Factsheet for Bra031622.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	plastid
EpiLoc:	nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22689	Canola	nucleus	96.73	96.73
CDY06309	Canola	nucleus	96.5	85.33
AT1G08320.4	Thale cress	nucleus	90.19	80.25
Bra018634.1-P	Field mustard	nucleus	89.02	80.21
PGSC0003DMT400067782	Potato	nucleus	50.7	65.96
Solyc11g068370.1.1	Tomato	nucleus	57.24	65.86
Zm00001d023424_P001	Maize	nucleus	44.86	61.94
Bra009241.1-P	Field mustard	nucleus	42.76	59.03
VIT_06s0080g00360.t01	Wine grape	nucleus	67.76	58.0
HORVU4Hr1G025130.10	Barley	nucleus	48.36	57.02
GSMUA_Achr11P...	Banana	cytosol	32.24	57.02
PGSC0003DMT400018306	Potato	nucleus	64.25	56.35
Solyc06g074320.2.1	Tomato	nucleus	65.89	56.29
Bra034767.1-P	Field mustard	nucleus	42.76	55.29
KRH26635	Soybean	nucleus	62.62	54.92
Bra028713.1-P	Field mustard	nucleus	41.82	54.91
Bra001443.1-P	Field mustard	nucleus	42.29	54.68
Bra038705.1-P	Field mustard	nucleus	42.29	54.19
KRH22685	Soybean	nucleus	61.92	54.08
KRH25227	Soybean	nucleus	62.85	53.69
KRH30432	Soybean	nucleus	61.68	53.55
GSMUA_Achr5P26200_001	Banana	nucleus	47.2	49.75
GSMUA_Achr2P06770_001	Banana	nucleus	53.04	47.49
GSMUA_Achr10P...	Banana	nucleus	52.1	47.25
Bra015646.1-P	Field mustard	nucleus	37.38	47.2
KXG22976	Sorghum	nucleus	53.04	47.0
OQU82891	Sorghum	nucleus	53.5	46.93
Bra009233.1-P	Field mustard	cytosol	30.61	46.79
GSMUA_Achr11P...	Banana	nucleus	53.04	46.14
Zm00001d052543_P001	Maize	nucleus	52.34	46.09
Os12t0152900-01	Rice	nucleus	52.34	45.81
Os05t0443900-01	Rice	nucleus	51.4	45.45
Bra031364.1-P	Field mustard	nucleus	39.95	45.24
Bra016389.1-P	Field mustard	nucleus	38.32	44.57
Os11t0152700-01	Rice	nucleus	50.0	44.21
Os01t0859500-01	Rice	nucleus	54.44	43.23
KXG33735	Sorghum	nucleus	53.5	42.96
Bra024366.1-P	Field mustard	nucleus	36.68	42.78
Bra028604.1-P	Field mustard	nucleus	35.98	42.54
GSMUA_Achr3P22700_001	Banana	nucleus	49.77	42.09
Bra031871.1-P	Field mustard	nucleus	35.75	41.35
TraesCS4D01G129900.1	Wheat	nucleus	51.64	41.08
TraesCS4A01G183400.2	Wheat	nucleus	51.64	40.85
Zm00001d012294_P009	Maize	nucleus	52.8	40.72
Bra009063.1-P	Field mustard	nucleus	34.35	40.38
HORVU1Hr1G073870.2	Barley	nucleus	49.3	40.34
TraesCS3B01G404800.2	Wheat	nucleus	53.97	40.31
TraesCS3A01G372400.2	Wheat	nucleus	53.74	40.14
TraesCS1B01G285800.1	Wheat	nucleus	49.3	40.11
TraesCS1D01G276100.2	Wheat	nucleus	49.07	39.92
OQU78097	Sorghum	nucleus	48.6	39.85
TraesCS3D01G365200.3	Wheat	nucleus	53.97	39.83
TraesCS1A01G276600.2	Wheat	nucleus	48.83	39.73
Bra004329.1-P	Field mustard	nucleus	40.65	39.46
Zm00001d038296_P001	Maize	nucleus	47.66	39.31
TraesCS4B01G135000.1	Wheat	nucleus	51.87	39.22
Bra005914.1-P	Field mustard	nucleus	39.49	38.94
Bra037809.1-P	Field mustard	nucleus	35.05	38.27
Zm00001d042777_P006	Maize	nucleus	54.21	35.69
Bra037374.1-P	Field mustard	nucleus	25.0	34.08
GSMUA_Achr11P...	Banana	nucleus	20.33	28.16
HORVU3Hr1G084340.10	Barley	nucleus	37.15	27.94

