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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG33735 Sorghum nucleus 80.33 81.24
TraesCS3B01G404800.2 Wheat nucleus 82.37 77.49
TraesCS3D01G365200.3 Wheat nucleus 83.12 77.24
TraesCS3A01G372400.2 Wheat nucleus 82.0 77.14
Zm00001d012294_P009 Maize nucleus 78.85 76.58
Os05t0443900-01 Rice nucleus 66.6 74.17
Zm00001d042777_P006 Maize nucleus 81.26 67.38
GSMUA_Achr11P... Banana cytosol 28.57 63.64
Solyc11g068370.1.1 Tomato nucleus 41.74 60.48
PGSC0003DMT400067782 Potato nucleus 36.36 59.57
HORVU3Hr1G084340.10 Barley nucleus 62.34 59.05
GSMUA_Achr11P... Banana nucleus 51.39 56.3
GSMUA_Achr10P... Banana nucleus 47.87 54.66
Bra031622.1-P Field mustard nucleus 43.23 54.44
CDY22689 Canola nucleus 43.23 54.44
GSMUA_Achr5P26200_001 Banana nucleus 41.0 54.43
Os01t0279900-01 Rice nucleus 33.21 54.41
VIT_06s0080g00360.t01 Wine grape nucleus 50.46 54.4
KRH26635 Soybean nucleus 48.61 53.69
KRH22685 Soybean nucleus 48.79 53.67
Solyc06g074320.2.1 Tomato nucleus 49.72 53.49
PGSC0003DMT400018306 Potato nucleus 48.42 53.48
Os03t0318600-01 Rice nucleus 32.84 53.15
Bra018634.1-P Field mustard nucleus 46.75 53.05
AT1G08320.4 Thale cress nucleus 46.94 52.6
CDX95068 Canola nucleus 46.57 52.51
Os07t0687700-01 Rice nucleus 32.47 52.4
CDX93571 Canola nucleus 46.38 52.3
KRH30432 Soybean nucleus 47.31 51.72
CDY06309 Canola nucleus 46.2 51.45
GSMUA_Achr3P22700_001 Banana nucleus 48.05 51.19
KRH25227 Soybean nucleus 47.5 51.1
Os11t0152700-01 Rice nucleus 45.83 51.03
Os12t0152900-01 Rice nucleus 45.27 49.9
Os05t0492000-00 Rice nucleus 28.39 46.36
Os10t0566200-00 Rice extracellular 10.02 45.76
Os06t0265400-01 Rice nucleus 31.54 44.16
Os01t0882200-00 Rice cytosol, extracellular 10.39 39.44
Os04t0637000-01 Rice nucleus 28.94 39.29
GSMUA_Achr11P... Banana nucleus 21.15 36.89
Os06t0614100-01 Rice nucleus 30.06 35.92
Os09t0280500-01 Rice nucleus 30.98 35.76
Os09t0489500-02 Rice nucleus 34.32 35.37
Os02t0194900-00 Rice nucleus 24.3 35.12
Os01t0808100-01 Rice nucleus 22.26 32.97
Os08t0176900-01 Rice nucleus 23.01 31.88
Os01t0859600-01 Rice cytosol 11.87 15.35
Protein Annotations
MapMan:15.5.4.1MapMan:15.5.4.7.1EntrezGene:4325063EMBL:AK101338ProteinID:BAD82019.1ProteinID:BAD82625.1
ProteinID:BAF06782.1ProteinID:BAS75328.1ncoils:CoilProteinID:EEE55708.1GO:GO:0003674GO:GO:0003676
GO:GO:0003677GO:GO:0003700GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0006950
GO:GO:0006952GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0043565
GO:GO:0045893InterPro:IPR004827InterPro:IPR025422EnsemblPlantsGene:Os01g0859500EnsemblPlants:Os01t0859500-01PFAM:PF00170
PFAM:PF14144ScanProsite:PS00036PFscan:PS50217PFscan:PS51806PANTHER:PTHR22952PANTHER:PTHR22952:SF215
UniProt:Q5N7C7SMART:SM00338SUPFAM:SSF57959InterPro:TGA_domainUniParc:UPI000049E93DRefSeq:XP_015616943.1
InterPro:bZIPSEG:seg::::
Description
LIGULELESS 2Similar to Basic leucine zipper protein (Liguleless2). (Os01t0859500-01)
Coordinates
chr1:-:37181505..37188288
Molecular Weight (calculated)
59542.1 Da
IEP (calculated)
6.967
GRAVY (calculated)
-0.536
Length
539 amino acids
Sequence
(BLAST)
001: MVQGEESSWR MAASTHHERA IPLNQALAYG VQAHASPSVA AAPPASFLDF QPAAAAAAYF GELEEALIHG ANAGGVVDPG MIRADVHSKS AAAAATAGYL
101: AARPPTLEIF PSWPMRQQQQ LHSGNSQSVG STTDSSSAQN TMPQMELVSP ASIRASSEHQ HQQQQPGQEV MMVTTDDYSY KPGLAAASPS FQQQHQLQHH
201: QQQQLHGGGD HDKRKHGSTR KDGKSVDAKT ERRLAQNREA ARKSRLRKKA YVQNLETSRV RLQQIEQELQ RARSQGLFLG GCRAAGDMSS GAAMFDMEYA
301: RWLDDDSKRL TDLRGGLQAH LLDTNLGLIV EECMQHYDEL FQLKAALARS DVFHLLTGTW ATPAERCFLW MGGFRPSDLL KILIQQLDPL TEQQMLGIYS
401: LQQSSEQAEE ALAQGLQQLH QSLADTVAAG TLNDGPGVPN YMSLMAIALD KLASLESFYQ QADNLRQQTL HQLRRILTTR QAARCFLSIG EYYRRLRALS
501: NLWSSRPREN FIGTESVSPT GTELQPMHNQ PQQNQYSGF
Best Arabidopsis Sequence Match ( AT1G08320.3 )
(BLAST)
001: MANHRMSEAT NHNHNHHLPY SLIHGLNNNH PSSGFINQDG SSSFDFGELE EAIVLQGVKY RNEEAKPPLL GGGGGATTLE MFPSWPIRTH QTLPTESSKS
101: GGESSDSGSA NFSGKAESQQ PESPMSSKHH LMLQPHHNNM ANSSSTSGLP STSRTLAPPK PSEDKRKATT SGKQLDAKTL RRLAQNREAA RKSRLRKKAY
201: VQQLESSRIK LSQLEQELQR ARSQGLFMGG CGPPGPNITS GAAIFDMEYG RWLEDDNRHM SEIRTGLQAH LSDNDLRLIV DGYIAHFDEI FRLKAVAAKA
301: DVFHLIIGTW MSPAERCFIW MAGFRPSDLI KILVSQMDLL TEQQLMGIYS LQHSSQQAEE ALSQGLEQLQ QSLIDTLAAS PVIDGMQQMA VALGKISNLE
401: GFIRQADNLR QQTVHQLRRI LTVRQAARCF LVIGEYYGRL RALSSLWLSR PRETLMSDET SCQTTTDLQI VQSSRNHFSN F
Arabidopsis Description
TGA9Transcription factor TGA9 [Source:UniProtKB/Swiss-Prot;Acc:Q93XM6]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.