Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX70053 | Canola | nucleus | 98.78 | 99.08 |
| Bra009241.1-P | Field mustard | nucleus | 93.6 | 99.03 |
| AT5G06950.5 | Thale cress | nucleus | 93.6 | 93.03 |
| CDX73830 | Canola | nucleus | 90.24 | 89.43 |
| CDY08443 | Canola | nucleus | 89.94 | 89.12 |
| CDY00762 | Canola | nucleus | 89.94 | 89.12 |
| CDY50562 | Canola | nucleus | 90.55 | 88.92 |
| CDY52616 | Canola | nucleus | 89.63 | 88.29 |
| CDY14061 | Canola | nucleus | 79.88 | 80.37 |
| CDY05010 | Canola | nucleus | 79.57 | 80.06 |
| CDY42138 | Canola | nucleus | 77.44 | 78.4 |
| Solyc11g064950.1.1 | Tomato | nucleus | 76.22 | 77.16 |
| PGSC0003DMT400024428 | Potato | nucleus | 76.22 | 77.16 |
| Os01t0279900-01 | Rice | nucleus | 77.13 | 76.9 |
| GSMUA_Achr3P25020_001 | Banana | nucleus | 77.74 | 76.81 |
| GSMUA_Achr8P05800_001 | Banana | nucleus | 77.44 | 76.51 |
| KRH36324 | Soybean | nucleus | 77.13 | 76.2 |
| EES02530 | Sorghum | nucleus | 74.7 | 74.24 |
| Solyc01g008730.2.1 | Tomato | nucleus | 73.78 | 74.01 |
| TraesCS3B01G220400.2 | Wheat | nucleus | 74.39 | 73.49 |
| TraesCS3A01G190700.2 | Wheat | nucleus | 74.39 | 73.49 |
| HORVU3Hr1G042790.4 | Barley | nucleus | 74.09 | 73.41 |
| TraesCS3D01G194800.2 | Wheat | nucleus | 73.78 | 72.89 |
| HORVU3Hr1G042830.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 32.93 | 72.48 |
| Os07t0687700-01 | Rice | nucleus | 73.78 | 72.46 |
| KXG39494 | Sorghum | nucleus | 73.78 | 72.24 |
| Os03t0318600-01 | Rice | nucleus | 72.56 | 71.47 |
| KXG36997 | Sorghum | nucleus | 72.56 | 71.47 |
| TraesCS4B01G178600.1 | Wheat | nucleus | 72.56 | 71.26 |
| HORVU4Hr1G052330.3 | Barley | nucleus | 72.56 | 71.26 |
| TraesCS4A01G126300.2 | Wheat | nucleus | 72.56 | 71.04 |
| TraesCS4D01G180200.4 | Wheat | nucleus | 72.56 | 71.04 |
| Zm00001d022542_P002 | Maize | nucleus | 71.95 | 70.87 |
| TraesCS2D01G096800.2 | Wheat | nucleus | 72.26 | 70.54 |
| TraesCS2B01G113200.2 | Wheat | nucleus | 72.26 | 70.54 |
| PGSC0003DMT400026710 | Potato | mitochondrion | 37.8 | 70.45 |
| TraesCS2A01G097500.2 | Wheat | nucleus | 71.95 | 70.24 |
| HORVU2Hr1G016580.5 | Barley | nucleus | 69.82 | 67.95 |
| KXG22247 | Sorghum | nucleus | 64.02 | 63.25 |
| Os05t0492000-00 | Rice | nucleus | 61.59 | 61.21 |
| Zm00001d010658_P001 | Maize | nucleus | 61.89 | 58.84 |
| Zm00001d008225_P001 | Maize | nucleus | 74.7 | 58.33 |
