Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009241.1-P | Field mustard | nucleus | 88.18 | 93.87 |
| CDX98971 | Canola | nucleus | 93.03 | 93.6 |
| CDX70053 | Canola | nucleus | 92.42 | 93.27 |
| AT3G12250.4 | Thale cress | nucleus | 92.73 | 86.2 |
| AT5G06960.1 | Thale cress | nucleus | 83.64 | 83.64 |
| PGSC0003DMT400024428 | Potato | nucleus | 78.48 | 79.94 |
| Solyc11g064950.1.1 | Tomato | nucleus | 78.48 | 79.94 |
| GSMUA_Achr8P05800_001 | Banana | nucleus | 80.3 | 79.82 |
| GSMUA_Achr3P25020_001 | Banana | nucleus | 80.3 | 79.82 |
| KRH36324 | Soybean | nucleus | 80.0 | 79.52 |
| Os01t0279900-01 | Rice | nucleus | 79.09 | 79.33 |
| EES02530 | Sorghum | nucleus | 76.67 | 76.67 |
| TraesCS3A01G190700.2 | Wheat | nucleus | 76.36 | 75.9 |
| TraesCS3B01G220400.2 | Wheat | nucleus | 76.36 | 75.9 |
| Solyc01g008730.2.1 | Tomato | nucleus | 75.15 | 75.84 |
| HORVU3Hr1G042790.4 | Barley | nucleus | 76.06 | 75.83 |
| TraesCS3D01G194800.2 | Wheat | nucleus | 75.76 | 75.3 |
| KXG39494 | Sorghum | nucleus | 76.36 | 75.22 |
| Os07t0687700-01 | Rice | nucleus | 75.76 | 74.85 |
| Os03t0318600-01 | Rice | nucleus | 75.45 | 74.77 |
| KXG36997 | Sorghum | nucleus | 74.85 | 74.17 |
| HORVU3Hr1G042830.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 33.33 | 73.83 |
| Zm00001d022542_P002 | Maize | nucleus | 74.24 | 73.57 |
| TraesCS4B01G178600.1 | Wheat | nucleus | 74.24 | 73.35 |
| HORVU4Hr1G052330.3 | Barley | nucleus | 74.24 | 73.35 |
| TraesCS2B01G113200.2 | Wheat | nucleus | 74.55 | 73.21 |
| TraesCS2D01G096800.2 | Wheat | nucleus | 74.55 | 73.21 |
| TraesCS4D01G180200.4 | Wheat | nucleus | 74.24 | 73.13 |
| TraesCS4A01G126300.2 | Wheat | nucleus | 74.24 | 73.13 |
| TraesCS2A01G097500.2 | Wheat | nucleus | 74.24 | 72.92 |
| PGSC0003DMT400026710 | Potato | mitochondrion | 38.79 | 72.73 |
| HORVU2Hr1G016580.5 | Barley | nucleus | 71.52 | 70.03 |
| KXG22247 | Sorghum | nucleus | 65.45 | 65.06 |
| Os05t0492000-00 | Rice | nucleus | 64.55 | 64.55 |
| Zm00001d010658_P001 | Maize | nucleus | 63.33 | 60.58 |
| Zm00001d008225_P001 | Maize | nucleus | 76.67 | 60.24 |
| KRG93068 | Soybean | nucleus | 80.0 | 59.46 |
| Zm00001d028936_P001 | Maize | nucleus | 70.0 | 59.08 |
| VIT_13s0084g00660.t01 | Wine grape | nucleus | 81.82 | 57.57 |
| TraesCS1A01G096300.1 | Wheat | nucleus | 58.18 | 57.31 |
| GSMUA_Achr10P... | Banana | nucleus | 78.79 | 56.89 |
| TraesCS1B01G127400.1 | Wheat | nucleus | 58.18 | 56.47 |
| KRH20680 | Soybean | nucleus | 80.0 | 56.29 |
| TraesCS1D01G105300.1 | Wheat | nucleus | 57.27 | 55.75 |
| GSMUA_Achr11P... | Banana | nucleus | 80.3 | 55.44 |
| EES03778 | Sorghum | nucleus | 78.18 | 55.13 |
| TraesCS3A01G334100.1 | Wheat | nucleus | 78.79 | 54.74 |
| HORVU3Hr1G079010.5 | Barley | nucleus | 79.09 | 54.72 |
| TraesCS3D01G327600.1 | Wheat | nucleus | 78.18 | 54.09 |
| TraesCS3B01G365100.1 | Wheat | nucleus | 77.88 | 53.88 |
| KRH13334 | Soybean | nucleus | 79.39 | 52.72 |
| HORVU1Hr1G068220.1 | Barley | nucleus | 53.03 | 51.02 |
| Zm00001d043153_P001 | Maize | nucleus | 63.03 | 49.29 |
| AT5G10030.3 | Thale cress | nucleus | 53.03 | 48.08 |
