Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX98963 | Canola | nucleus | 99.33 | 99.33 |
| Bra009233.1-P | Field mustard | cytosol | 60.98 | 98.21 |
| CDY71150 | Canola | nucleus, plastid | 41.24 | 93.94 |
| CDY70235 | Canola | nucleus | 75.39 | 93.41 |
| AT5G06839.3 | Thale cress | nucleus | 93.57 | 91.74 |
| CDY70714 | Canola | nucleus | 66.74 | 85.51 |
| CDY70396 | Canola | mitochondrion | 35.48 | 76.56 |
| PGSC0003DMT400029743 | Potato | nucleus, plastid | 55.65 | 66.05 |
| GSMUA_Achr9P27700_001 | Banana | nucleus | 51.22 | 61.6 |
| KRH67029 | Soybean | nucleus | 66.96 | 61.51 |
| KRG95350 | Soybean | nucleus | 66.74 | 61.3 |
| VIT_08s0007g06160.t01 | Wine grape | nucleus | 65.63 | 60.29 |
| KRH71904 | Soybean | nucleus | 62.97 | 58.68 |
| GSMUA_Achr3P11150_001 | Banana | nucleus | 53.66 | 58.45 |
| Solyc10g080410.1.1 | Tomato | nucleus | 58.98 | 57.95 |
| PGSC0003DMT400060865 | Potato | nucleus | 58.09 | 56.83 |
| Solyc10g078670.1.1 | Tomato | nucleus | 60.75 | 56.26 |
| KRH32997 | Soybean | nucleus | 62.53 | 54.55 |
| CDY14061 | Canola | nucleus | 39.25 | 54.29 |
| CDY05010 | Canola | nucleus | 39.25 | 54.29 |
| CDY08443 | Canola | nucleus | 39.25 | 53.47 |
| CDX98971 | Canola | nucleus | 38.8 | 53.35 |
| CDX70053 | Canola | nucleus | 38.58 | 53.21 |
| CDY00762 | Canola | nucleus | 38.14 | 51.96 |
| CDX73830 | Canola | nucleus | 38.14 | 51.96 |
| CDY50562 | Canola | nucleus | 38.36 | 51.8 |
| CDY52616 | Canola | nucleus | 38.14 | 51.65 |
| Zm00001d020938_P002 | Maize | nucleus | 52.99 | 49.18 |
| KXG35912 | Sorghum | nucleus | 52.55 | 47.4 |
| CDY42138 | Canola | nucleus | 32.82 | 45.68 |
| CDX68037 | Canola | nucleus | 37.03 | 45.01 |
| CDY38843 | Canola | nucleus | 36.81 | 44.86 |
| GSMUA_Achr9P20200_001 | Banana | plastid | 54.32 | 44.79 |
| CDY41495 | Canola | nucleus | 36.59 | 44.72 |
| Zm00001d006027_P002 | Maize | nucleus | 49.67 | 44.53 |
| CDY38253 | Canola | nucleus | 37.92 | 44.42 |
| CDY22689 | Canola | nucleus | 42.13 | 44.39 |
| TraesCS5D01G273500.1 | Wheat | nucleus | 50.78 | 44.21 |
| TraesCS5A01G265600.1 | Wheat | nucleus | 50.78 | 44.21 |
| Os09t0489500-02 | Rice | nucleus | 51.22 | 44.17 |
| TraesCS5B01G265300.1 | Wheat | nucleus | 51.44 | 44.11 |
| CDX85782 | Canola | nucleus | 33.48 | 41.71 |
| CDY40074 | Canola | nucleus | 33.48 | 41.71 |
| CDX95068 | Canola | nucleus | 43.46 | 41.0 |
| HORVU5Hr1G073410.1 | Barley | nucleus | 51.44 | 40.92 |
| CDY21336 | Canola | nucleus | 37.92 | 40.91 |
| CDY08810 | Canola | nucleus | 33.26 | 40.87 |
| CDX93571 | Canola | nucleus | 43.24 | 40.8 |
| CDY06309 | Canola | nucleus | 43.24 | 40.29 |
| CDX69866 | Canola | nucleus | 32.37 | 40.11 |
| CDY21625 | Canola | nucleus | 32.37 | 40.11 |
| CDY37811 | Canola | nucleus | 32.59 | 39.73 |
| CDY33975 | Canola | nucleus | 32.59 | 39.73 |
| CDY14552 | Canola | nucleus | 32.15 | 39.51 |
| CDY38608 | Canola | nucleus | 37.69 | 38.46 |
| CDX95999 | Canola | nucleus | 37.69 | 38.46 |
| CDX88399 | Canola | nucleus | 36.59 | 38.37 |
