Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031622.1-P | Field mustard | nucleus | 96.73 | 96.73 |
| CDY06309 | Canola | nucleus | 94.63 | 83.68 |
| AT1G08320.4 | Thale cress | nucleus | 89.72 | 79.83 |
| CDX95068 | Canola | nucleus | 89.02 | 79.71 |
| CDX93571 | Canola | nucleus | 89.02 | 79.71 |
| PGSC0003DMT400067782 | Potato | nucleus | 50.23 | 65.35 |
| Solyc11g068370.1.1 | Tomato | nucleus | 56.78 | 65.32 |
| Zm00001d023424_P001 | Maize | nucleus | 44.63 | 61.61 |
| VIT_06s0080g00360.t01 | Wine grape | nucleus | 67.76 | 58.0 |
| GSMUA_Achr11P... | Banana | cytosol | 32.71 | 57.85 |
| CDX70053 | Canola | nucleus | 43.22 | 56.57 |
| HORVU4Hr1G025130.10 | Barley | nucleus | 47.9 | 56.47 |
| CDX98971 | Canola | nucleus | 43.22 | 56.4 |
| PGSC0003DMT400018306 | Potato | nucleus | 63.78 | 55.94 |
| Solyc06g074320.2.1 | Tomato | nucleus | 65.42 | 55.89 |
| KRH26635 | Soybean | nucleus | 62.38 | 54.71 |
| CDY08443 | Canola | nucleus | 42.29 | 54.68 |
| CDY00762 | Canola | nucleus | 42.29 | 54.68 |
| CDY14061 | Canola | nucleus | 41.59 | 54.6 |
| CDX73830 | Canola | nucleus | 42.06 | 54.38 |
| CDY05010 | Canola | nucleus | 41.36 | 54.29 |
| CDY50562 | Canola | nucleus | 42.06 | 53.89 |
| KRH22685 | Soybean | nucleus | 61.68 | 53.88 |
| CDY52616 | Canola | nucleus | 41.82 | 53.75 |
| KRH25227 | Soybean | nucleus | 62.85 | 53.69 |
| KRH30432 | Soybean | nucleus | 61.45 | 53.35 |
| CDY71150 | Canola | nucleus, plastid | 24.53 | 53.03 |
| CDY70396 | Canola | mitochondrion | 24.3 | 49.76 |
| GSMUA_Achr5P26200_001 | Banana | nucleus | 46.96 | 49.51 |
| CDY42138 | Canola | nucleus | 35.98 | 47.53 |
| GSMUA_Achr2P06770_001 | Banana | nucleus | 53.04 | 47.49 |
| GSMUA_Achr10P... | Banana | nucleus | 51.64 | 46.82 |
| KXG22976 | Sorghum | nucleus | 52.8 | 46.79 |
| OQU82891 | Sorghum | nucleus | 53.27 | 46.72 |
| GSMUA_Achr11P... | Banana | nucleus | 53.27 | 46.34 |
| Os05t0443900-01 | Rice | nucleus | 52.1 | 46.07 |
| Zm00001d052543_P001 | Maize | nucleus | 52.1 | 45.88 |
| Os12t0152900-01 | Rice | nucleus | 52.1 | 45.6 |
| CDY41495 | Canola | nucleus | 38.55 | 44.72 |
| CDX68037 | Canola | nucleus | 38.55 | 44.47 |
| CDY38843 | Canola | nucleus | 38.32 | 44.32 |
| CDY70714 | Canola | nucleus | 36.45 | 44.32 |
| CDY38253 | Canola | nucleus | 39.72 | 44.16 |
| Os11t0152700-01 | Rice | nucleus | 49.77 | 44.01 |
| CDY70235 | Canola | nucleus | 37.15 | 43.68 |