| AT1G68640.1 | Thale cress | nucleus | 65.45 | 47.79 |
| Zm00001d012553_P003 | Maize | nucleus | 67.27 | 47.23 |
| AT5G65210.2 | Thale cress | nucleus | 52.12 | 46.74 |
| AT1G77920.1 | Thale cress | nucleus | 51.82 | 46.47 |
| AT1G22070.1 | Thale cress | nucleus | 51.21 | 44.01 |
| Os01t0808100-01 | Rice | nucleus | 46.06 | 41.76 |
| HORVU0Hr1G032230.4 | Barley | nucleus | 43.03 | 40.46 |
| AT5G06839.3 | Thale cress | nucleus | 55.15 | 39.57 |
| AT1G08320.4 | Thale cress | nucleus | 56.36 | 38.67 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | MapMan:15.5.4.7.1 | MapMan:26.8.3.1.2 | EntrezGene:820405 | EntrezGene:830586 |
| UniProt:A0A178UBE9 | ProteinID:ABR46117.1 | ProteinID:ABR46118.1 | ProteinID:ABR46119.1 | ProteinID:ABR46120.1 | ProteinID:ABR46121.1 |
| ProteinID:ABR46122.1 | ProteinID:ABR46123.1 | ProteinID:ABR46124.1 | ProteinID:ABR46125.1 | ProteinID:ABR46127.1 | ProteinID:ABR46128.1 |
| ProteinID:ABR46129.1 | ProteinID:ABR46130.1 | ProteinID:ABR46133.1 | ProteinID:ABR46134.1 | ProteinID:ABR46135.1 | ProteinID:ABR46136.1 |
| ProteinID:AED91085.1 | ProteinID:AED91086.1 | ProteinID:AED91087.1 | ProteinID:AED91088.1 | Symbol:AHBP-1B | EMBL:AK117686 |
| ProteinID:ANM69734.1 | ArrayExpress:AT5G06950 | EnsemblPlantsGene:AT5G06950 | RefSeq:AT5G06950 | TAIR:AT5G06950 | RefSeq:AT5G06950-TAIR-G |
| EnsemblPlants:AT5G06950.5 | UniProt:B2BDR5 | ProteinID:BAB11153.1 | EMBL:BT006134 | ncoils:Coil | EMBL:D10042 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008219 | GO:GO:0009058 | GO:GO:0009605 | GO:GO:0009607 |
| GO:GO:0009626 | GO:GO:0009719 | GO:GO:0009862 | GO:GO:0009987 | GO:GO:0043565 | GO:GO:0045892 |
| GO:GO:0045893 | InterPro:IPR004827 | InterPro:IPR025422 | RefSeq:NP_001031845.1 | RefSeq:NP_001078539.1 | RefSeq:NP_001331392.1 |
| RefSeq:NP_196312.1 | RefSeq:NP_974744.1 | ProteinID:OAO90989.1 | UniProt:P43273 | PFAM:PF00170 | PFAM:PF14144 |
| ScanProsite:PS00036 | PFscan:PS50217 | PFscan:PS51806 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF244 | SMART:SM00338 |
| SUPFAM:SSF57959 | InterPro:TGA_domain | UniParc:UPI00000041F2 | InterPro:bZIP | SEG:seg | : |
Description
TGA2BZIP transcription factor TGA2 [Source:UniProtKB/TrEMBL;Acc:B2BDR5]
Coordinates
chr5:+:2151309..2154553
Molecular Weight (calculated)
36686.5 Da
IEP (calculated)
9.013
GRAVY (calculated)
-0.576
Length
330 amino acids
Sequence
(BLAST)
(BLAST)
001: MADTSPRTDV STDDDTDHPD LGSEGALVNT AASDSSDRSK GKMDQKTLRR LAQNREAARK SRLRKKAYVQ QLENSRLKLT QLEQELQRAR QQGVFISGTG
101: DQAHSTGGNG ALAFDAEHSR WLEEKNKQMN ELRSALNAHA GDSELRIIVD GVMAHYEELF RIKSNAAKND VFHLLSGMWK TPAERCFLWL GGFRSSELLK
201: LLANQLEPMT ERQLMGINNL QQTSQQAEDA LSQGMESLQQ SLADTLSSGT LGSSSSGNVA SYMGQMAMAM GKLGTLEGFI RQADNLRLQT LQQMIRVLTT
301: RQSARALLAI HDYFSRLRAL SSLWLARPRE
101: DQAHSTGGNG ALAFDAEHSR WLEEKNKQMN ELRSALNAHA GDSELRIIVD GVMAHYEELF RIKSNAAKND VFHLLSGMWK TPAERCFLWL GGFRSSELLK
201: LLANQLEPMT ERQLMGINNL QQTSQQAEDA LSQGMESLQQ SLADTLSSGT LGSSSSGNVA SYMGQMAMAM GKLGTLEGFI RQADNLRLQT LQQMIRVLTT
301: RQSARALLAI HDYFSRLRAL SSLWLARPRE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.