Factsheet for Os09t0280500-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G178800.1	Wheat	nucleus	70.66	70.82
TraesCS5A01G174200.1	Wheat	nucleus	70.45	70.45
OQU89155	Sorghum	nucleus	64.03	70.35
Zm00001d005143_P001	Maize	nucleus	58.46	66.42
HORVU5Hr1G053330.5	Barley	nucleus	70.24	65.08
Os03t0318600-01	Rice	nucleus	35.33	49.55
Os07t0687700-01	Rice	nucleus	34.69	48.5
Os01t0279900-01	Rice	nucleus	33.62	47.72
Os05t0492000-00	Rice	nucleus	31.91	45.15
Os09t0489500-02	Rice	nucleus	48.18	43.02
Os06t0614100-01	Rice	nucleus	41.54	43.02
Os06t0265400-01	Rice	nucleus	33.19	40.26
Os10t0566200-00	Rice	extracellular	9.85	38.98
Os12t0152900-01	Rice	nucleus	37.69	35.99
Os11t0152700-01	Rice	nucleus	37.05	35.74
Os02t0194900-00	Rice	nucleus	27.84	34.85
Os04t0637000-01	Rice	nucleus	29.12	34.26
Os01t0882200-00	Rice	cytosol, extracellular	10.28	33.8
Os05t0443900-01	Rice	nucleus	34.48	33.26
Os01t0859500-01	Rice	nucleus	35.76	30.98
Os08t0176900-01	Rice	nucleus	25.27	30.33
Os01t0808100-01	Rice	nucleus	22.7	29.12
Os01t0859600-01	Rice	cytosol	10.28	11.51

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	MapMan:15.5.4.7.1	EntrezGene:4346610	EMBL:AK106988	ProteinID:BAD26515.1
ProteinID:BAF24679.1	ProteinID:BAT07221.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0006950	GO:GO:0006952
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR004827
InterPro:IPR025422	EnsemblPlantsGene:Os09g0280500	EnsemblPlants:Os09t0280500-01	PFAM:PF00170	PFAM:PF14144	ScanProsite:PS00036
PFscan:PS50217	PFscan:PS51806	PANTHER:PTHR22952	PANTHER:PTHR22952:SF179	UniProt:Q6H434	SMART:SM00338
SUPFAM:SSF57959	InterPro:TGA_domain	UniParc:UPI00003B4726	RefSeq:XP_015651203.1	InterPro:bZIP	SEG:seg

Description

b-ZIP TRANSCRIPTION FACTOR 70Similar to Transcription factor HBP-1b(C38) (Fragment). (Os09t0280500-01)

Coordinates

chr9:+:5918077..5929773

Molecular Weight (calculated)

51346.1 Da

IEP (calculated)

8.174

GRAVY (calculated)

-0.505

Length

467 amino acids

Sequence
(BLAST)

001: MGGSREEDRQ HHNHLPSELP LGFRSSSPTT MIASSSMSKE SSNYDMADFD QASLFLYLDS HDQQSIQEQR QTLNIFPSQP MHVADPAHEA KSAGVAMAML
101: PNGNQLQVLP SHPSKKPDQQ GGQKINSSVP TNPPGPNLPL PNSAKDNKNS SLIKKEGSSS GKGATTSNDP EREGRRTLDP KTLRRLAQNR EAARKSRLRK
201: KAYIQQLESS RIRLSQLEQQ VHVARVQGAM LGAGDQHQGL PSGPSAASLF DLEYGRWVEE HSKLIFQLRA ALNEQMADSQ LQVFVNGAMA QHDELLSLKG
301: AIARADIFHL LCGVWATPAE RCFLWLGGFR PSEAIKVMLK QVEPLSEGQL MSIYELQQAA KGTEDALSHA MDGLQQSLSD TVAAPDVAAA GGFMGHMSLA
401: MNKISAMEDI VRQADGLRQQ TLHKLQHMLT IRQAARCFVA ISDYFHRLRA LSTLWVARPR PEEGPAM

Best Arabidopsis Sequence Match ( AT5G06839.3 )
(BLAST)

001: MQGHHQNHHQ HLSSSSATSS HGNFMNKDGY DIGEIDPSLF LYLDGQGHHD PPSTAPSPLH HHHTTQNLAM RPPTSTLNIF PSQPMHIEPP PSSTHNTDNT
101: RLVPAAQPSG STRPASDPSM DLTNHSQFHQ PPQGSKSIKK EGNRKGLASS DHDIPKSSDP KTLRRLAQNR EAARKSRLRK KAYVQQLESC RIKLTQLEQE
201: IQRARSQGVF FGGSLIGGDQ QQGGLPIGPG NISSEAAVFD MEYARWLEEQ QRLLNELRVA TQEHLSENEL RMFVDTCLAH YDHLINLKAM VAKTDVFHLI
301: SGAWKTPAER CFLWMGGFRP SEIIKVIVNQ IEPLTEQQIV GICGLQQSTQ EAEEALSQGL EALNQSLSDS IVSDSLPPAS APLPPHLSNF MSHMSLALNK
401: LSALEGFVLQ ADNLRHQTIH RLNQLLTTRQ EARCLLAVAE YFHRLQALSS LWLARPRQDG

Arabidopsis Description

TGA10Transcription factor TGA10 [Source:UniProtKB/Swiss-Prot;Acc:E3VNM4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.