Factsheet for Os06t0265400-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0512400-01
Os04t0393500-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G68640.1	Os02t0512400-01	AT3G02000.1	19218396
AT1G68640.1	Os04t0393500-01	AT3G02000.1	19218396

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0566200-00	Rice	extracellular	24.42	79.66
HORVU7Hr1G042180.5	Barley	nucleus	75.58	77.19
Os01t0279900-01	Rice	nucleus	58.18	68.09
Os01t0882200-00	Rice	cytosol, extracellular	24.94	67.61
TraesCS7D01G209800.1	Wheat	nucleus	77.4	66.52
TraesCS7A01G207100.1	Wheat	nucleus	76.36	66.37
TraesCS7B01G114300.1	Wheat	nucleus	76.62	65.85
Os03t0318600-01	Rice	nucleus	56.62	65.47
Os07t0687700-01	Rice	nucleus	56.36	64.97
GSMUA_Achr9P15550_001	Banana	nucleus	68.57	61.54
Zm00001d037316_P008	Maize	cytosol, nucleus, peroxisome, plastid	53.77	61.06
Zm00001d037317_P003	Maize	nucleus	65.71	58.56
VIT_01s0011g03230.t01	Wine grape	nucleus	66.75	56.73
Os05t0492000-00	Rice	nucleus	46.75	54.55
OQU76203	Sorghum	nucleus	64.94	54.11
CDY38608	Canola	nucleus	59.48	51.81
Bra004329.1-P	Field mustard	nucleus	59.22	51.7
CDX95999	Canola	nucleus	59.22	51.58
KRH35977	Soybean	nucleus	61.04	51.54
KRG90784	Soybean	nucleus	60.52	51.21
AT1G68640.1	Thale cress	nucleus	59.74	50.88
Solyc05g009660.2.1	Tomato	nucleus	63.9	50.83
PGSC0003DMT400033741	Potato	nucleus	63.38	50.52
KRH70569	Soybean	nucleus	59.74	49.25
KRH75411	Soybean	nucleus	61.3	48.56
Os04t0637000-01	Rice	nucleus	43.12	41.81
Os01t0808100-01	Rice	nucleus	36.36	38.46
Os11t0152700-01	Rice	nucleus	44.42	35.33
Os12t0152900-01	Rice	nucleus	44.16	34.76
Os05t0443900-01	Rice	nucleus	42.86	34.09
Os09t0280500-01	Rice	nucleus	40.26	33.19
Os08t0176900-01	Rice	nucleus	32.99	32.65
Os06t0614100-01	Rice	nucleus	37.66	32.15
Os09t0489500-02	Rice	nucleus	43.64	32.12
Os01t0859500-01	Rice	nucleus	44.16	31.54
Os02t0194900-00	Rice	nucleus	30.39	31.37
Os01t0859600-01	Rice	cytosol	15.06	13.91

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	MapMan:15.5.4.7.1	MapMan:26.8.3.1.2	EMBL:AK109719	ProteinID:BAD54380.1
ProteinID:BAF19256.1	ProteinID:BAS97148.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0006950	GO:GO:0006952	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR004827	InterPro:IPR025422
EnsemblPlantsGene:Os06g0265400	EnsemblPlants:Os06t0265400-01	PFAM:PF00170	PFAM:PF14144	ScanProsite:PS00036	PFscan:PS50217
PFscan:PS51806	PANTHER:PTHR22952	PANTHER:PTHR22952:SF371	UniProt:Q5Z6N9	SMART:SM00338	SUPFAM:SSF57959
InterPro:TGA_domain	UniParc:UPI000044700B	InterPro:bZIP	SEG:seg	:	:

Description

b-ZIP TRANSCRIPTION FACTOR 47Similar to Transcription factor HBP-1b(C38) (Fragment). (Os06t0265400-01)

Coordinates

chr6:-:8785882..8788413

Molecular Weight (calculated)

42335.2 Da

IEP (calculated)

6.631

GRAVY (calculated)

-0.366

Length

385 amino acids

Sequence
(BLAST)

001: MAAHQGMAAA TAADRFCLPR MAAAAAAASQ VENWGDSGVI VSSPFTDDTS TDLDDSADKH HLHALVGGGD GGDDAGEQRG ADSSAVSKER RGDQKMQRRL
101: AQNREAARKS RMRKKAYIQQ LESSRSKLMH LEQELQRARQ QGIFIATGGS GDHGHSIGGN GTLAFDLEYA RWLDEHQRHI NDLRVALNAQ MSDDELCELV
201: DAVMMHYDQV FRLKSFATKS DVFHVLSGMW MSPAERFFMW LGGFRSSELL KVLASHLEPL TDQQLMGICN LQQSSQQAED ALSQGMEALQ QTLGDTLVSA
301: AATVVSGGGG ADNVTNYMGQ MAIAMAKLTT LENFLRQADL LRHQTLQQMH RILTTRQAAR ALLVISDYFS RLRALSSLWL ARPRD

Best Arabidopsis Sequence Match ( AT1G68640.1 )
(BLAST)

001: MQSSFKTVPF TPDFYSQSSY FFRGDSCLEE FHQPVNGFHH EEAIDLSPNV TIASANLHYT TFDTVMDCGG GGGGGLRERL EGGEEECLDT GQLVYQKGTR
101: LVGGGVGEVN SSWCDSVSAM ADNSQHTDTS TDIDTDDKTQ LNGGHQGMLL ATNCSDQSNV KSSDQRTLRR LAQNREAARK SRLRKKAYVQ QLENSRIRLA
201: QLEEELKRAR QQGSLVERGV SADHTHLAAG NGVFSFELEY TRWKEEHQRM INDLRSGVNS QLGDNDLRVL VDAVMSHYDE IFRLKGIGTK VDVFHMLSGM
301: WKTPAERFFM WLGGFRSSEL LKILGNHVDP LTDQQLIGIC NLQQSSQQAE DALSQGMEAL QQSLLETLSS ASMGPNSSAN VADYMGHMAM AMGKLGTLEN
401: FLRQADLLRQ QTLQQLHRIL TTRQAARAFL VIHDYISRLR ALSSLWLARP RD

Arabidopsis Description

PANTranscription factor PERIANTHIA [Source:UniProtKB/Swiss-Prot;Acc:Q9SX27]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.