Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX95068 | Canola | nucleus | 91.89 | 92.47 |
| CDX93571 | Canola | nucleus | 91.68 | 92.26 |
| Bra018634.1-P | Field mustard | nucleus | 90.85 | 92.0 |
| CDY06309 | Canola | nucleus | 91.48 | 90.91 |
| Bra031622.1-P | Field mustard | nucleus | 80.25 | 90.19 |
| CDY22689 | Canola | nucleus | 79.83 | 89.72 |
| VIT_06s0080g00360.t01 | Wine grape | nucleus | 71.31 | 68.6 |
| PGSC0003DMT400067782 | Potato | nucleus | 46.15 | 67.48 |
| Solyc11g068370.1.1 | Tomato | nucleus | 52.18 | 67.47 |
| PGSC0003DMT400018306 | Potato | nucleus | 65.7 | 64.75 |
| Solyc06g074320.2.1 | Tomato | nucleus | 67.15 | 64.47 |
| KRH26635 | Soybean | nucleus | 64.86 | 63.93 |
| KRH22685 | Soybean | nucleus | 64.45 | 63.27 |
| KRH25227 | Soybean | nucleus | 65.07 | 62.48 |
| KRH30432 | Soybean | nucleus | 64.03 | 62.47 |
| Zm00001d023424_P001 | Maize | nucleus | 39.71 | 61.61 |
| GSMUA_Achr11P... | Banana | cytosol | 29.31 | 58.26 |
| HORVU4Hr1G025130.10 | Barley | nucleus | 43.87 | 58.13 |
| AT5G06950.5 | Thale cress | nucleus | 38.67 | 56.36 |
| AT5G06960.1 | Thale cress | nucleus | 37.42 | 54.55 |
| GSMUA_Achr2P06770_001 | Banana | nucleus | 52.6 | 52.93 |
| AT3G12250.4 | Thale cress | nucleus | 38.67 | 52.39 |
| GSMUA_Achr11P... | Banana | nucleus | 53.22 | 52.03 |
| GSMUA_Achr5P26200_001 | Banana | nucleus | 43.24 | 51.23 |
| GSMUA_Achr10P... | Banana | nucleus | 49.9 | 50.85 |
| OQU82891 | Sorghum | nucleus | 51.56 | 50.82 |
| KXG22976 | Sorghum | nucleus | 50.94 | 50.72 |
| Os12t0152900-01 | Rice | nucleus | 51.56 | 50.72 |
| Zm00001d052543_P001 | Maize | nucleus | 51.14 | 50.62 |
| Os11t0152700-01 | Rice | nucleus | 49.69 | 49.38 |
| Os05t0443900-01 | Rice | nucleus | 48.23 | 47.93 |
| Os01t0859500-01 | Rice | nucleus | 52.6 | 46.94 |
| KXG33735 | Sorghum | nucleus | 51.77 | 46.72 |
| GSMUA_Achr3P22700_001 | Banana | nucleus | 48.65 | 46.25 |
| AT1G22070.1 | Thale cress | nucleus | 36.17 | 45.31 |
| TraesCS4D01G129900.1 | Wheat | nucleus | 50.1 | 44.8 |
| TraesCS4A01G183400.2 | Wheat | nucleus | 50.1 | 44.55 |
| AT5G65210.2 | Thale cress | nucleus | 33.89 | 44.29 |
| AT1G77920.1 | Thale cress | nucleus | 33.89 | 44.29 |
| Zm00001d012294_P009 | Maize | nucleus | 50.94 | 44.14 |
| TraesCS1B01G285800.1 | Wheat | nucleus | 47.82 | 43.73 |
| HORVU1Hr1G073870.2 | Barley | nucleus | 47.4 | 43.59 |
| TraesCS3B01G404800.2 | Wheat | nucleus | 51.77 | 43.46 |
| TraesCS1A01G276600.2 | Wheat | nucleus | 47.4 | 43.35 |
| TraesCS1D01G276100.2 | Wheat | nucleus | 47.4 | 43.35 |
| TraesCS3A01G372400.2 | Wheat | nucleus | 51.56 | 43.28 |
| OQU78097 | Sorghum | nucleus | 46.78 | 43.1 |
| TraesCS3D01G365200.3 | Wheat | nucleus | 51.98 | 43.1 |
| AT5G06839.3 | Thale cress | nucleus | 41.16 | 43.04 |
