Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH71904 | Soybean | nucleus | 88.59 | 94.63 |
| KRH67029 | Soybean | nucleus | 74.47 | 78.41 |
| KRG95350 | Soybean | nucleus | 74.27 | 78.21 |
| VIT_08s0007g06160.t01 | Wine grape | nucleus | 68.86 | 72.51 |
| PGSC0003DMT400029743 | Potato | nucleus, plastid | 51.45 | 70.0 |
| CDY71150 | Canola | nucleus, plastid | 25.53 | 66.67 |
| Bra009233.1-P | Field mustard | cytosol | 35.78 | 66.07 |
| Solyc10g080410.1.1 | Tomato | nucleus | 58.03 | 65.36 |
| PGSC0003DMT400060865 | Potato | nucleus | 58.22 | 65.29 |
| GSMUA_Achr9P27700_001 | Banana | nucleus | 47.0 | 64.8 |
| Solyc10g078670.1.1 | Tomato | nucleus | 59.57 | 63.24 |
| CDX70061 | Canola | nucleus | 54.55 | 62.53 |
| AT5G06839.3 | Thale cress | nucleus | 55.32 | 62.17 |
| CDX98963 | Canola | nucleus | 54.16 | 62.08 |
| GSMUA_Achr3P11150_001 | Banana | nucleus | 48.74 | 60.87 |
| CDY70235 | Canola | nucleus | 42.55 | 60.44 |
| Bra005914.1-P | Field mustard | nucleus | 50.68 | 60.37 |
| CDY70396 | Canola | mitochondrion | 23.79 | 58.85 |
| CDY70714 | Canola | nucleus | 39.85 | 58.52 |
| KRH36324 | Soybean | nucleus | 36.17 | 56.33 |
| KRH66777 | Soybean | nucleus | 31.14 | 55.52 |
| Zm00001d020938_P002 | Maize | nucleus | 50.29 | 53.5 |
| KXG35912 | Sorghum | nucleus | 50.48 | 52.2 |
| Zm00001d006027_P002 | Maize | nucleus | 47.58 | 48.91 |
| TraesCS5A01G265600.1 | Wheat | nucleus | 48.94 | 48.84 |
| TraesCS5D01G273500.1 | Wheat | nucleus | 48.74 | 48.65 |
| Os09t0489500-02 | Rice | nucleus | 49.13 | 48.57 |
| TraesCS5B01G265300.1 | Wheat | nucleus | 48.94 | 48.1 |
| GSMUA_Achr9P20200_001 | Banana | plastid | 50.87 | 48.08 |
| KRG97639 | Soybean | nucleus | 33.46 | 47.79 |
| KRH31239 | Soybean | nucleus | 33.08 | 46.98 |
| HORVU5Hr1G073410.1 | Barley | nucleus | 49.52 | 45.15 |
| KRG93068 | Soybean | nucleus | 38.49 | 44.82 |
| KRH63045 | Soybean | cytosol | 8.12 | 44.68 |
| KRH53141 | Soybean | nucleus | 29.59 | 43.1 |
| KRH66771 | Soybean | nucleus | 38.3 | 43.04 |
| KRG95103 | Soybean | nucleus | 37.91 | 42.7 |
| KRH59415 | Soybean | nucleus | 30.37 | 42.43 |
| KRH26635 | Soybean | nucleus | 40.04 | 42.42 |
| KRH22685 | Soybean | nucleus | 39.46 | 41.63 |
| KRH16629 | Soybean | nucleus | 29.79 | 41.62 |
| KRH20680 | Soybean | nucleus | 37.72 | 41.58 |
| KRG90784 | Soybean | nucleus | 36.56 | 41.54 |
| KRH35977 | Soybean | nucleus | 36.56 | 41.45 |
| KRH43266 | Soybean | nucleus | 30.37 | 41.42 |
| KRH64780 | Soybean | nucleus | 28.82 | 41.16 |
| KRH18838 | Soybean | nucleus | 29.4 | 41.08 |
| KRH30432 | Soybean | nucleus | 38.88 | 40.77 |
| KRH21813 | Soybean | nucleus | 12.57 | 40.37 |
| KRH25227 | Soybean | nucleus | 39.07 | 40.32 |
