Factsheet for Os05t0443900-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G276100.2	Wheat	nucleus	82.64	76.05
HORVU1Hr1G073870.2	Barley	nucleus	82.02	75.91
TraesCS1B01G285800.1	Wheat	nucleus	82.44	75.86
TraesCS1A01G276600.2	Wheat	nucleus	82.44	75.86
OQU78097	Sorghum	nucleus	77.69	72.03
Zm00001d038296_P001	Maize	nucleus	76.65	71.48
Os01t0859500-01	Rice	nucleus	74.17	66.6
GSMUA_Achr11P...	Banana	cytosol	30.37	60.74
Solyc11g068370.1.1	Tomato	nucleus	45.04	58.6
PGSC0003DMT400067782	Potato	nucleus	38.84	57.14
Os01t0279900-01	Rice	nucleus	36.16	53.19
GSMUA_Achr10P...	Banana	nucleus	51.03	52.33
CDY22689	Canola	nucleus	46.07	52.1
GSMUA_Achr11P...	Banana	nucleus	52.89	52.03
Bra031622.1-P	Field mustard	nucleus	45.45	51.4
GSMUA_Achr5P26200_001	Banana	nucleus	42.98	51.23
Os07t0687700-01	Rice	nucleus	35.12	50.9
Os03t0318600-01	Rice	nucleus	34.92	50.75
PGSC0003DMT400018306	Potato	nucleus	51.03	50.61
Solyc06g074320.2.1	Tomato	nucleus	51.65	49.9
VIT_06s0080g00360.t01	Wine grape	nucleus	51.45	49.8
KRH22685	Soybean	nucleus	50.41	49.8
KRH26635	Soybean	nucleus	50.0	49.59
Bra018634.1-P	Field mustard	nucleus	48.35	49.26
GSMUA_Achr3P22700_001	Banana	nucleus	51.24	49.01
CDX95068	Canola	nucleus	48.35	48.95
Os12t0152900-01	Rice	nucleus	49.38	48.88
Os11t0152700-01	Rice	nucleus	48.55	48.55
CDX93571	Canola	nucleus	47.93	48.54
KRH25227	Soybean	nucleus	50.21	48.5
KRH30432	Soybean	nucleus	49.17	48.28
AT1G08320.4	Thale cress	nucleus	47.93	48.23
CDY06309	Canola	nucleus	47.93	47.93
Os05t0492000-00	Rice	nucleus	30.17	44.24
Os10t0566200-00	Rice	extracellular	10.54	43.22
Os06t0265400-01	Rice	nucleus	34.09	42.86
Os04t0637000-01	Rice	nucleus	32.44	39.55
Os01t0882200-00	Rice	cytosol, extracellular	10.54	35.92
Os06t0614100-01	Rice	nucleus	32.64	35.03
Os09t0489500-02	Rice	nucleus	37.81	34.99
Os02t0194900-00	Rice	nucleus	26.65	34.58
Os09t0280500-01	Rice	nucleus	33.26	34.48
GSMUA_Achr11P...	Banana	nucleus	21.69	33.98
Os08t0176900-01	Rice	nucleus	25.62	31.88
Os01t0808100-01	Rice	nucleus	22.93	30.49
Os01t0859600-01	Rice	cytosol	12.6	14.63

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	MapMan:15.5.4.7.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0006950
GO:GO:0006952	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565
InterPro:IPR004827	InterPro:IPR025422	EnsemblPlantsGene:Os05g0443900	EnsemblPlants:Os05t0443900-01	PFAM:PF00170	PFAM:PF14144
ScanProsite:PS00036	PFscan:PS50217	PFscan:PS51806	PANTHER:PTHR22952	PANTHER:PTHR22952:SF346	SMART:SM00338
SUPFAM:SSF57959	InterPro:TGA_domain	UniParc:UPI0000E124FD	InterPro:bZIP	SEG:seg	:

Description

b-ZIP TRANSCRIPTION FACTOR 41Similar to Basic leucine zipper protein (Liguleless2). (Os05t0443900-01)

Coordinates

chr5:+:21718749..21724490

Molecular Weight (calculated)

53599.2 Da

IEP (calculated)

5.917

GRAVY (calculated)

-0.503

Length

484 amino acids

Sequence
(BLAST)

001: PKDSANLRRP HESGAFQELQ PAAAAYFGEL EKALIHGTSA GAGVDHGMIQ SDAYTESAGY LAARPPTLEI FPSWPMSHLQ EPYSNSQSVG STTDSSSAQN
101: TMSQAELVSP ASMRSDSGQE QQQQEVLMVT IDDYNYKQGL GAAIATAPSF QQHAGGLDMR KHGSTRKDGK LLDAKTERRL AQNREAARKS RLRKKAYVQQ
201: LETSRIRLQQ IEQELQRARS QGLFPGGCSA PGDMSSGAVM FDMDYTRWID DDSKCMAELQ GALQAQLPDG NLGAIVEECM RHYDELFHLR AVLASSDVFH
301: LMTGMWAAPA ERCFLWMAGF RPSEILKMLI PQLDPLTEQQ LMGMCSLQQS SEQTEEALAQ GLHQLHQSLA DAVGGGPLND GADVANYTGL MALALGRLEN
401: LESFYRQADN LRQETLHHMR RILTTRQTAR CFLSIGEYNR RLRALSSLWA SRPRENFIAT ENVSPTGTEF QVIQQSQQNQ FSGF

Best Arabidopsis Sequence Match ( AT1G08320.3 )
(BLAST)

001: MANHRMSEAT NHNHNHHLPY SLIHGLNNNH PSSGFINQDG SSSFDFGELE EAIVLQGVKY RNEEAKPPLL GGGGGATTLE MFPSWPIRTH QTLPTESSKS
101: GGESSDSGSA NFSGKAESQQ PESPMSSKHH LMLQPHHNNM ANSSSTSGLP STSRTLAPPK PSEDKRKATT SGKQLDAKTL RRLAQNREAA RKSRLRKKAY
201: VQQLESSRIK LSQLEQELQR ARSQGLFMGG CGPPGPNITS GAAIFDMEYG RWLEDDNRHM SEIRTGLQAH LSDNDLRLIV DGYIAHFDEI FRLKAVAAKA
301: DVFHLIIGTW MSPAERCFIW MAGFRPSDLI KILVSQMDLL TEQQLMGIYS LQHSSQQAEE ALSQGLEQLQ QSLIDTLAAS PVIDGMQQMA VALGKISNLE
401: GFIRQADNLR QQTVHQLRRI LTVRQAARCF LVIGEYYGRL RALSSLWLSR PRETLMSDET SCQTTTDLQI VQSSRNHFSN F

Arabidopsis Description

TGA9Transcription factor TGA9 [Source:UniProtKB/Swiss-Prot;Acc:Q93XM6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.