| Os01t0859500-01 | Rice | nucleus | 54.44 | 43.23 |
| KXG33735 | Sorghum | nucleus | 53.27 | 42.78 |
| CDY08810 | Canola | nucleus | 36.22 | 42.23 |
| CDX70061 | Canola | nucleus | 44.39 | 42.13 |
| GSMUA_Achr3P22700_001 | Banana | nucleus | 49.77 | 42.09 |
| CDX85782 | Canola | nucleus | 35.51 | 41.99 |
| CDY40074 | Canola | nucleus | 35.28 | 41.71 |
| CDX98963 | Canola | nucleus | 43.93 | 41.69 |
| CDY21336 | Canola | nucleus | 39.95 | 40.91 |
| Zm00001d012294_P009 | Maize | nucleus | 53.04 | 40.9 |
| TraesCS4D01G129900.1 | Wheat | nucleus | 51.4 | 40.89 |
| CDY14552 | Canola | nucleus | 35.05 | 40.87 |
| CDY33975 | Canola | nucleus | 35.28 | 40.81 |
| TraesCS4A01G183400.2 | Wheat | nucleus | 51.4 | 40.67 |
| CDY37811 | Canola | nucleus | 35.05 | 40.54 |
| HORVU1Hr1G073870.2 | Barley | nucleus | 49.3 | 40.34 |
| TraesCS3B01G404800.2 | Wheat | nucleus | 53.74 | 40.14 |
| TraesCS1A01G276600.2 | Wheat | nucleus | 49.3 | 40.11 |
| TraesCS1B01G285800.1 | Wheat | nucleus | 49.3 | 40.11 |
| OQU78097 | Sorghum | nucleus | 48.83 | 40.04 |
| TraesCS3A01G372400.2 | Wheat | nucleus | 53.5 | 39.97 |
| CDX69866 | Canola | nucleus | 33.88 | 39.84 |
| TraesCS1D01G276100.2 | Wheat | nucleus | 48.83 | 39.73 |
| TraesCS3D01G365200.3 | Wheat | nucleus | 53.74 | 39.66 |
| Zm00001d038296_P001 | Maize | nucleus | 47.9 | 39.5 |
| CDY21625 | Canola | nucleus | 33.41 | 39.29 |
| CDY18683 | Canola | cytosol | 34.11 | 39.25 |
| CDX81273 | Canola | nucleus | 35.51 | 39.07 |
| TraesCS4B01G135000.1 | Wheat | nucleus | 51.64 | 39.05 |
| CDX95999 | Canola | nucleus | 39.95 | 38.69 |
| CDY38608 | Canola | nucleus | 39.72 | 38.46 |
| CDX88399 | Canola | nucleus | 38.08 | 37.91 |
| CDX87494 | Canola | nucleus | 38.32 | 36.94 |
| Zm00001d042777_P006 | Maize | nucleus | 53.97 | 35.54 |
| GSMUA_Achr11P... | Banana | nucleus | 20.79 | 28.8 |
| HORVU3Hr1G084340.10 | Barley | nucleus | 36.92 | 27.77 |
| CDY00417 | Canola | mitochondrion | 14.95 | 27.59 |
| CDX79240 | Canola | nucleus | 33.88 | 25.44 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | MapMan:15.5.4.7.1 | GO:A0A078GBG6 | UniProt:A0A078GBG6 | EnsemblPlants:CDY22689 |
| ProteinID:CDY22689 | ProteinID:CDY22689.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00019361001 | InterPro:IPR004827 |
| InterPro:IPR025422 | PFAM:PF00170 | PFAM:PF14144 | ScanProsite:PS00036 | PFscan:PS50217 | PFscan:PS51806 |
