Factsheet for GSMUA_Achr11P14570_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	nucleus	66.46	69.28
GSMUA_Achr11P...	Banana	cytosol	32.93	66.94
GSMUA_Achr2P06770_001	Banana	nucleus	61.18	62.97
GSMUA_Achr3P22700_001	Banana	nucleus	64.23	62.45
GSMUA_Achr5P26200_001	Banana	nucleus	50.81	61.58
Solyc11g068370.1.1	Tomato	nucleus	44.31	58.6
VIT_06s0080g00360.t01	Wine grape	nucleus	58.54	57.6
KRH26635	Soybean	nucleus	56.71	57.17
PGSC0003DMT400067782	Potato	nucleus	38.21	57.14
KRH22685	Soybean	nucleus	56.71	56.94
GSMUA_Achr8P05800_001	Banana	nucleus	38.41	56.93
GSMUA_Achr3P25020_001	Banana	nucleus	38.21	56.63
PGSC0003DMT400018306	Potato	nucleus	55.28	55.74
Solyc06g074320.2.1	Tomato	nucleus	56.5	55.49
KRH30432	Soybean	nucleus	55.08	54.97
KRH25227	Soybean	nucleus	55.49	54.49
CDY22689	Canola	nucleus	46.34	53.27
AT1G08320.4	Thale cress	nucleus	52.03	53.22
Bra031622.1-P	Field mustard	nucleus	46.14	53.04
Os05t0443900-01	Rice	nucleus	52.03	52.89
CDX93571	Canola	nucleus	51.22	52.72
Bra018634.1-P	Field mustard	nucleus	50.81	52.63
CDX95068	Canola	nucleus	51.02	52.51
Os01t0859500-01	Rice	nucleus	56.3	51.39
CDY06309	Canola	nucleus	50.41	51.24
KXG33735	Sorghum	nucleus	55.08	50.84
HORVU1Hr1G073870.2	Barley	nucleus	52.85	49.71
TraesCS1B01G285800.1	Wheat	nucleus	53.05	49.62
TraesCS1D01G276100.2	Wheat	nucleus	52.64	49.24
TraesCS1A01G276600.2	Wheat	nucleus	52.24	48.86
GSMUA_Achr5P16630_001	Banana	nucleus	35.57	47.95
GSMUA_AchrUn_...	Banana	nucleus	34.35	47.74
Zm00001d038296_P001	Maize	nucleus	50.2	47.59
OQU78097	Sorghum	nucleus	50.41	47.51
Zm00001d012294_P009	Maize	nucleus	53.46	47.39
TraesCS3B01G404800.2	Wheat	nucleus	55.08	47.29
TraesCS3D01G365200.3	Wheat	nucleus	55.28	46.9
TraesCS3A01G372400.2	Wheat	nucleus	54.47	46.77
GSMUA_Achr10P...	Banana	nucleus	33.13	46.44
GSMUA_Achr9P27700_001	Banana	nucleus	35.37	46.4
GSMUA_Achr3P11150_001	Banana	nucleus	37.6	44.69
GSMUA_Achr10P...	Banana	nucleus	40.24	43.33
Zm00001d042777_P006	Maize	nucleus	56.1	42.46
GSMUA_Achr11P...	Banana	nucleus	40.85	42.05
GSMUA_Achr9P15550_001	Banana	nucleus	35.98	41.26
GSMUA_Achr11P...	Banana	nucleus	25.41	40.45
GSMUA_AchrUn_...	Banana	nucleus	38.41	38.41
GSMUA_Achr9P20200_001	Banana	plastid	38.62	34.73
GSMUA_Achr8P21670_001	Banana	nucleus	40.85	34.54
HORVU3Hr1G084340.10	Barley	nucleus	38.82	33.57

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	MapMan:15.5.4.7.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	EnsemblPlantsGene:GSMUA_Achr11G14570_001
EnsemblPlants:GSMUA_Achr11P14570_001	EnsemblPlants:GSMUA_Achr11T14570_001	InterPro:IPR004827	InterPro:IPR025422	UniProt:M0RS87	PFAM:PF00170
PFAM:PF14144	ScanProsite:PS00036	PFscan:PS50217	PFscan:PS51806	PANTHER:PTHR22952	PANTHER:PTHR22952:SF215
SMART:SM00338	SUPFAM:SSF57959	InterPro:TGA_domain	UniParc:UPI0002948CAD	InterPro:bZIP	SEG:seg

Description

transcription factor, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G14570_001]

Coordinates

chr11:+:15761643..15767931

Molecular Weight (calculated)

54408.6 Da

IEP (calculated)

7.048

GRAVY (calculated)

-0.408

Length

492 amino acids

Sequence
(BLAST)

001: MATHRIGETG LSDSGPSTRS VSYGVHGTSL AASNFFDQEG AAYFGELEEA LMQGVDGIRE IEDRKSFFGP RPATLEIFPS WPMRFQQTPR GKAHSARSTD
101: SGSAQNTPSH PGSDSTSSRK ETLMMMMTSG ASMTGTTPTL QPTSQDKISG NGNPSTLSIS LLFLLFLKMT DSTIEKHGKQ LDAKTLRRLA QNREAARKSR
201: LKKKAYVQQL ESSRLRLKQL EQELQRARSQ GLFLGVAGSS NEAISPGAAM FDMEHARWLD ENCKLMSELR GALQAHLPEA SFTVIVDQCI MNYDELFQLK
301: AEVAKSDVFH LLSGSWTTPA ERSFLWMGGF RPSELLQILI PQLDPSTEQQ LIYNLKQSSQ QAEEALSQGL EQLHQSLADT VAGGPLSDGV YVGNYMGHMV
401: LALEKLAHLE GFVRQADNLR QETLHQLRRI LTSRQAARCF VAIGEYYTRL RALSSLWASR PRQNLIGDDS VGSSTTDLQI VHPSMQDHFS GF

Best Arabidopsis Sequence Match ( AT1G08320.3 )
(BLAST)

001: MANHRMSEAT NHNHNHHLPY SLIHGLNNNH PSSGFINQDG SSSFDFGELE EAIVLQGVKY RNEEAKPPLL GGGGGATTLE MFPSWPIRTH QTLPTESSKS
101: GGESSDSGSA NFSGKAESQQ PESPMSSKHH LMLQPHHNNM ANSSSTSGLP STSRTLAPPK PSEDKRKATT SGKQLDAKTL RRLAQNREAA RKSRLRKKAY
201: VQQLESSRIK LSQLEQELQR ARSQGLFMGG CGPPGPNITS GAAIFDMEYG RWLEDDNRHM SEIRTGLQAH LSDNDLRLIV DGYIAHFDEI FRLKAVAAKA
301: DVFHLIIGTW MSPAERCFIW MAGFRPSDLI KILVSQMDLL TEQQLMGIYS LQHSSQQAEE ALSQGLEQLQ QSLIDTLAAS PVIDGMQQMA VALGKISNLE
401: GFIRQADNLR QQTVHQLRRI LTVRQAARCF LVIGEYYGRL RALSSLWLSR PRETLMSDET SCQTTTDLQI VQSSRNHFSN F

Arabidopsis Description

TGA9Transcription factor TGA9 [Source:UniProtKB/Swiss-Prot;Acc:Q93XM6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.