| TraesCS4B01G135000.1 | Wheat | nucleus | 50.52 | 42.93 |
| AT5G10030.3 | Thale cress | nucleus | 32.43 | 42.86 |
| Zm00001d038296_P001 | Maize | nucleus | 46.15 | 42.77 |
| AT1G68640.1 | Thale cress | nucleus | 38.05 | 40.49 |
| Zm00001d042777_P006 | Maize | nucleus | 52.6 | 38.92 |
| GSMUA_Achr11P... | Banana | nucleus | 23.49 | 36.57 |
| HORVU3Hr1G084340.10 | Barley | nucleus | 36.59 | 30.93 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | MapMan:15.5.4.7.1 | EntrezGene:837353 | ProteinID:AAF18246.1 | ProteinID:AAF22906.1 |
| ProteinID:AEE28275.1 | ProteinID:AEE28276.1 | ProteinID:AEE28277.1 | EMBL:AJ314757 | EMBL:AK222204 | EMBL:AK227667 |
| ProteinID:ANM59112.1 | ProteinID:ANM59113.1 | ArrayExpress:AT1G08320 | EnsemblPlantsGene:AT1G08320 | RefSeq:AT1G08320 | TAIR:AT1G08320 |
| RefSeq:AT1G08320-TAIR-G | EnsemblPlants:AT1G08320.4 | Unigene:At.10454 | ncoils:Coil | GO:GO:0000003 | GO:GO:0002237 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009987 |
| GO:GO:0042803 | GO:GO:0043565 | GO:GO:0048653 | GO:GO:0071588 | EMBL:HQ132743 | InterPro:IPR004827 |
| InterPro:IPR025422 | RefSeq:NP_001030998.1 | RefSeq:NP_001030999.1 | RefSeq:NP_001318954.1 | RefSeq:NP_001321503.1 | RefSeq:NP_563810.2 |
| PFAM:PF00170 | PFAM:PF14144 | ScanProsite:PS00036 | PFscan:PS50217 | PFscan:PS51806 | PANTHER:PTHR22952 |
| PANTHER:PTHR22952:SF179 | UniProt:Q93XM6 | SMART:SM00338 | SUPFAM:SSF57959 | Symbol:TGA9 | InterPro:TGA_domain |
| UniParc:UPI00000ACE09 | InterPro:bZIP | SEG:seg | : | : | : |
Description
TGA9Transcription factor TGA9 [Source:UniProtKB/Swiss-Prot;Acc:Q93XM6]
Coordinates
chr1:-:2621860..2628594
Molecular Weight (calculated)
53517.4 Da
IEP (calculated)
8.093
GRAVY (calculated)
-0.529
Length
481 amino acids
Sequence
(BLAST)
(BLAST)
001: MANHRMSEAT NHNHNHHLPY SLIHGLNNNH PSSGFINQDG SSSFDFGELE EAIVLQGVKY RNEEAKPPLL GGGGGATTLE MFPSWPIRTH QTLPTESSKS
101: GGESSDSGSA NFSGKAESQQ PESPMSSKHH LMLQPHHNNM ANSSSTSGLP STSRTLAPPK PSEDKRKATT SGKQLDAKTL RRLAQNREAA RKSRLRKKAY
201: VQQLESSRIK LSQLEQELQR ARSQGLFMGG CGPPGPNITS GAAIFDMEYG RWLEDDNRHM SEIRTGLQAH LSDNDLRLIV DGYIAHFDEI FRLKAVAAKA
301: DVFHLIIGTW MSPAERCFIW MAGFRPSDLI KILVSQMDLL TEQQLMGIYS LQHSSQQAEE ALSQGLEQLQ QSLIDTLAAS PVIDGMQQMA VALGKISNLE
401: GFIRQADNLR QQTVHQLRRI LTVRQAARCF LVIGEYYGRL RALSSLWLSR PRETLMSDET SCQTTTDLQI VQSSRNHFSN F
101: GGESSDSGSA NFSGKAESQQ PESPMSSKHH LMLQPHHNNM ANSSSTSGLP STSRTLAPPK PSEDKRKATT SGKQLDAKTL RRLAQNREAA RKSRLRKKAY
201: VQQLESSRIK LSQLEQELQR ARSQGLFMGG CGPPGPNITS GAAIFDMEYG RWLEDDNRHM SEIRTGLQAH LSDNDLRLIV DGYIAHFDEI FRLKAVAAKA
301: DVFHLIIGTW MSPAERCFIW MAGFRPSDLI KILVSQMDLL TEQQLMGIYS LQHSSQQAEE ALSQGLEQLQ QSLIDTLAAS PVIDGMQQMA VALGKISNLE
401: GFIRQADNLR QQTVHQLRRI LTVRQAARCF LVIGEYYGRL RALSSLWLSR PRETLMSDET SCQTTTDLQI VQSSRNHFSN F
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.