| KRG93068 | Soybean | nucleus | 77.13 | 56.98 |
| Zm00001d028936_P001 | Maize | nucleus | 67.07 | 56.27 |
| TraesCS1A01G096300.1 | Wheat | nucleus | 56.71 | 55.52 |
| VIT_13s0084g00660.t01 | Wine grape | nucleus | 79.27 | 55.44 |
| KRH20680 | Soybean | nucleus | 78.05 | 54.58 |
| TraesCS1B01G127400.1 | Wheat | nucleus | 56.4 | 54.41 |
| GSMUA_Achr10P... | Banana | nucleus | 75.61 | 54.27 |
| TraesCS1D01G105300.1 | Wheat | nucleus | 55.79 | 53.98 |
| GSMUA_Achr11P... | Banana | nucleus | 77.74 | 53.35 |
| EES03778 | Sorghum | nucleus | 75.61 | 52.99 |
| TraesCS3A01G334100.1 | Wheat | nucleus | 76.22 | 52.63 |
| HORVU3Hr1G079010.5 | Barley | nucleus | 76.52 | 52.62 |
| TraesCS3D01G327600.1 | Wheat | nucleus | 75.61 | 51.99 |
| TraesCS3B01G365100.1 | Wheat | nucleus | 75.3 | 51.78 |
| KRH13334 | Soybean | nucleus | 77.13 | 50.91 |
| HORVU1Hr1G068220.1 | Barley | nucleus | 51.83 | 49.56 |
| CDY71150 | Canola | nucleus, plastid | 28.96 | 47.98 |
| Zm00001d043153_P001 | Maize | nucleus | 60.98 | 47.39 |
| CDY70396 | Canola | mitochondrion | 30.18 | 47.37 |
| CDX69866 | Canola | nucleus | 50.91 | 45.88 |
| CDX85782 | Canola | nucleus | 50.61 | 45.86 |
| CDY21625 | Canola | nucleus | 50.61 | 45.6 |
| CDY40074 | Canola | nucleus | 50.3 | 45.58 |
| CDX68037 | Canola | nucleus | 51.52 | 45.55 |
| CDY08810 | Canola | nucleus | 50.91 | 45.5 |
| CDX95999 | Canola | nucleus | 61.28 | 45.48 |
| CDY38608 | Canola | nucleus | 61.28 | 45.48 |
| Zm00001d012553_P003 | Maize | nucleus | 64.94 | 45.32 |
| CDY41495 | Canola | nucleus | 50.61 | 44.99 |
| CDY14552 | Canola | nucleus | 50.0 | 44.69 |
| CDY37811 | Canola | nucleus | 50.0 | 44.32 |
| CDY33975 | Canola | nucleus | 50.0 | 44.32 |
| CDY38843 | Canola | nucleus | 49.7 | 44.05 |
| CDY38253 | Canola | nucleus | 51.22 | 43.64 |
| CDY22689 | Canola | nucleus | 56.4 | 43.22 |
| CDY18683 | Canola | cytosol | 47.87 | 42.2 |
| CDX81273 | Canola | nucleus | 49.7 | 41.9 |
| CDY70714 | Canola | nucleus | 43.6 | 40.62 |
| CDY21336 | Canola | nucleus | 51.22 | 40.19 |
| Os01t0808100-01 | Rice | nucleus | 44.51 | 40.11 |
| CDX88399 | Canola | nucleus | 52.44 | 40.0 |
| CDY70235 | Canola | nucleus | 44.21 | 39.84 |
| CDX87494 | Canola | nucleus | 53.35 | 39.41 |
| HORVU0Hr1G032230.4 | Barley | nucleus | 42.07 | 39.32 |
| CDX95068 | Canola | nucleus | 56.71 | 38.91 |
| CDX70061 | Canola | nucleus | 53.35 | 38.8 |
| CDX93571 | Canola | nucleus | 56.4 | 38.7 |
