Factsheet for HORVU5Hr1G053330.5

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G178800.1	Wheat	nucleus	87.3	94.42
TraesCS5A01G174200.1	Wheat	nucleus	87.3	94.22
Os09t0280500-01	Rice	nucleus	65.08	70.24
OQU89155	Sorghum	nucleus	56.35	66.82
Zm00001d005143_P001	Maize	nucleus	50.99	62.53
HORVU3Hr1G042790.4	Barley	nucleus	29.17	44.41
HORVU4Hr1G052330.3	Barley	nucleus	29.37	44.31
HORVU0Hr1G015710.1	Barley	nucleus	39.88	43.7
HORVU2Hr1G016580.5	Barley	nucleus	28.57	42.73
HORVU4Hr1G025130.10	Barley	nucleus	29.96	41.6
HORVU3Hr1G042830.1	Barley	cytosol, mitochondrion, nucleus, plastid	11.9	40.27
HORVU5Hr1G073410.1	Barley	nucleus	42.86	38.1
HORVU2Hr1G116130.4	Barley	nucleus	9.72	36.84
HORVU7Hr1G042180.5	Barley	nucleus	27.18	36.34
HORVU1Hr1G068220.1	Barley	nucleus	23.61	34.69
HORVU3Hr1G079010.5	Barley	nucleus	30.56	32.29
HORVU1Hr1G073870.2	Barley	nucleus	31.75	30.59
HORVU0Hr1G032230.4	Barley	nucleus	20.24	29.06
HORVU3Hr1G084340.10	Barley	nucleus	23.02	20.39
HORVU2Hr1G116090.2	Barley	cytosol	16.27	19.39

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	MapMan:15.5.4.7.1	UniProt:A0A287R8J2	ncoils:Coil	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565
EnsemblPlantsGene:HORVU5Hr1G053330	EnsemblPlants:HORVU5Hr1G053330.5	InterPro:IPR004827	InterPro:IPR025422	PFAM:PF00170	PFAM:PF14144
ScanProsite:PS00036	PFscan:PS50217	PFscan:PS51806	PANTHER:PTHR22952	PANTHER:PTHR22952:SF179	SMART:SM00338
SUPFAM:SSF57959	InterPro:TGA_domain	UniParc:UPI000B47F64E	InterPro:bZIP	SEG:seg	:

Description

No Description!

Coordinates

chrchr5H:-:418239536..418248429

Molecular Weight (calculated)

55762.3 Da

IEP (calculated)

8.208

GRAVY (calculated)

-0.540

Length

504 amino acids

Sequence
(BLAST)

001: ILYPFARDVH SVKRERERER ERDEVEDGQG LHKGFMGGIR EEDHHHHPPS ELPLGFRSAM PPPMIASSSM SKESTSYDMA DFDQTAIFLY LDGHDPQSIQ
101: EQRQTLNIFP SQPMHAAEAL NPAAKINGGT VMAAMLANGG NPQQPSPKRP VQQQQLLLQG APGGSNAAPS LPSSAKDNKN SASLVKKEGT SSGKGATSSS
201: TDPDREGSRR TQDPKTLRRL AQNREAARKS RLRKKAYIQQ LETSRIRLSQ IEQQVQAGRV QQGVLLGTGD HHHQGLPSAP SFASMFDMEY GRWVEEHSKL
301: IFQLRALLND NAPDNQVQVL VGGAMAHHEE LLSLKAAIAR TDIFHLLCGV WASPAERCFL WLGGFRPTEV IKIMLKQVES LSEGQLLGIY NLQRWVQETE
401: ESLNHTMGTL QHSLSDTIAS PEAAGGNFMG HMSLALNKIS SMEAIVRQAD ALRQQTLHKL HGMLTVRQVA HCFVAIADYF HRLRAVSSLW ASRPRHDEQG
501: PPAP

Best Arabidopsis Sequence Match ( AT1G08320.3 )
(BLAST)

001: MANHRMSEAT NHNHNHHLPY SLIHGLNNNH PSSGFINQDG SSSFDFGELE EAIVLQGVKY RNEEAKPPLL GGGGGATTLE MFPSWPIRTH QTLPTESSKS
101: GGESSDSGSA NFSGKAESQQ PESPMSSKHH LMLQPHHNNM ANSSSTSGLP STSRTLAPPK PSEDKRKATT SGKQLDAKTL RRLAQNREAA RKSRLRKKAY
201: VQQLESSRIK LSQLEQELQR ARSQGLFMGG CGPPGPNITS GAAIFDMEYG RWLEDDNRHM SEIRTGLQAH LSDNDLRLIV DGYIAHFDEI FRLKAVAAKA
301: DVFHLIIGTW MSPAERCFIW MAGFRPSDLI KILVSQMDLL TEQQLMGIYS LQHSSQQAEE ALSQGLEQLQ QSLIDTLAAS PVIDGMQQMA VALGKISNLE
401: GFIRQADNLR QQTVHQLRRI LTVRQAARCF LVIGEYYGRL RALSSLWLSR PRETLMSDET SCQTTTDLQI VQSSRNHFSN F

Arabidopsis Description

TGA9Transcription factor TGA9 [Source:UniProtKB/Swiss-Prot;Acc:Q93XM6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.