| PANTHER:PTHR22952 | PANTHER:PTHR22952:SF179 | SMART:SM00338 | SUPFAM:SSF57959 | InterPro:TGA_domain | UniParc:UPI0004EED0D8 |
| InterPro:bZIP | SEG:seg | : | : | : | : |
Description
BnaC08g43230DBnaC08g43230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GBG6]
Coordinates
chrLK032134:+:479786..485237
Molecular Weight (calculated)
47530.6 Da
IEP (calculated)
8.592
GRAVY (calculated)
-0.430
Length
428 amino acids
Sequence
(BLAST)
(BLAST)
001: MSICRCNDGK FAGLFAGGGA TTLEIFPSWP IRTHKSLPTE SSKSGGESSD SGSANFSGKA ESQLPESPMS SKQNHHLMLQ HNHNNNMANS TSASGLPSTS
101: RTLAPPKASE DKRKATTSGK LLDAKTLRRL AQNREAARKS RLRKKAYVQQ LESSRIKLSQ LEQELQRARS QGVFMGGCGP HGPNITSGAA MFDMEYGRWL
201: EDENRHMSEI RTGLQAHLSD NDLRLIVDGY IAHFDEVFRL KAVAAKADVF HLIIGTWMSP AERCFIWMAG FRPSDFIKIL VSQMDLLTEQ QLMGIYSLQH
301: SSQQAEEALS QGLEQLQQSL IDTLAASQVI DGMQQMAVAL GKVSNLEGFI RQADNLRQQT VHQLRQILTV RQAARCFLLI GEYYGRLRAL SSLWLSRPPE
401: TLINDETSCQ TTTDLQVVQS SHNQFSNF
101: RTLAPPKASE DKRKATTSGK LLDAKTLRRL AQNREAARKS RLRKKAYVQQ LESSRIKLSQ LEQELQRARS QGVFMGGCGP HGPNITSGAA MFDMEYGRWL
201: EDENRHMSEI RTGLQAHLSD NDLRLIVDGY IAHFDEVFRL KAVAAKADVF HLIIGTWMSP AERCFIWMAG FRPSDFIKIL VSQMDLLTEQ QLMGIYSLQH
301: SSQQAEEALS QGLEQLQQSL IDTLAASQVI DGMQQMAVAL GKVSNLEGFI RQADNLRQQT VHQLRQILTV RQAARCFLLI GEYYGRLRAL SSLWLSRPPE
401: TLINDETSCQ TTTDLQVVQS SHNQFSNF
001: MANHRMSEAT NHNHNHHLPY SLIHGLNNNH PSSGFINQDG SSSFDFGELE EAIVLQGVKY RNEEAKPPLL GGGGGATTLE MFPSWPIRTH QTLPTESSKS
101: GGESSDSGSA NFSGKAESQQ PESPMSSKHH LMLQPHHNNM ANSSSTSGLP STSRTLAPPK PSEDKRKATT SGKQLDAKTL RRLAQNREAA RKSRLRKKAY
201: VQQLESSRIK LSQLEQELQR ARSQGLFMGG CGPPGPNITS GAAIFDMEYG RWLEDDNRHM SEIRTGLQAH LSDNDLRLIV DGYIAHFDEI FRLKAVAAKA
301: DVFHLIIGTW MSPAERCFIW MAGFRPSDLI KILVSQMDLL TEQQLMGIYS LQHSSQQAEE ALSQGLEQLQ QSLIDTLAAS PVIDGMQQMA VALGKISNLE
401: GFIRQADNLR QQTVHQLRRI LTVRQAARCF LVIGEYYGRL RALSSLWLSR PRETLMSDET SCQTTTDLQI VQSSRNHFSN F
101: GGESSDSGSA NFSGKAESQQ PESPMSSKHH LMLQPHHNNM ANSSSTSGLP STSRTLAPPK PSEDKRKATT SGKQLDAKTL RRLAQNREAA RKSRLRKKAY
201: VQQLESSRIK LSQLEQELQR ARSQGLFMGG CGPPGPNITS GAAIFDMEYG RWLEDDNRHM SEIRTGLQAH LSDNDLRLIV DGYIAHFDEI FRLKAVAAKA
301: DVFHLIIGTW MSPAERCFIW MAGFRPSDLI KILVSQMDLL TEQQLMGIYS LQHSSQQAEE ALSQGLEQLQ QSLIDTLAAS PVIDGMQQMA VALGKISNLE
401: GFIRQADNLR QQTVHQLRRI LTVRQAARCF LVIGEYYGRL RALSSLWLSR PRETLMSDET SCQTTTDLQI VQSSRNHFSN F
Arabidopsis Description
TGA9Transcription factor TGA9 [Source:UniProtKB/Swiss-Prot;Acc:Q93XM6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.