Factsheet for HORVU1Hr1G073870.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G276100.2	Wheat	nucleus	92.93	92.4
TraesCS1B01G285800.1	Wheat	nucleus	92.35	91.83
TraesCS1A01G276600.2	Wheat	nucleus	91.2	90.68
Os05t0443900-01	Rice	nucleus	75.91	82.02
OQU78097	Sorghum	nucleus	72.85	72.99
Zm00001d038296_P001	Maize	nucleus	72.08	72.64
GSMUA_Achr11P...	Banana	cytosol	26.39	57.02
Solyc11g068370.1.1	Tomato	nucleus	39.01	54.84
HORVU3Hr1G042830.1	Barley	cytosol, mitochondrion, nucleus, plastid	15.49	54.36
HORVU4Hr1G025130.10	Barley	nucleus	37.67	54.27
PGSC0003DMT400067782	Potato	nucleus	33.65	53.5
GSMUA_Achr11P...	Banana	nucleus	49.71	52.85
HORVU3Hr1G042790.4	Barley	nucleus	32.5	51.36
KRH22685	Soybean	nucleus	47.61	50.82
KRH26635	Soybean	nucleus	47.23	50.61
GSMUA_Achr10P...	Banana	nucleus	45.12	50.0
VIT_06s0080g00360.t01	Wine grape	nucleus	47.61	49.8
PGSC0003DMT400018306	Potato	nucleus	46.27	49.59
CDY22689	Canola	nucleus	40.34	49.3
Bra031622.1-P	Field mustard	nucleus	40.34	49.3
GSMUA_Achr5P26200_001	Banana	nucleus	38.24	49.26
GSMUA_Achr3P22700_001	Banana	nucleus	47.42	49.01
HORVU2Hr1G016580.5	Barley	nucleus	31.55	48.96
Solyc06g074320.2.1	Tomato	nucleus	46.85	48.9
Bra018634.1-P	Field mustard	nucleus	44.17	48.63
CDX95068	Canola	nucleus	44.17	48.33
HORVU4Hr1G052330.3	Barley	nucleus	30.78	48.2
CDX93571	Canola	nucleus	43.79	47.91
KRH25227	Soybean	nucleus	45.89	47.9
KRH30432	Soybean	nucleus	45.12	47.87
HORVU3Hr1G084340.10	Barley	nucleus	52.01	47.8
AT1G08320.4	Thale cress	nucleus	43.59	47.4
CDY06309	Canola	nucleus	43.59	47.11
HORVU7Hr1G042180.5	Barley	nucleus	29.25	40.58
HORVU2Hr1G116130.4	Barley	nucleus	10.13	39.85
HORVU3Hr1G079010.5	Barley	nucleus	36.14	39.62
HORVU1Hr1G068220.1	Barley	nucleus	25.81	39.36
GSMUA_Achr11P...	Banana	nucleus	20.84	35.28
HORVU0Hr1G015710.1	Barley	nucleus	30.59	34.78
HORVU0Hr1G032230.4	Barley	nucleus	22.18	33.05
HORVU5Hr1G053330.5	Barley	nucleus	30.59	31.75
HORVU5Hr1G073410.1	Barley	nucleus	33.84	31.22
HORVU2Hr1G116090.2	Barley	cytosol	18.93	23.4

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	MapMan:15.5.4.7.1	UniProt:A0A287G8C5	ncoils:Coil	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565
EnsemblPlantsGene:HORVU1Hr1G073870	EnsemblPlants:HORVU1Hr1G073870.2	InterPro:IPR004827	InterPro:IPR025422	PFAM:PF00170	PFAM:PF14144
ScanProsite:PS00036	PFscan:PS50217	PFscan:PS51806	PANTHER:PTHR22952	PANTHER:PTHR22952:SF346	SMART:SM00338
SUPFAM:SSF57959	InterPro:TGA_domain	UniParc:UPI000B4814EC	InterPro:bZIP	SEG:seg	:

Description

No Description!

Coordinates

chrchr1H:+:504928026..504934095

Molecular Weight (calculated)

57732.1 Da

IEP (calculated)

6.512

GRAVY (calculated)

-0.506

Length

523 amino acids

Sequence
(BLAST)

001: MPRLGRGESS WGTAGDRDRA AVPFGQALGH GIQGHAPPAN FLELQPAAAA YFGELEEALI HGACAAGVDP VMIESDAHTK SAAAAVAGYL AARPPTLEIF
101: PSWPMSHLQR PYSGNSQSVG STDSSSAQNT MSQAELVSPV SIRTDSGPRQ QQQQQQQQDQ QEVLMVTIDD YNYSQGLGAA PATAQSFQQH AGAQDKRKHG
201: STKKDGKLVD PKTERRLAQN REAARKSRLR KKAYVQQLET GRIRLQQIEQ ELQRGRSQGL LTGGCSAPGE MSSAAVMFDM EYARWLDEDS KYMAEIQGAL
301: QAQVLDANLS TIVEDCMRHY DELFHLRAVL ARSDVFHLMT GMWATQSERC FLWMAGFRPS EILKMLIPQL DPSTEQQLLG MCNLQQSSEQ AEEALSQGLQ
401: QLHQSLADAV GAGPLNDGAD VANYATLMAL ALDRLDNLES FYRQADNLRQ QTLHHMRRIL TTRQTARCFV SLGEYHRRLR ALSSIWASRP RENLGMAENV
501: SSTAAEFQPI IHHQSQQNQF SGL

Best Arabidopsis Sequence Match ( AT1G08320.1 )
(BLAST)

001: MANHRMSEAT NHNHNHHLPY SLIHGLNNNH PSSGFINQDG SSSFDFGELE EAIVLQGVKY RNEEAKPPLL GGGGGATTLE MFPSWPIRTH QTLPTESSKS
101: GGESSDSGSA NFSGKAESQQ PESPMSSKHH LMLQPHHNNM ANSSSTSGLP STSRTLAPPK PSEDKRKATT SGKQLDAKTL RRLAQNREAA RKSRLRKKAY
201: VQQLESSRIK LSQLEQELQR ARSQGLFMGG CGPPGPNITS GAAIFDMEYG RWLEDDNRHM SEIRTGLQAH LSDNDLRLIV DGYIAHFDEI FRLKAVAAKA
301: DVFHLIIGTW MSPAERCFIW MAGFRPSDLI KILVSQMDLL TEQQLMGIYS LQHSSQQAEE ALSQGLEQLQ QSLIDTLAAS PVIDGMQQMA VALGKISNLE
401: GFIRQADNLR QQTVHQLRRI LTVRQAARCF LVIGEYYGRL RALSSLWLSR PRETLMSDET SCQTTTDLQI VQSSRNHFSN F

Arabidopsis Description

TGA9Transcription factor TGA9 [Source:UniProtKB/Swiss-Prot;Acc:Q93XM6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.