Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr2P06770_001 | Banana | nucleus | 39.81 | 25.73 |
| GSMUA_Achr11P... | Banana | nucleus | 40.45 | 25.41 |
| VIT_06s0080g00360.t01 | Wine grape | nucleus | 40.78 | 25.2 |
| Solyc06g074320.2.1 | Tomato | nucleus | 39.16 | 24.15 |
| KRH26635 | Soybean | nucleus | 37.86 | 23.98 |
| KRH22685 | Soybean | nucleus | 37.86 | 23.88 |
| KRH25227 | Soybean | nucleus | 38.19 | 23.55 |
| GSMUA_Achr3P22700_001 | Banana | nucleus | 38.51 | 23.52 |
| AT1G08320.4 | Thale cress | nucleus | 36.57 | 23.49 |
| PGSC0003DMT400018306 | Potato | nucleus | 36.89 | 23.36 |
| KRH30432 | Soybean | nucleus | 37.22 | 23.33 |
| GSMUA_Achr10P... | Banana | nucleus | 34.95 | 22.88 |
| Bra018634.1-P | Field mustard | nucleus | 34.3 | 22.32 |
| CDX93571 | Canola | nucleus | 34.3 | 22.18 |
| CDX95068 | Canola | nucleus | 33.98 | 21.97 |
| Os05t0443900-01 | Rice | nucleus | 33.98 | 21.69 |
| CDY06309 | Canola | nucleus | 33.98 | 21.69 |
| Os01t0859500-01 | Rice | nucleus | 36.89 | 21.15 |
| HORVU1Hr1G073870.2 | Barley | nucleus | 35.28 | 20.84 |
| CDY22689 | Canola | nucleus | 28.8 | 20.79 |
| GSMUA_Achr3P25020_001 | Banana | nucleus | 22.33 | 20.78 |
| TraesCS1D01G276100.2 | Wheat | nucleus | 35.28 | 20.72 |
| TraesCS1B01G285800.1 | Wheat | nucleus | 35.28 | 20.72 |
| Solyc11g068370.1.1 | Tomato | nucleus | 24.92 | 20.7 |
| TraesCS1A01G276600.2 | Wheat | nucleus | 34.95 | 20.53 |
| KXG33735 | Sorghum | nucleus | 35.28 | 20.45 |
| Bra031622.1-P | Field mustard | nucleus | 28.16 | 20.33 |
| OQU78097 | Sorghum | nucleus | 34.3 | 20.31 |
| GSMUA_Achr8P05800_001 | Banana | nucleus | 21.68 | 20.18 |
| Zm00001d038296_P001 | Maize | nucleus | 33.66 | 20.04 |
| GSMUA_Achr5P26200_001 | Banana | nucleus | 25.89 | 19.7 |
| TraesCS3B01G404800.2 | Wheat | nucleus | 35.6 | 19.2 |
| Zm00001d012294_P009 | Maize | nucleus | 34.3 | 19.1 |
| GSMUA_Achr3P11150_001 | Banana | nucleus | 25.57 | 19.08 |
| HORVU3Hr1G084340.10 | Barley | nucleus | 34.95 | 18.98 |
| TraesCS3D01G365200.3 | Wheat | nucleus | 35.6 | 18.97 |
| GSMUA_Achr5P16630_001 | Banana | nucleus | 22.33 | 18.9 |
| TraesCS3A01G372400.2 | Wheat | nucleus | 34.95 | 18.85 |
| GSMUA_Achr9P27700_001 | Banana | nucleus | 22.65 | 18.67 |
| GSMUA_AchrUn_... | Banana | nucleus | 20.39 | 17.8 |
| GSMUA_Achr10P... | Banana | nucleus | 26.21 | 17.72 |
| Zm00001d042777_P006 | Maize | nucleus | 35.6 | 16.92 |
| GSMUA_Achr10P... | Banana | nucleus | 19.09 | 16.81 |
