170 | MapMan:15.5.4.1 | MapMan:15.5.4.7.1 | GO:A0A078CQV3 | EnsemblPlants:CDX79240 |
| ProteinID:CDX79240 | ProteinID:CDX79240.1 | ncoils:Coil | InterPro:DnaJ_domain | InterPro:DnaJ_domain_CS | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00131848001 | InterPro:IPR001623 | InterPro:IPR004827 | InterPro:IPR025422 | InterPro:IPR036869 | InterPro:J_dom_sf |
| PFAM:PF00170 | PFAM:PF00226 | PFAM:PF14144 | PRINTS:PR00625 | ScanProsite:PS00036 | ScanProsite:PS00636 |
| PFscan:PS50076 | PFscan:PS50217 | PFscan:PS51806 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF180 | SMART:SM00271 |
| SMART:SM00338 | SUPFAM:SSF46565 | SUPFAM:SSF57959 | InterPro:TGA_domain | UniParc:UPI0004EE12F4 | InterPro:bZIP |
| SEG:seg | : | : | : | : | : |
Description
BnaC06g20630D
Coordinates
chrLK031817:+:599247..603149
Molecular Weight (calculated)
65516.9 Da
IEP (calculated)
6.050
GRAVY (calculated)
-0.821
Length
570 amino acids
Sequence
(BLAST)
(BLAST)
001: MMSSSSPTQL ASLRDMGIYE PFQQMVSWRN VFKSDINDHS PNTASSSVIQ VDHNIIKASY PSSSHNQIEA EPSGNDHQEE DDDGRNHDKM KRRLAQNREA
101: ARKSRLRKKA YVQQLEESRF KLSQLEQELE KAKQQGVYSS GSSYVGSSGS INTRIAAFEL EYSHWLEEQS RRVSEIRTAL QAHISDIELK MLVESCLNHY
201: ANLFRMKSDA AKADVFYLIS GMWRTSTERF FQWIGGFRPS GLLNVVMPYL QPLTDQQILE VRNLQQSSQQ AEDALSQGID KLQQSLAENI VIDVVMESND
301: YPSHMGAAVE NLQALEGFVN QVSGSFEATN IAANGKDLDD KTSSSRSKDS NFWFGVRQRK TLVRAASSWS EGKSPYDTLE LERDAEEEQI KVAYRRLAKY
401: YHPDVYDGKG TLEEGETAES RFIKIQAAYE LLMDTEKRRQ YDTDNRVNPM KASQAWMEWL MKKRKAFDQR GDMAIAAWAE QQQLEINLRA RRLSRSKVDP
501: EEERKLLEKE KKASRELFNS TLKRHTLVLK KRDLMRKKAE EDKKKLITQL LAAEGLELDT EEEEEEETAK
101: ARKSRLRKKA YVQQLEESRF KLSQLEQELE KAKQQGVYSS GSSYVGSSGS INTRIAAFEL EYSHWLEEQS RRVSEIRTAL QAHISDIELK MLVESCLNHY
201: ANLFRMKSDA AKADVFYLIS GMWRTSTERF FQWIGGFRPS GLLNVVMPYL QPLTDQQILE VRNLQQSSQQ AEDALSQGID KLQQSLAENI VIDVVMESND
301: YPSHMGAAVE NLQALEGFVN QVSGSFEATN IAANGKDLDD KTSSSRSKDS NFWFGVRQRK TLVRAASSWS EGKSPYDTLE LERDAEEEQI KVAYRRLAKY
401: YHPDVYDGKG TLEEGETAES RFIKIQAAYE LLMDTEKRRQ YDTDNRVNPM KASQAWMEWL MKKRKAFDQR GDMAIAAWAE QQQLEINLRA RRLSRSKVDP
501: EEERKLLEKE KKASRELFNS TLKRHTLVLK KRDLMRKKAE EDKKKLITQL LAAEGLELDT EEEEEEETAK
001: MMSSSSPTQL ASLRDMGIYE PFQQIVGWGN VFKSDINDHS PNTATSSIIQ VDPRIDDHNN NIKINYDSSH NQIEAEQPSS NDNQDDDGRI HDKMKRRLAQ
101: NREAARKSRL RKKAYVQQLE ESRLKLSQLE QELEKVKQQG HLGPSGSINT GIASFEMEYS HWLQEQSRRV SELRTALQSH ISDIELKMLV ESCLNHYANL
201: FQMKSDAAKA DVFYLISGMW RTSTERFFQW IGGFRPSELL NVVMPYLQPL TDQQILEVRN LQQSSQQAED ALSQGIDKLQ QSLAESIVID AVIESTHYPT
301: HMAAAIENLQ ALEGFVNQAD HLRQQTLQQM AKILTTRQSA RGLLALGEYL HRLRALSSLW AARPQEPT
101: NREAARKSRL RKKAYVQQLE ESRLKLSQLE QELEKVKQQG HLGPSGSINT GIASFEMEYS HWLQEQSRRV SELRTALQSH ISDIELKMLV ESCLNHYANL
201: FQMKSDAAKA DVFYLISGMW RTSTERFFQW IGGFRPSELL NVVMPYLQPL TDQQILEVRN LQQSSQQAED ALSQGIDKLQ QSLAESIVID AVIESTHYPT
301: HMAAAIENLQ ALEGFVNQAD HLRQQTLQQM AKILTTRQSA RGLLALGEYL HRLRALSSLW AARPQEPT
Arabidopsis Description
TGA7Transcription factor TGA7 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZE2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.