| CDX98963 | Canola | nucleus | 53.05 | 38.58 |
| CDY06309 | Canola | nucleus | 56.71 | 38.43 |
| CDY00417 | Canola | mitochondrion | 19.51 | 27.59 |
| CDX79240 | Canola | nucleus | 44.82 | 25.79 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | MapMan:15.5.4.7.1 | MapMan:26.8.3.1.2 | GO:A0A078ECR2 | EnsemblPlants:CDX98971 |
| ProteinID:CDX98971 | ProteinID:CDX98971.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00107087001 | InterPro:IPR004827 |
| InterPro:IPR025422 | PFAM:PF00170 | PFAM:PF14144 | ScanProsite:PS00036 | PFscan:PS50217 | PFscan:PS51806 |
| PANTHER:PTHR22952 | PANTHER:PTHR22952:SF244 | SMART:SM00338 | SUPFAM:SSF57959 | InterPro:TGA_domain | UniParc:UPI0004EE9CC3 |
| InterPro:bZIP | SEG:seg | : | : | : | : |
Description
BnaC09g48640D
Coordinates
chrLK031907:+:854225..857017
Molecular Weight (calculated)
36489.4 Da
IEP (calculated)
9.314
GRAVY (calculated)
-0.499
Length
328 amino acids
Sequence
(BLAST)
(BLAST)
001: MADMSPITDV STDGDRDLGS EGALVNNTAA SDSSERSKNK LDQKTVRRLA QNREAARKSR LRKKAYVQQL ENSRLKLTQL EQELQRARQQ GVFISSTGDQ
101: AHSTGGNGAL AFDAEYSRWL EEKNKRMNEL RSALNAHAGD GELLIIVDGV MAHYEELFRI KSNAAKNDVF HLLYGMWKTP AERCFLWLGG FRSSEILKLL
201: VNQLEPMTER QVMGINSLQE TSQQAEDALS QGMESLQQSL ADTLSSGTLG SSSSGNVASY MGQMAMAMGK LGTLEGFIRQ ADNLRLQTLQ QMIRVLTTRQ
301: SARALLAIHD YSSRLRALSS LWLARPRE
101: AHSTGGNGAL AFDAEYSRWL EEKNKRMNEL RSALNAHAGD GELLIIVDGV MAHYEELFRI KSNAAKNDVF HLLYGMWKTP AERCFLWLGG FRSSEILKLL
201: VNQLEPMTER QVMGINSLQE TSQQAEDALS QGMESLQQSL ADTLSSGTLG SSSSGNVASY MGQMAMAMGK LGTLEGFIRQ ADNLRLQTLQ QMIRVLTTRQ
301: SARALLAIHD YSSRLRALSS LWLARPRE
001: MADTSPRTDV STDDDTDHPD LGSEGALVNT AASDSSDRSK GKMDQKTLRR LAQNREAARK SRLRKKAYVQ QLENSRLKLT QLEQELQRAR QQGVFISGTG
101: DQAHSTGGNG ALAFDAEHSR WLEEKNKQMN ELRSALNAHA GDSELRIIVD GVMAHYEELF RIKSNAAKND VFHLLSGMWK TPAERCFLWL GGFRSSELLK
201: LLANQLEPMT ERQLMGINNL QQTSQQAEDA LSQGMESLQQ SLADTLSSGT LGSSSSGNVA SYMGQMAMAM GKLGTLEGFI RQADNLRLQT LQQMIRVLTT
301: RQSARALLAI HDYFSRLRAL SSLWLARPRE
101: DQAHSTGGNG ALAFDAEHSR WLEEKNKQMN ELRSALNAHA GDSELRIIVD GVMAHYEELF RIKSNAAKND VFHLLSGMWK TPAERCFLWL GGFRSSELLK
201: LLANQLEPMT ERQLMGINNL QQTSQQAEDA LSQGMESLQQ SLADTLSSGT LGSSSSGNVA SYMGQMAMAM GKLGTLEGFI RQADNLRLQT LQQMIRVLTT
301: RQSARALLAI HDYFSRLRAL SSLWLARPRE
Arabidopsis Description
TGA2BZIP transcription factor TGA2 [Source:UniProtKB/TrEMBL;Acc:B2BDR5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.