Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KXG33735 | Sorghum | nucleus | 80.33 | 81.24 |
TraesCS3B01G404800.2 | Wheat | nucleus | 82.37 | 77.49 |
TraesCS3D01G365200.3 | Wheat | nucleus | 83.12 | 77.24 |
TraesCS3A01G372400.2 | Wheat | nucleus | 82.0 | 77.14 |
Zm00001d012294_P009 | Maize | nucleus | 78.85 | 76.58 |
Os05t0443900-01 | Rice | nucleus | 66.6 | 74.17 |
Zm00001d042777_P006 | Maize | nucleus | 81.26 | 67.38 |
GSMUA_Achr11P... | Banana | cytosol | 28.57 | 63.64 |
Solyc11g068370.1.1 | Tomato | nucleus | 41.74 | 60.48 |
PGSC0003DMT400067782 | Potato | nucleus | 36.36 | 59.57 |
HORVU3Hr1G084340.10 | Barley | nucleus | 62.34 | 59.05 |
GSMUA_Achr11P... | Banana | nucleus | 51.39 | 56.3 |
GSMUA_Achr10P... | Banana | nucleus | 47.87 | 54.66 |
Bra031622.1-P | Field mustard | nucleus | 43.23 | 54.44 |
CDY22689 | Canola | nucleus | 43.23 | 54.44 |
GSMUA_Achr5P26200_001 | Banana | nucleus | 41.0 | 54.43 |
Os01t0279900-01 | Rice | nucleus | 33.21 | 54.41 |
VIT_06s0080g00360.t01 | Wine grape | nucleus | 50.46 | 54.4 |
KRH26635 | Soybean | nucleus | 48.61 | 53.69 |
KRH22685 | Soybean | nucleus | 48.79 | 53.67 |
Solyc06g074320.2.1 | Tomato | nucleus | 49.72 | 53.49 |
PGSC0003DMT400018306 | Potato | nucleus | 48.42 | 53.48 |
Os03t0318600-01 | Rice | nucleus | 32.84 | 53.15 |
Bra018634.1-P | Field mustard | nucleus | 46.75 | 53.05 |
AT1G08320.4 | Thale cress | nucleus | 46.94 | 52.6 |
CDX95068 | Canola | nucleus | 46.57 | 52.51 |
Os07t0687700-01 | Rice | nucleus | 32.47 | 52.4 |
CDX93571 | Canola | nucleus | 46.38 | 52.3 |
KRH30432 | Soybean | nucleus | 47.31 | 51.72 |
CDY06309 | Canola | nucleus | 46.2 | 51.45 |
GSMUA_Achr3P22700_001 | Banana | nucleus | 48.05 | 51.19 |
KRH25227 | Soybean | nucleus | 47.5 | 51.1 |
Os11t0152700-01 | Rice | nucleus | 45.83 | 51.03 |
Os12t0152900-01 | Rice | nucleus | 45.27 | 49.9 |
Os05t0492000-00 | Rice | nucleus | 28.39 | 46.36 |
Os10t0566200-00 | Rice | extracellular | 10.02 | 45.76 |
Os06t0265400-01 | Rice | nucleus | 31.54 | 44.16 |
Os01t0882200-00 | Rice | cytosol, extracellular | 10.39 | 39.44 |
Os04t0637000-01 | Rice | nucleus | 28.94 | 39.29 |
GSMUA_Achr11P... | Banana | nucleus | 21.15 | 36.89 |
Os06t0614100-01 | Rice | nucleus | 30.06 | 35.92 |
Os09t0280500-01 | Rice | nucleus | 30.98 | 35.76 |
Os09t0489500-02 | Rice | nucleus | 34.32 | 35.37 |
Os02t0194900-00 | Rice | nucleus | 24.3 | 35.12 |
Os01t0808100-01 | Rice | nucleus | 22.26 | 32.97 |
Os08t0176900-01 | Rice | nucleus | 23.01 | 31.88 |
Os01t0859600-01 | Rice | cytosol | 11.87 | 15.35 |
Protein Annotations
MapMan:15.5.4.1 | MapMan:15.5.4.7.1 | EntrezGene:4325063 | EMBL:AK101338 | ProteinID:BAD82019.1 | ProteinID:BAD82625.1 |
ProteinID:BAF06782.1 | ProteinID:BAS75328.1 | ncoils:Coil | ProteinID:EEE55708.1 | GO:GO:0003674 | GO:GO:0003676 |
GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 |
GO:GO:0006952 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
