Factsheet for Bra018634.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
nucleus 5
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93571	Canola	nucleus	98.11	97.49
CDX95068	Canola	nucleus	97.89	97.28
AT1G08320.4	Thale cress	nucleus	92.0	90.85
Bra031622.1-P	Field mustard	nucleus	80.21	89.02
Solyc11g068370.1.1	Tomato	nucleus	52.42	66.94
PGSC0003DMT400067782	Potato	nucleus	46.32	66.87
VIT_06s0080g00360.t01	Wine grape	nucleus	69.89	66.4
PGSC0003DMT400018306	Potato	nucleus	66.11	64.34
Solyc06g074320.2.1	Tomato	nucleus	67.37	63.87
KRH26635	Soybean	nucleus	64.84	63.11
KRH25227	Soybean	nucleus	65.68	62.28
KRH22685	Soybean	nucleus	64.21	62.24
KRH30432	Soybean	nucleus	64.0	61.66
Zm00001d023424_P001	Maize	nucleus	39.79	60.97
Bra009241.1-P	Field mustard	nucleus	38.53	59.03
HORVU4Hr1G025130.10	Barley	nucleus	43.58	57.02
GSMUA_Achr11P...	Banana	cytosol	28.84	56.61
Bra034767.1-P	Field mustard	nucleus	38.95	55.89
Bra001443.1-P	Field mustard	nucleus	38.53	55.29
Bra038705.1-P	Field mustard	nucleus	38.53	54.79
Bra028713.1-P	Field mustard	nucleus	37.47	54.6
GSMUA_Achr2P06770_001	Banana	nucleus	52.42	52.09
GSMUA_Achr10P...	Banana	nucleus	50.53	50.85
GSMUA_Achr11P...	Banana	nucleus	52.63	50.81
KXG22976	Sorghum	nucleus	51.58	50.72
Zm00001d052543_P001	Maize	nucleus	51.58	50.41
GSMUA_Achr5P26200_001	Banana	nucleus	42.95	50.25
OQU82891	Sorghum	nucleus	51.58	50.2
Os12t0152900-01	Rice	nucleus	50.95	49.49
Os11t0152700-01	Rice	nucleus	49.47	48.55
Os05t0443900-01	Rice	nucleus	49.26	48.35
Bra015646.1-P	Field mustard	nucleus	34.32	48.08
Bra009233.1-P	Field mustard	cytosol	27.79	47.14
Os01t0859500-01	Rice	nucleus	53.05	46.75
KXG33735	Sorghum	nucleus	52.21	46.53
Bra031364.1-P	Field mustard	nucleus	36.84	46.3
GSMUA_Achr3P22700_001	Banana	nucleus	48.21	45.26
Bra016389.1-P	Field mustard	nucleus	34.95	45.11
HORVU1Hr1G073870.2	Barley	nucleus	48.63	44.17
Zm00001d012294_P009	Maize	nucleus	51.58	44.14
TraesCS4D01G129900.1	Wheat	nucleus	49.89	44.05
TraesCS1B01G285800.1	Wheat	nucleus	48.63	43.92
TraesCS4A01G183400.2	Wheat	nucleus	49.89	43.81
TraesCS3B01G404800.2	Wheat	nucleus	52.84	43.8
TraesCS3A01G372400.2	Wheat	nucleus	52.63	43.63
TraesCS1A01G276600.2	Wheat	nucleus	48.21	43.54
TraesCS1D01G276100.2	Wheat	nucleus	48.21	43.54
OQU78097	Sorghum	nucleus	47.79	43.49
TraesCS3D01G365200.3	Wheat	nucleus	53.05	43.45
Bra024366.1-P	Field mustard	nucleus	33.26	43.05
Zm00001d038296_P001	Maize	nucleus	46.74	42.77
Bra028604.1-P	Field mustard	nucleus	32.42	42.54
TraesCS4B01G135000.1	Wheat	nucleus	50.11	42.05
Bra031871.1-P	Field mustard	nucleus	32.63	41.89
Bra005914.1-P	Field mustard	nucleus	37.26	40.78
Bra009063.1-P	Field mustard	nucleus	31.16	40.66
Bra004329.1-P	Field mustard	nucleus	37.68	40.59
Zm00001d042777_P006	Maize	nucleus	53.05	38.77
Bra037809.1-P	Field mustard	nucleus	31.58	38.27
GSMUA_Achr11P...	Banana	nucleus	22.32	34.3
Bra037374.1-P	Field mustard	nucleus	22.32	33.76
HORVU3Hr1G084340.10	Barley	nucleus	37.68	31.46

