Factsheet for HORVU7Hr1G042180.5

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G003840.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G68640.1	HORVU0Hr1G003840.1	AT3G02000.1	19218396

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G209800.1	Wheat	nucleus	92.84	78.12
TraesCS7B01G114300.1	Wheat	nucleus	92.31	77.68
TraesCS7A01G207100.1	Wheat	nucleus	90.98	77.43
Os06t0265400-01	Rice	nucleus	77.19	75.58
HORVU3Hr1G042830.1	Barley	cytosol, mitochondrion, nucleus, plastid	27.85	70.47
Os10t0566200-00	Rice	extracellular	21.75	69.49
HORVU3Hr1G042790.4	Barley	nucleus	57.56	65.56
HORVU4Hr1G052330.3	Barley	nucleus	53.32	60.18
Os01t0882200-00	Rice	cytosol, extracellular	22.55	59.86
Zm00001d037316_P008	Maize	cytosol, nucleus, peroxisome, plastid	51.99	57.82
HORVU2Hr1G016580.5	Barley	nucleus	51.46	57.57
GSMUA_Achr9P15550_001	Banana	nucleus	63.66	55.94
Zm00001d037317_P003	Maize	nucleus	63.93	55.79
VIT_01s0011g03230.t01	Wine grape	nucleus	63.66	52.98
OQU76203	Sorghum	nucleus	63.4	51.73
CDY38608	Canola	nucleus	55.97	47.74
Bra004329.1-P	Field mustard	nucleus	55.7	47.62
HORVU3Hr1G079010.5	Barley	nucleus	60.21	47.59
Solyc05g009660.2.1	Tomato	nucleus	61.01	47.52
CDX95999	Canola	nucleus	55.7	47.51
PGSC0003DMT400033741	Potato	nucleus	60.74	47.41
KRH35977	Soybean	nucleus	56.76	46.93
AT1G68640.1	Thale cress	nucleus	55.97	46.68
KRG90784	Soybean	nucleus	55.97	46.37
HORVU1Hr1G068220.1	Barley	nucleus	40.85	44.9
KRH70569	Soybean	nucleus	54.38	43.9
HORVU4Hr1G025130.10	Barley	nucleus	42.18	43.8
KRH75411	Soybean	nucleus	56.23	43.62
HORVU2Hr1G116130.4	Barley	nucleus	13.26	37.59
HORVU0Hr1G032230.4	Barley	nucleus	31.3	33.62
HORVU0Hr1G015710.1	Barley	nucleus	36.6	30.0
HORVU1Hr1G073870.2	Barley	nucleus	40.58	29.25
HORVU5Hr1G053330.5	Barley	nucleus	36.34	27.18
HORVU5Hr1G073410.1	Barley	nucleus	40.58	26.98
HORVU2Hr1G116090.2	Barley	cytosol	28.91	25.77
HORVU3Hr1G084340.10	Barley	nucleus	29.71	19.68

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	MapMan:15.5.4.7.1	UniProt:A0A287W7P0	ncoils:Coil	GO:GO:0000003
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009791	GO:GO:0009908
GO:GO:0009909	GO:GO:0009987	GO:GO:0043565	EnsemblPlantsGene:HORVU7Hr1G042180	EnsemblPlants:HORVU7Hr1G042180.5	InterPro:IPR004827
InterPro:IPR025422	PFAM:PF00170	PFAM:PF14144	ScanProsite:PS00036	PFscan:PS50217	PFscan:PS51806
PANTHER:PTHR22952	PANTHER:PTHR22952:SF371	SMART:SM00338	SUPFAM:SSF57959	InterPro:TGA_domain	UniParc:UPI000B47274C
InterPro:bZIP	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr7H:-:120981745..120986349

Molecular Weight (calculated)

40601.4 Da

IEP (calculated)

7.378

GRAVY (calculated)

-0.236

Length

377 amino acids

Sequence
(BLAST)

001: MAAPGMALAA AEADRFCLPR AAAQQFENWG DSVSGIVVSS PLTETSTDLG DSGEKHHALM GCGGGAGTGA GGGAHSQRRV GCVDSSERTG DEKTARRLAQ
101: NREAARKSRI RKKAYLSQLE TSRSKLTHLE QELQRHLSQG IFIAGGGSGD CSSGGALAFD LEYARWLDDH QRHINNLRVA VIADISDDEL RILVESVLLH
201: HDEFFRLKNL ATKADVFHVL SGMWMSPAER FFMWLGGFRS SEILKVLASH LEPLTDQQLM GICNLQQSSQ QXXXXLSQGM EALQQALAET LAAAAGGGPL
301: AGADNVTNYM GQMAIAMGKL STLENFLRQG DLLRQQTLQQ MHRILTTRQA ARALLVISDY FSRLRALSSL WLARPRD

Best Arabidopsis Sequence Match ( AT1G68640.1 )
(BLAST)

001: MQSSFKTVPF TPDFYSQSSY FFRGDSCLEE FHQPVNGFHH EEAIDLSPNV TIASANLHYT TFDTVMDCGG GGGGGLRERL EGGEEECLDT GQLVYQKGTR
101: LVGGGVGEVN SSWCDSVSAM ADNSQHTDTS TDIDTDDKTQ LNGGHQGMLL ATNCSDQSNV KSSDQRTLRR LAQNREAARK SRLRKKAYVQ QLENSRIRLA
201: QLEEELKRAR QQGSLVERGV SADHTHLAAG NGVFSFELEY TRWKEEHQRM INDLRSGVNS QLGDNDLRVL VDAVMSHYDE IFRLKGIGTK VDVFHMLSGM
301: WKTPAERFFM WLGGFRSSEL LKILGNHVDP LTDQQLIGIC NLQQSSQQAE DALSQGMEAL QQSLLETLSS ASMGPNSSAN VADYMGHMAM AMGKLGTLEN
401: FLRQADLLRQ QTLQQLHRIL TTRQAARAFL VIHDYISRLR ALSSLWLARP RD

Arabidopsis Description

PANTranscription factor PERIANTHIA [Source:UniProtKB/Swiss-Prot;Acc:Q9SX27]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.