GO:GO:0045893 | InterPro:IPR004827 | InterPro:IPR025422 | EnsemblPlantsGene:Os01g0859500 | EnsemblPlants:Os01t0859500-01 | PFAM:PF00170 |
PFAM:PF14144 | ScanProsite:PS00036 | PFscan:PS50217 | PFscan:PS51806 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF215 |
UniProt:Q5N7C7 | SMART:SM00338 | SUPFAM:SSF57959 | InterPro:TGA_domain | UniParc:UPI000049E93D | RefSeq:XP_015616943.1 |
InterPro:bZIP | SEG:seg | : | : | : | : |
Description
LIGULELESS 2Similar to Basic leucine zipper protein (Liguleless2). (Os01t0859500-01)
Coordinates
chr1:-:37181505..37188288
Molecular Weight (calculated)
59542.1 Da
IEP (calculated)
6.967
GRAVY (calculated)
-0.536
Length
539 amino acids
Sequence
(BLAST)
(BLAST)
001: MVQGEESSWR MAASTHHERA IPLNQALAYG VQAHASPSVA AAPPASFLDF QPAAAAAAYF GELEEALIHG ANAGGVVDPG MIRADVHSKS AAAAATAGYL
101: AARPPTLEIF PSWPMRQQQQ LHSGNSQSVG STTDSSSAQN TMPQMELVSP ASIRASSEHQ HQQQQPGQEV MMVTTDDYSY KPGLAAASPS FQQQHQLQHH
201: QQQQLHGGGD HDKRKHGSTR KDGKSVDAKT ERRLAQNREA ARKSRLRKKA YVQNLETSRV RLQQIEQELQ RARSQGLFLG GCRAAGDMSS GAAMFDMEYA
301: RWLDDDSKRL TDLRGGLQAH LLDTNLGLIV EECMQHYDEL FQLKAALARS DVFHLLTGTW ATPAERCFLW MGGFRPSDLL KILIQQLDPL TEQQMLGIYS
401: LQQSSEQAEE ALAQGLQQLH QSLADTVAAG TLNDGPGVPN YMSLMAIALD KLASLESFYQ QADNLRQQTL HQLRRILTTR QAARCFLSIG EYYRRLRALS
501: NLWSSRPREN FIGTESVSPT GTELQPMHNQ PQQNQYSGF
101: AARPPTLEIF PSWPMRQQQQ LHSGNSQSVG STTDSSSAQN TMPQMELVSP ASIRASSEHQ HQQQQPGQEV MMVTTDDYSY KPGLAAASPS FQQQHQLQHH
201: QQQQLHGGGD HDKRKHGSTR KDGKSVDAKT ERRLAQNREA ARKSRLRKKA YVQNLETSRV RLQQIEQELQ RARSQGLFLG GCRAAGDMSS GAAMFDMEYA
301: RWLDDDSKRL TDLRGGLQAH LLDTNLGLIV EECMQHYDEL FQLKAALARS DVFHLLTGTW ATPAERCFLW MGGFRPSDLL KILIQQLDPL TEQQMLGIYS
401: LQQSSEQAEE ALAQGLQQLH QSLADTVAAG TLNDGPGVPN YMSLMAIALD KLASLESFYQ QADNLRQQTL HQLRRILTTR QAARCFLSIG EYYRRLRALS
501: NLWSSRPREN FIGTESVSPT GTELQPMHNQ PQQNQYSGF
001: MANHRMSEAT NHNHNHHLPY SLIHGLNNNH PSSGFINQDG SSSFDFGELE EAIVLQGVKY RNEEAKPPLL GGGGGATTLE MFPSWPIRTH QTLPTESSKS
101: GGESSDSGSA NFSGKAESQQ PESPMSSKHH LMLQPHHNNM ANSSSTSGLP STSRTLAPPK PSEDKRKATT SGKQLDAKTL RRLAQNREAA RKSRLRKKAY
201: VQQLESSRIK LSQLEQELQR ARSQGLFMGG CGPPGPNITS GAAIFDMEYG RWLEDDNRHM SEIRTGLQAH LSDNDLRLIV DGYIAHFDEI FRLKAVAAKA
301: DVFHLIIGTW MSPAERCFIW MAGFRPSDLI KILVSQMDLL TEQQLMGIYS LQHSSQQAEE ALSQGLEQLQ QSLIDTLAAS PVIDGMQQMA VALGKISNLE
401: GFIRQADNLR QQTVHQLRRI LTVRQAARCF LVIGEYYGRL RALSSLWLSR PRETLMSDET SCQTTTDLQI VQSSRNHFSN F
101: GGESSDSGSA NFSGKAESQQ PESPMSSKHH LMLQPHHNNM ANSSSTSGLP STSRTLAPPK PSEDKRKATT SGKQLDAKTL RRLAQNREAA RKSRLRKKAY
201: VQQLESSRIK LSQLEQELQR ARSQGLFMGG CGPPGPNITS GAAIFDMEYG RWLEDDNRHM SEIRTGLQAH LSDNDLRLIV DGYIAHFDEI FRLKAVAAKA
301: DVFHLIIGTW MSPAERCFIW MAGFRPSDLI KILVSQMDLL TEQQLMGIYS LQHSSQQAEE ALSQGLEQLQ QSLIDTLAAS PVIDGMQQMA VALGKISNLE
401: GFIRQADNLR QQTVHQLRRI LTVRQAARCF LVIGEYYGRL RALSSLWLSR PRETLMSDET SCQTTTDLQI VQSSRNHFSN F
Arabidopsis Description
TGA9Transcription factor TGA9 [Source:UniProtKB/Swiss-Prot;Acc:Q93XM6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.