| GSMUA_Achr9P15550_001 | Banana | nucleus | 23.3 | 16.78 |
| GSMUA_Achr11P... | Banana | nucleus | 25.89 | 16.74 |
| GSMUA_Achr9P20200_001 | Banana | plastid | 26.54 | 14.99 |
| GSMUA_AchrUn_... | Banana | nucleus | 23.3 | 14.63 |
| PGSC0003DMT400067782 | Potato | nucleus | 15.21 | 14.29 |
| GSMUA_Achr8P21670_001 | Banana | nucleus | 24.92 | 13.23 |
| GSMUA_Achr11P... | Banana | cytosol | 2.91 | 3.72 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr11G26170_001 | EnsemblPlants:GSMUA_Achr11P26170_001 | EnsemblPlants:GSMUA_Achr11T26170_001 | InterPro:IPR004827 |
| UniProt:M0RVJ7 | PFAM:PF00170 | ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF215 |
| SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI0002967562 | InterPro:bZIP | SEG:seg | : |
Description
transcription factor, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G26170_001]
Coordinates
chr11:-:25034219..25037705
Molecular Weight (calculated)
34135.3 Da
IEP (calculated)
9.765
GRAVY (calculated)
-0.518
Length
309 amino acids
Sequence
(BLAST)
(BLAST)
001: MANHRVGETG LPDSGPSTRS LINGTIGNTP SATNFFDQEG AAYFGELEEA LMQGVDGLRE TEDRKSFIAT SPATLEIFPS WPMRFQQTPS VNTQSARSTD
101: SGAAQNSLSH LESDFPNSRK ASSDQSTNHK RPQEMMMASG ASRTEAARNP HPSSQEEVLF DCFVIHHLEK VWILVFASTL NMPLSFVYSW AFELATMVNV
201: RADISKQPFL RCMFQRKMTG STAARDGKVI DAKTLRRLAQ NREAAKKSRL KKKAYVQQLE SSRIKLQQLE QDLQRARSQG LLLGVAGGNA AISSGNEPHF
301: HPSISTRLS
101: SGAAQNSLSH LESDFPNSRK ASSDQSTNHK RPQEMMMASG ASRTEAARNP HPSSQEEVLF DCFVIHHLEK VWILVFASTL NMPLSFVYSW AFELATMVNV
201: RADISKQPFL RCMFQRKMTG STAARDGKVI DAKTLRRLAQ NREAAKKSRL KKKAYVQQLE SSRIKLQQLE QDLQRARSQG LLLGVAGGNA AISSGNEPHF
301: HPSISTRLS
001: MSSKHHLMLQ PHHNNMANSS STSGLPSTSR TLAPPKPSED KRKATTSGKQ LDAKTLRRLA QNREAARKSR LRKKAYVQQL ESSRIKLSQL EQELQRARSQ
101: GLFMGGCGPP GPNITSGAAI FDMEYGRWLE DDNRHMSEIR TGLQAHLSDN DLRLIVDGYI AHFDEIFRLK AVAAKADVFH LIIGTWMSPA ERCFIWMAGF
201: RPSDLIKILV SQMDLLTEQQ LMGIYSLQHS SQQAEEALSQ GLEQLQQSLI DTLAASPVID GMQQMAVALG KISNLEGFIR QADNLRQQTV HQLRRILTVR
301: QAARCFLVIG EYYGRLRALS SLWLSRPRET LMSDETSCQT TTDLQIVQSS RNHFSNF
101: GLFMGGCGPP GPNITSGAAI FDMEYGRWLE DDNRHMSEIR TGLQAHLSDN DLRLIVDGYI AHFDEIFRLK AVAAKADVFH LIIGTWMSPA ERCFIWMAGF
201: RPSDLIKILV SQMDLLTEQQ LMGIYSLQHS SQQAEEALSQ GLEQLQQSLI DTLAASPVID GMQQMAVALG KISNLEGFIR QADNLRQQTV HQLRRILTVR
301: QAARCFLVIG EYYGRLRALS SLWLSRPRET LMSDETSCQT TTDLQIVQSS RNHFSNF
Arabidopsis Description
TGA9Transcription factor TGA9 [Source:UniProtKB/Swiss-Prot;Acc:Q93XM6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.