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	MapMan:15.5.4.7.1	EnsemblPlantsGene:Bra031622	EnsemblPlants:Bra031622.1	EnsemblPlants:Bra031622.1-P
ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR004827	InterPro:IPR025422	UniProt:M4ES44	PFAM:PF00170
PFAM:PF14144	ScanProsite:PS00036	PFscan:PS50217	PFscan:PS51806	PANTHER:PTHR22952	PANTHER:PTHR22952:SF179
SMART:SM00338	SUPFAM:SSF57959	InterPro:TGA_domain	UniParc:UPI0002543310	InterPro:bZIP	SEG:seg

Description

AT1G08320 (E=2e-178) | bZIP family transcription factor

Coordinates

chrA09:+:35535719..35540206

Molecular Weight (calculated)

47738.0 Da

IEP (calculated)

9.008

GRAVY (calculated)

-0.437

Length

428 amino acids

Sequence
(BLAST)

001: MSICRCNDGK FAGLFAGGGA TTLEMFPSWP IRTHKSLPTE SSKSGGESSD SESANFSGKA ESQLPESPMS SKQNHHLMLQ HHHSNNMANS TSASGLPSTS
101: RTLAPPKASE DKRKATTSGK LLDAKTLRRL AQNREAARKS RLRKKAYVQQ LESSRIKLSQ LEQELQRARS QGMFMGGCGP PGPNITSGAA MFDMEYGRWL
201: EDENRHMSEI RTGLQAHLSD NDLRLIVDGY IAHFDEVFRL KAVAAKADVF HLIIGTWMSP AERCFIWMAG FRPSDFIKIL VSQMDLLTEQ QLMGIYSLQH
301: SSQQAEEALS QGLEQLQQSL IDTLAASQVI DGMQQMAVAL GKVSNLEGFI RQADNLRQQT VHQLRRILTV RQAARCFLVI GEYYGRLRAL SSLWLSRPRE
401: TLINDETSCQ TATDLQMVHL SRNQFSNF

Best Arabidopsis Sequence Match ( AT1G08320.3 )
(BLAST)

001: MANHRMSEAT NHNHNHHLPY SLIHGLNNNH PSSGFINQDG SSSFDFGELE EAIVLQGVKY RNEEAKPPLL GGGGGATTLE MFPSWPIRTH QTLPTESSKS
101: GGESSDSGSA NFSGKAESQQ PESPMSSKHH LMLQPHHNNM ANSSSTSGLP STSRTLAPPK PSEDKRKATT SGKQLDAKTL RRLAQNREAA RKSRLRKKAY
201: VQQLESSRIK LSQLEQELQR ARSQGLFMGG CGPPGPNITS GAAIFDMEYG RWLEDDNRHM SEIRTGLQAH LSDNDLRLIV DGYIAHFDEI FRLKAVAAKA
301: DVFHLIIGTW MSPAERCFIW MAGFRPSDLI KILVSQMDLL TEQQLMGIYS LQHSSQQAEE ALSQGLEQLQ QSLIDTLAAS PVIDGMQQMA VALGKISNLE
401: GFIRQADNLR QQTVHQLRRI LTVRQAARCF LVIGEYYGRL RALSSLWLSR PRETLMSDET SCQTTTDLQI VQSSRNHFSN F

Arabidopsis Description

TGA9Transcription factor TGA9 [Source:UniProtKB/Swiss-Prot;Acc:Q93XM6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.