Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400067782 | Potato | nucleus | 58.26 | 42.86 |
| GSMUA_Achr5P26200_001 | Banana | nucleus | 65.29 | 38.92 |
| Solyc11g068370.1.1 | Tomato | nucleus | 57.85 | 37.63 |
| GSMUA_Achr10P... | Banana | nucleus | 73.14 | 37.5 |
| GSMUA_Achr8P05800_001 | Banana | nucleus | 51.24 | 37.35 |
| GSMUA_Achr3P25020_001 | Banana | nucleus | 50.41 | 36.75 |
| GSMUA_AchrUn_... | Banana | nucleus | 48.35 | 33.05 |
| GSMUA_Achr10P... | Banana | nucleus | 47.93 | 33.05 |
| GSMUA_Achr11P... | Banana | nucleus | 66.94 | 32.93 |
| CDY22689 | Canola | nucleus | 57.85 | 32.71 |
| GSMUA_Achr2P06770_001 | Banana | nucleus | 64.05 | 32.43 |
| Bra031622.1-P | Field mustard | nucleus | 57.02 | 32.24 |
| GSMUA_Achr5P16630_001 | Banana | nucleus | 48.35 | 32.05 |
| GSMUA_Achr3P22700_001 | Banana | nucleus | 66.94 | 32.02 |
| GSMUA_Achr9P27700_001 | Banana | nucleus | 47.93 | 30.93 |
| Os05t0443900-01 | Rice | nucleus | 60.74 | 30.37 |
| PGSC0003DMT400018306 | Potato | nucleus | 60.74 | 30.12 |
| AT1G08320.4 | Thale cress | nucleus | 58.26 | 29.31 |
| GSMUA_Achr3P11150_001 | Banana | nucleus | 50.0 | 29.23 |
| Solyc06g074320.2.1 | Tomato | nucleus | 60.33 | 29.14 |
| VIT_06s0080g00360.t01 | Wine grape | nucleus | 59.92 | 29.0 |
| KRH22685 | Soybean | nucleus | 58.68 | 28.98 |
| KRH26635 | Soybean | nucleus | 58.26 | 28.89 |
| CDX95068 | Canola | nucleus | 57.02 | 28.87 |
| CDX93571 | Canola | nucleus | 57.02 | 28.87 |
| Bra018634.1-P | Field mustard | nucleus | 56.61 | 28.84 |
| GSMUA_Achr9P15550_001 | Banana | nucleus | 50.83 | 28.67 |
| Os01t0859500-01 | Rice | nucleus | 63.64 | 28.57 |
| CDY06309 | Canola | nucleus | 57.02 | 28.51 |
| GSMUA_Achr10P... | Banana | nucleus | 52.89 | 28.01 |
| KXG33735 | Sorghum | nucleus | 61.16 | 27.77 |
| TraesCS3A01G372400.2 | Wheat | nucleus | 64.88 | 27.4 |
| KRH30432 | Soybean | nucleus | 55.79 | 27.38 |
| KRH25227 | Soybean | nucleus | 56.61 | 27.35 |
| TraesCS3B01G404800.2 | Wheat | nucleus | 64.46 | 27.23 |
| TraesCS3D01G365200.3 | Wheat | nucleus | 64.88 | 27.07 |
| GSMUA_Achr11P... | Banana | nucleus | 52.48 | 26.57 |
| HORVU1Hr1G073870.2 | Barley | nucleus | 57.02 | 26.39 |
| OQU78097 | Sorghum | nucleus | 56.61 | 26.25 |
| Zm00001d038296_P001 | Maize | nucleus | 55.79 | 26.01 |
| Zm00001d012294_P009 | Maize | nucleus | 59.5 | 25.95 |
| TraesCS1A01G276600.2 | Wheat | nucleus | 55.79 | 25.67 |
| TraesCS1B01G285800.1 | Wheat | nucleus | 55.79 | 25.67 |
| TraesCS1D01G276100.2 | Wheat | nucleus | 55.79 | 25.67 |
| GSMUA_AchrUn_... | Banana | nucleus | 50.83 | 25.0 |
