Factsheet for GSMUA_Achr3P22700_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	32.02	66.94
GSMUA_Achr11P...	Banana	nucleus	62.45	64.23
GSMUA_Achr10P...	Banana	nucleus	59.09	63.35
GSMUA_Achr2P06770_001	Banana	nucleus	56.52	59.83
GSMUA_Achr5P26200_001	Banana	nucleus	47.43	59.11
GSMUA_Achr8P05800_001	Banana	nucleus	36.17	55.12
Solyc11g068370.1.1	Tomato	nucleus	40.32	54.84
PGSC0003DMT400067782	Potato	nucleus	35.18	54.1
VIT_06s0080g00360.t01	Wine grape	nucleus	53.16	53.8
GSMUA_Achr3P25020_001	Banana	nucleus	35.18	53.61
Solyc06g074320.2.1	Tomato	nucleus	51.38	51.9
PGSC0003DMT400018306	Potato	nucleus	49.8	51.64
KRH26635	Soybean	nucleus	49.6	51.43
Os05t0443900-01	Rice	nucleus	49.01	51.24
KRH22685	Soybean	nucleus	49.6	51.22
KRH30432	Soybean	nucleus	49.41	50.71
KRH25227	Soybean	nucleus	50.2	50.7
CDY22689	Canola	nucleus	42.09	49.77
Bra031622.1-P	Field mustard	nucleus	42.09	49.77
AT1G08320.4	Thale cress	nucleus	46.25	48.65
CDX93571	Canola	nucleus	45.85	48.54
Bra018634.1-P	Field mustard	nucleus	45.26	48.21
Os01t0859500-01	Rice	nucleus	51.19	48.05
CDX95068	Canola	nucleus	45.26	47.91
CDY06309	Canola	nucleus	45.45	47.52
HORVU1Hr1G073870.2	Barley	nucleus	49.01	47.42
TraesCS1B01G285800.1	Wheat	nucleus	49.21	47.34
KXG33735	Sorghum	nucleus	49.8	47.28
TraesCS1D01G276100.2	Wheat	nucleus	48.81	46.96
GSMUA_Achr9P27700_001	Banana	nucleus	34.59	46.67
TraesCS1A01G276600.2	Wheat	nucleus	48.42	46.58
GSMUA_AchrUn_...	Banana	nucleus	32.41	46.33
GSMUA_Achr5P16630_001	Banana	nucleus	33.4	46.3
OQU78097	Sorghum	nucleus	47.63	46.17
Zm00001d038296_P001	Maize	nucleus	47.04	45.86
TraesCS3B01G404800.2	Wheat	nucleus	50.4	44.5
GSMUA_Achr10P...	Banana	nucleus	30.63	44.16
TraesCS3A01G372400.2	Wheat	nucleus	50.0	44.15
TraesCS3D01G365200.3	Wheat	nucleus	50.59	44.14
Zm00001d012294_P009	Maize	nucleus	47.83	43.6
GSMUA_Achr3P11150_001	Banana	nucleus	35.57	43.48
GSMUA_Achr10P...	Banana	nucleus	37.55	41.58
GSMUA_Achr11P...	Banana	nucleus	38.34	40.59
GSMUA_Achr9P15550_001	Banana	nucleus	34.19	40.33
Zm00001d042777_P006	Maize	nucleus	50.4	39.23
GSMUA_Achr11P...	Banana	nucleus	23.52	38.51
GSMUA_AchrUn_...	Banana	nucleus	34.78	35.77
GSMUA_Achr9P20200_001	Banana	plastid	35.57	32.91
GSMUA_Achr8P21670_001	Banana	nucleus	37.75	32.82
HORVU3Hr1G084340.10	Barley	nucleus	34.39	30.58

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	MapMan:15.5.4.7.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	EnsemblPlantsGene:GSMUA_Achr3G22700_001
EnsemblPlants:GSMUA_Achr3P22700_001	EnsemblPlants:GSMUA_Achr3T22700_001	InterPro:IPR004827	InterPro:IPR025422	UniProt:M0SGY6	PFAM:PF00170
PFAM:PF14144	ScanProsite:PS00036	PFscan:PS50217	PFscan:PS51806	PANTHER:PTHR22952	PANTHER:PTHR22952:SF215
SMART:SM00338	SUPFAM:SSF57959	InterPro:TGA_domain	UniParc:UPI000294EA92	InterPro:bZIP	SEG:seg

Description

transcription factor, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G22700_001]

Coordinates

chr3:+:23574703..23579288

Molecular Weight (calculated)

56079.9 Da

IEP (calculated)

6.909

GRAVY (calculated)

-0.308

Length

506 amino acids

Sequence
(BLAST)

001: MVQEGEETWI ADHRVGETGL SDPRLSTHGI HGTTPAATKF FDQEEASYFG GLEEALMDGV DGIRETEDSK SRLPTLQIFP SWPMRFQQSP RQGSLWSARS
101: SASSSAQNTA SHPESDNPAS RMASSDLCAD HKQQQEVMMT ILTSIAPDSL GLSSCSLSQV CFCFLMQMNS DMTKFIVSTR KMTGSTARKD GKVLDPKRLR
201: RLAQNREAAR KSRLRKKAYV QQLETSRIRL QQLEQDLHSA RLQGVFLGVA GCANGSTSSS AAMFDMEYAR WLDENCKHMS GLQGAIQAHL PDGDLGVIVD
301: QCAVHYDELF RLKAIVVKSD VLHLLNGAWR TPAERCFLWM GGFRPSELLK MVVAQLDPLT EQQFMGICNL QQSSQQAEEA LSQGLEQLHH SLADAIAGGF
401: LSNGVADGSY MVIALGKLDN LEGLVRQADK LRQQSLHQLR SLFTTIQAAK CFLAIGEYYA RLRALSSLWA SRPRESLIRN DGVVSTSTDL QIVHQPLQNH
501: FPYLPL

Best Arabidopsis Sequence Match ( AT1G08320.3 )
(BLAST)

001: MANHRMSEAT NHNHNHHLPY SLIHGLNNNH PSSGFINQDG SSSFDFGELE EAIVLQGVKY RNEEAKPPLL GGGGGATTLE MFPSWPIRTH QTLPTESSKS
101: GGESSDSGSA NFSGKAESQQ PESPMSSKHH LMLQPHHNNM ANSSSTSGLP STSRTLAPPK PSEDKRKATT SGKQLDAKTL RRLAQNREAA RKSRLRKKAY
201: VQQLESSRIK LSQLEQELQR ARSQGLFMGG CGPPGPNITS GAAIFDMEYG RWLEDDNRHM SEIRTGLQAH LSDNDLRLIV DGYIAHFDEI FRLKAVAAKA
301: DVFHLIIGTW MSPAERCFIW MAGFRPSDLI KILVSQMDLL TEQQLMGIYS LQHSSQQAEE ALSQGLEQLQ QSLIDTLAAS PVIDGMQQMA VALGKISNLE
401: GFIRQADNLR QQTVHQLRRI LTVRQAARCF LVIGEYYGRL RALSSLWLSR PRETLMSDET SCQTTTDLQI VQSSRNHFSN F

Arabidopsis Description

TGA9Transcription factor TGA9 [Source:UniProtKB/Swiss-Prot;Acc:Q93XM6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.