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	MapMan:15.5.4.7.1	EnsemblPlantsGene:Bra018634	EnsemblPlants:Bra018634.1	EnsemblPlants:Bra018634.1-P
ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR004827	InterPro:IPR025422	UniProt:M4DQ43	PFAM:PF00170
PFAM:PF14144	ScanProsite:PS00036	PFscan:PS50217	PFscan:PS51806	PANTHER:PTHR22952	PANTHER:PTHR22952:SF179
SMART:SM00338	SUPFAM:SSF57959	InterPro:TGA_domain	UniParc:UPI000253E727	InterPro:bZIP	SEG:seg

Description

AT1G08320 (E=4e-199) | bZIP family transcription factor

Coordinates

chrA06:-:2876681..2881710

Molecular Weight (calculated)

53103.9 Da

IEP (calculated)

7.759

GRAVY (calculated)

-0.589

Length

475 amino acids

Sequence
(BLAST)

001: MATNHNHSHH LSYSLLHGLS NNPPPPGFIN QDGSSSFDFG ELEEAIVLQG VKYRNDETKP RGGGGATTLE MFPSWPIRTH QTLPTEESSK SEGESTDSGS
101: ANFSSKAESQ QPESPMSNKQ NHQLMLQHQR NNNMANSAST SGLPSTSRTP GPPKSTEDKR KATTSGKLLD AKTLRRLAQN REAARKSRLR KKAYVQQLES
201: SRIKLSQLEQ ELQRARSQGM FMGGCGPPGP NITSGAAMFD MEYERWLEED NRHMSEIRTG LQAHLSDNDL RLIVDGYIAH FDEVLRLKAV AAKADVFHLI
301: IGTWMSPAER CFIWMAGFRP SDLIKILVSQ MDLLTEQQLM GIYSLQHSSQ QAEEALSQGL EQLQQSLIDT LAASPVMDGM QQMAVALGKI SNLEGFIRQA
401: DNLRQQTVHQ LRRILTVRQA ARCFLVIGEY YGRLRALSSL WLSRPRETLI SDETSCQTTT DLQMVQSSRN HFSNF

Best Arabidopsis Sequence Match ( AT1G08320.3 )
(BLAST)

001: MANHRMSEAT NHNHNHHLPY SLIHGLNNNH PSSGFINQDG SSSFDFGELE EAIVLQGVKY RNEEAKPPLL GGGGGATTLE MFPSWPIRTH QTLPTESSKS
101: GGESSDSGSA NFSGKAESQQ PESPMSSKHH LMLQPHHNNM ANSSSTSGLP STSRTLAPPK PSEDKRKATT SGKQLDAKTL RRLAQNREAA RKSRLRKKAY
201: VQQLESSRIK LSQLEQELQR ARSQGLFMGG CGPPGPNITS GAAIFDMEYG RWLEDDNRHM SEIRTGLQAH LSDNDLRLIV DGYIAHFDEI FRLKAVAAKA
301: DVFHLIIGTW MSPAERCFIW MAGFRPSDLI KILVSQMDLL TEQQLMGIYS LQHSSQQAEE ALSQGLEQLQ QSLIDTLAAS PVIDGMQQMA VALGKISNLE
401: GFIRQADNLR QQTVHQLRRI LTVRQAARCF LVIGEYYGRL RALSSLWLSR PRETLMSDET SCQTTTDLQI VQSSRNHFSN F

Arabidopsis Description

TGA9Transcription factor TGA9 [Source:UniProtKB/Swiss-Prot;Acc:Q93XM6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.