Factsheet for HORVU0Hr1G015710.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G193200.2	Wheat	nucleus	95.0	95.41
TraesCS6D01G154400.1	Wheat	nucleus	95.65	94.42
TraesCS6A01G165800.1	Wheat	nucleus	95.0	93.78
KXG29702	Sorghum	nucleus	65.65	61.89
Zm00001d015845_P001	Maize	cytosol	35.43	60.59
Os02t0194900-00	Rice	nucleus	45.87	56.57
Zm00001d015846_P001	Maize	nucleus	22.61	51.49
HORVU3Hr1G042790.4	Barley	nucleus	31.52	43.81
HORVU4Hr1G052330.3	Barley	nucleus	31.09	42.81
HORVU3Hr1G042830.1	Barley	cytosol, mitochondrion, nucleus, plastid	13.48	41.61
HORVU4Hr1G025130.10	Barley	nucleus	32.83	41.6
HORVU2Hr1G016580.5	Barley	nucleus	30.22	41.25
HORVU5Hr1G053330.5	Barley	nucleus	43.7	39.88
HORVU7Hr1G042180.5	Barley	nucleus	30.0	36.6
HORVU5Hr1G073410.1	Barley	nucleus	43.91	35.63
HORVU3Hr1G079010.5	Barley	nucleus	35.22	33.96
HORVU2Hr1G116130.4	Barley	nucleus	9.78	33.83
HORVU1Hr1G068220.1	Barley	nucleus	24.57	32.94
HORVU1Hr1G073870.2	Barley	nucleus	34.78	30.59
HORVU0Hr1G032230.4	Barley	nucleus	21.52	28.21
HORVU3Hr1G084340.10	Barley	nucleus	28.48	23.02
HORVU2Hr1G116090.2	Barley	cytosol	19.13	20.8

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	MapMan:15.5.4.7.1	EMBL:AK368931	ncoils:Coil	UniProt:F2DYG2
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	EnsemblPlantsGene:HORVU0Hr1G015710	EnsemblPlants:HORVU0Hr1G015710.1	InterPro:IPR004827	InterPro:IPR025422	PFAM:PF00170
PFAM:PF14144	ScanProsite:PS00036	PFscan:PS50217	PFscan:PS51806	PANTHER:PTHR22952	PANTHER:PTHR22952:SF370
SMART:SM00338	SUPFAM:SSF57959	InterPro:TGA_domain	UniParc:UPI0002007B44	InterPro:bZIP	SEG:seg

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DYG2]

Coordinates

chrchrUn:-:84868899..84881072

Molecular Weight (calculated)

50158.2 Da

IEP (calculated)

7.759

GRAVY (calculated)

-0.469

Length

460 amino acids

Sequence
(BLAST)

001: MGDRPWQQPH EHASCSAQAG MIQASTAATS SIHGSIMRKD PGGYEDLAEL DQALFLYINS QDQQPIQEQP QTLNIFPSRP MHVVAEPSPK AATSASNIIA
101: ASSNLKLQRP PSNSKQSSMP APGGKATVKR EGSGSGGAGT PSTSEHEGPR TPDAKTLRRL AQNREAARKS RLRKKAYIQN LETSRVRLSQ MEQEMQRCSA
201: QGAILGGGAG IGGLSPEAAW FDGEYARWVD EHDRMMRHLR AAVDAEGVEH DAAAADGEQL LRQLIDAAAA HHVVLAELKS AVARADVFHL VSGTWLPAAE
301: RCFIWIGGSR PSDLIKVMAR HMEPVTEQQA AGMYDVQRWA QEREEALDRE LQATYRSLSD TVSSDALISP YPDTAAYMAH MSLAISNLSS LEAFVRQADA
401: LRLQTLHRLP QVLTARQSAR CFLAVADYSQ RLRALSSLWL ARPRQDQPAQ PGAGGRLFHP

Best Arabidopsis Sequence Match ( AT1G08320.2 )
(BLAST)

001: MSSKHHLMLQ PHHNNMANSS STSGLPSTSR TLAPPKPSED KRKATTSGKQ LDAKTLRRLA QNREAARKSR LRKKAYVQQL ESSRIKLSQL EQELQRARSQ
101: GLFMGGCGPP GPNITSGAAI FDMEYGRWLE DDNRHMSEIR TGLQAHLSDN DLRLIVDGYI AHFDEIFRLK AVAAKADVFH LIIGTWMSPA ERCFIWMAGF
201: RPSDLIKILV SQMDLLTEQQ LMGIYSLQHS SQQAEEALSQ GLEQLQQSLI DTLAASPVID GMQQMAVALG KISNLEGFIR QADNLRQQTV HQLRRILTVR
301: QAARCFLVIG EYYGRLRALS SLWLSRPRET LMSDETSCQT TTDLQIVQSS RNHFSNF

Arabidopsis Description

TGA9Transcription factor TGA9 [Source:UniProtKB/Swiss-Prot;Acc:Q93XM6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.