| CDY18683 | Canola | cytosol | 31.49 | 38.17 |
| CDX81273 | Canola | nucleus | 32.82 | 38.05 |
| CDX87494 | Canola | nucleus | 36.81 | 37.39 |
| CDY00417 | Canola | mitochondrion | 15.08 | 29.31 |
| CDX79240 | Canola | nucleus | 32.15 | 25.44 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | MapMan:15.5.4.7.1 | GO:A0A078BZF4 | EnsemblPlants:CDX70061 | ProteinID:CDX70061 |
| ProteinID:CDX70061.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00136162001 | InterPro:IPR004827 | InterPro:IPR025422 |
| PFAM:PF00170 | PFAM:PF14144 | ScanProsite:PS00036 | PFscan:PS50217 | PFscan:PS51806 | PANTHER:PTHR22952 |
| PANTHER:PTHR22952:SF241 | SMART:SM00338 | SUPFAM:SSF57959 | InterPro:TGA_domain | UniParc:UPI0004EE9249 | InterPro:bZIP |
| SEG:seg | : | : | : | : | : |
Description
BnaA10g24100D
Coordinates
chrLK031790:-:2922123..2927654
Molecular Weight (calculated)
50184.4 Da
IEP (calculated)
7.232
GRAVY (calculated)
-0.558
Length
451 amino acids
Sequence
(BLAST)
(BLAST)
001: MQGHHQNHHQ QLSSASATSS NGNFMNKDGY DLGEIDPSLF LYLDGQGHHD QPSTAPLPHH HTTQNLAMRP PTSTLNIFPS KPMHIEPPPS SSTPNAVAPS
101: GSTRPSSEPS MDLTNHSQFQ LPQPSKSIKK EGNRKGLASS DHDTPKSSDP KTLRRLAQNR EAARKSRLRK KAYVQQLESC RIKLTQLEQE IQRARSQGVF
201: YGGSLMGGDQ QQGGMPIGPG YTSSAEAAVF DMEYTRWLEE QQRLLTELRV ATQEHLAENE LRMFVDTCLA HYDHLINLKA MVAKTDVFHL ISGAWKTPAE
301: RCFLWMGGFR PSEIIKVIVN QIEPLTEQQI VGICGLQQST QEAEEALSQG LEALNQSLSD SIVSDSLSPA SAQLPPHLSN FMSHMSLALN KLSSLEGFVL
401: QADNLRHQTI HRLNQLLTTR QEARCILAVA EYFHRLQALS SLWLARPRQD G
101: GSTRPSSEPS MDLTNHSQFQ LPQPSKSIKK EGNRKGLASS DHDTPKSSDP KTLRRLAQNR EAARKSRLRK KAYVQQLESC RIKLTQLEQE IQRARSQGVF
201: YGGSLMGGDQ QQGGMPIGPG YTSSAEAAVF DMEYTRWLEE QQRLLTELRV ATQEHLAENE LRMFVDTCLA HYDHLINLKA MVAKTDVFHL ISGAWKTPAE
301: RCFLWMGGFR PSEIIKVIVN QIEPLTEQQI VGICGLQQST QEAEEALSQG LEALNQSLSD SIVSDSLSPA SAQLPPHLSN FMSHMSLALN KLSSLEGFVL
401: QADNLRHQTI HRLNQLLTTR QEARCILAVA EYFHRLQALS SLWLARPRQD G
001: MQGHHQNHHQ HLSSSSATSS HGNFMNKDGY DIGEIDPSLF LYLDGQGHHD PPSTAPSPLH HHHTTQNLAM RPPTSTLNIF PSQPMHIEPP PSSTHNTDNT
101: RLVPAAQPSG STRPASDPSM DLTNHSQFHQ PPQGSKSIKK EGNRKGLASS DHDIPKSSDP KTLRRLAQNR EAARKSRLRK KAYVQQLESC RIKLTQLEQE
201: IQRARSQGVF FGGSLIGGDQ QQGGLPIGPG NISSEAAVFD MEYARWLEEQ QRLLNELRVA TQEHLSENEL RMFVDTCLAH YDHLINLKAM VAKTDVFHLI
301: SGAWKTPAER CFLWMGGFRP SEIIKVIVNQ IEPLTEQQIV GICGLQQSTQ EAEEALSQGL EALNQSLSDS IVSDSLPPAS APLPPHLSNF MSHMSLALNK
401: LSALEGFVLQ ADNLRHQTIH RLNQLLTTRQ EARCLLAVAE YFHRLQALSS LWLARPRQDG
101: RLVPAAQPSG STRPASDPSM DLTNHSQFHQ PPQGSKSIKK EGNRKGLASS DHDIPKSSDP KTLRRLAQNR EAARKSRLRK KAYVQQLESC RIKLTQLEQE
201: IQRARSQGVF FGGSLIGGDQ QQGGLPIGPG NISSEAAVFD MEYARWLEEQ QRLLNELRVA TQEHLSENEL RMFVDTCLAH YDHLINLKAM VAKTDVFHLI
301: SGAWKTPAER CFLWMGGFRP SEIIKVIVNQ IEPLTEQQIV GICGLQQSTQ EAEEALSQGL EALNQSLSDS IVSDSLPPAS APLPPHLSNF MSHMSLALNK
401: LSALEGFVLQ ADNLRHQTIH RLNQLLTTRQ EARCLLAVAE YFHRLQALSS LWLARPRQDG
Arabidopsis Description
TGA10Transcription factor TGA10 [Source:UniProtKB/Swiss-Prot;Acc:E3VNM4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.