| Zm00001d042777_P006 | Maize | nucleus | 61.16 | 22.77 |
| GSMUA_Achr9P20200_001 | Banana | plastid | 51.24 | 22.67 |
| GSMUA_Achr8P21670_001 | Banana | nucleus | 52.07 | 21.65 |
| HORVU3Hr1G084340.10 | Barley | nucleus | 31.82 | 13.53 |
| GSMUA_Achr11P... | Banana | nucleus | 3.72 | 2.91 |
Protein Annotations
| MapMan:15.5.4.7.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSMUA_Achr11G26160_001 | EnsemblPlants:GSMUA_Achr11P26160_001 | EnsemblPlants:GSMUA_Achr11T26160_001 | InterPro:IPR025422 | UniProt:M0RVJ6 | PFAM:PF14144 |
| PFscan:PS51806 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF215 | InterPro:TGA_domain | UniParc:UPI0002969E01 | SEG:seg |
Description
TGACG-sequence-specific DNA-binding protein TGA-2.1 [Source:GMGC_GENE;Acc:GSMUA_Achr11G26160_001]
Coordinates
chr11:-:25031753..25034110
Molecular Weight (calculated)
27122.4 Da
IEP (calculated)
6.505
GRAVY (calculated)
-0.200
Length
242 amino acids
Sequence
(BLAST)
(BLAST)
001: MEYGRWLDDN CKIMSDLRAA LEAHLPDDNL GVVVDHCIRH YDDLFRLKAI VAQSDVFHLL NGIWKTPAER CFLWMGGFRP SELIKILIRQ LDPLTDQQWM
101: GMRGFQHSSQ QAEEALSRGL EQVHQSLGQT VAGGSLSDGI DVGNYVGHAA IAMGKLADLE GFIGQADNLR QQTLHQLRQQ LTTKQAARCF LAIGEYFTRL
201: RALSSLWASR PQESLVANDS VVPATADPHI IHQPLHNHFS AF
101: GMRGFQHSSQ QAEEALSRGL EQVHQSLGQT VAGGSLSDGI DVGNYVGHAA IAMGKLADLE GFIGQADNLR QQTLHQLRQQ LTTKQAARCF LAIGEYFTRL
201: RALSSLWASR PQESLVANDS VVPATADPHI IHQPLHNHFS AF
001: MANHRMSEAT NHNHNHHLPY SLIHGLNNNH PSSGFINQDG SSSFDFGELE EAIVLQGVKY RNEEAKPPLL GGGGGATTLE MFPSWPIRTH QTLPTESSKS
101: GGESSDSGSA NFSGKAESQQ PESPMSSKHH LMLQPHHNNM ANSSSTSGLP STSRTLAPPK PSEDKRKATT SGKQLDAKTL RRLAQNREAA RKSRLRKKAY
201: VQQLESSRIK LSQLEQELQR ARSQGLFMGG CGPPGPNITS GAAIFDMEYG RWLEDDNRHM SEIRTGLQAH LSDNDLRLIV DGYIAHFDEI FRLKAVAAKA
301: DVFHLIIGTW MSPAERCFIW MAGFRPSDLI KILVSQMDLL TEQQLMGIYS LQHSSQQAEE ALSQGLEQLQ QSLIDTLAAS PVIDGMQQMA VALGKISNLE
401: GFIRQADNLR QQTVHQLRRI LTVRQAARCF LVIGEYYGRL RALSSLWLSR PRETLMSDET SCQTTTDLQI VQSSRNHFSN F
101: GGESSDSGSA NFSGKAESQQ PESPMSSKHH LMLQPHHNNM ANSSSTSGLP STSRTLAPPK PSEDKRKATT SGKQLDAKTL RRLAQNREAA RKSRLRKKAY
201: VQQLESSRIK LSQLEQELQR ARSQGLFMGG CGPPGPNITS GAAIFDMEYG RWLEDDNRHM SEIRTGLQAH LSDNDLRLIV DGYIAHFDEI FRLKAVAAKA
301: DVFHLIIGTW MSPAERCFIW MAGFRPSDLI KILVSQMDLL TEQQLMGIYS LQHSSQQAEE ALSQGLEQLQ QSLIDTLAAS PVIDGMQQMA VALGKISNLE
401: GFIRQADNLR QQTVHQLRRI LTVRQAARCF LVIGEYYGRL RALSSLWLSR PRETLMSDET SCQTTTDLQI VQSSRNHFSN F
Arabidopsis Description
TGA9Transcription factor TGA9 [Source:UniProtKB/Swiss-Prot;Acc:Q93XM6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.