| KRH39187 | Soybean | cytosol, extracellular, nucleus | 13.54 | 39.33 |
| KRH13334 | Soybean | nucleus | 37.52 | 39.03 |
| KRH75411 | Soybean | nucleus | 36.56 | 38.89 |
| KRH70569 | Soybean | nucleus | 35.01 | 38.76 |
| KRG92164 | Soybean | nucleus | 15.67 | 34.47 |
| KRH34622 | Soybean | cytosol | 15.09 | 33.77 |
Protein Annotations
| Gene3D:1.20.5.170 | EntrezGene:100800059 | MapMan:15.5.4.1 | MapMan:15.5.4.7.1 | EMBL:ACUP02006219 | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_10G092100 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR004827 | InterPro:IPR025422 | UniProt:K7LI97 | EnsemblPlants:KRH32997 |
| ProteinID:KRH32997 | ProteinID:KRH32997.1 | PFAM:PF00170 | PFAM:PF14144 | ScanProsite:PS00036 | PFscan:PS50217 |
| PFscan:PS51806 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF241 | SMART:SM00338 | SUPFAM:SSF57959 | InterPro:TGA_domain |
| UniParc:UPI000296DDE8 | InterPro:bZIP | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr10:+:12738719..12747206
Molecular Weight (calculated)
57924.9 Da
IEP (calculated)
7.099
GRAVY (calculated)
-0.579
Length
517 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFSIAVDKL EEEAQQQQQE QETKSLGSSL NIVMASSSVK SNTNSTTQLE PFLPPLHLHH QQQPPQHHFH HHQIPDQQIS FGMMPSSSLA SIPGNFLSKD
101: SGAYDLGELD QAFFLYLEGQ ADPSSVQDQK QNSSSGMRPP PTLNIFPSQP MHAVPPSNSK VNMGLPSTQT STGSKRQPES SMAKPNPHTE APSAPEPPKA
201: VKREGNRKGT TSSSEQEAPK TPDPKTLRRL AQNREAARKS RLRKKAYVQQ LESSRIKLNQ IEQELQRSRA QGILMGGNTL LGGEQGFPMA MSGISSEAAM
301: FDVEYARWLE EHHRIVCELR AALQEHLHEN ELRLYVDNCL AHYDQVMSLK SMVAKIDVFH LVFGMWKTPA ERCFMWIGGF RPSELIKIIL GQIEPLTEQQ
401: ILGICGLQQS TQEAEEALSQ GLDALNQSLS ETITSDSLWC PPNMNNYMGQ MVVAMNKLST LESFVRQADN LRHQTIHRLH QLLTTRQAAR CLVAISEYFH
501: RLRALSSLWS THPRQDQ
101: SGAYDLGELD QAFFLYLEGQ ADPSSVQDQK QNSSSGMRPP PTLNIFPSQP MHAVPPSNSK VNMGLPSTQT STGSKRQPES SMAKPNPHTE APSAPEPPKA
201: VKREGNRKGT TSSSEQEAPK TPDPKTLRRL AQNREAARKS RLRKKAYVQQ LESSRIKLNQ IEQELQRSRA QGILMGGNTL LGGEQGFPMA MSGISSEAAM
301: FDVEYARWLE EHHRIVCELR AALQEHLHEN ELRLYVDNCL AHYDQVMSLK SMVAKIDVFH LVFGMWKTPA ERCFMWIGGF RPSELIKIIL GQIEPLTEQQ
401: ILGICGLQQS TQEAEEALSQ GLDALNQSLS ETITSDSLWC PPNMNNYMGQ MVVAMNKLST LESFVRQADN LRHQTIHRLH QLLTTRQAAR CLVAISEYFH
501: RLRALSSLWS THPRQDQ
001: MQGHHQNHHQ HLSSSSATSS HGNFMNKDGY DIGEIDPSLF LYLDGQGHHD PPSTAPSPLH HHHTTQNLAM RPPTSTLNIF PSQPMHIEPP PSSTHNTDNT
101: RLVPAAQPSG STRPASDPSM DLTNHSQFHQ PPQGSKSIKK EGNRKGLASS DHDIPKSSDP KTLRRLAQNR EAARKSRLRK KAYVQQLESC RIKLTQLEQE
201: IQRARSQGVF FGGSLIGGDQ QQGGLPIGPG NISSEAAVFD MEYARWLEEQ QRLLNELRVA TQEHLSENEL RMFVDTCLAH YDHLINLKAM VAKTDVFHLI
301: SGAWKTPAER CFLWMGGFRP SEIIKVIVNQ IEPLTEQQIV GICGLQQSTQ EAEEALSQGL EALNQSLSDS IVSDSLPPAS APLPPHLSNF MSHMSLALNK
401: LSALEGFVLQ ADNLRHQTIH RLNQLLTTRQ EARCLLAVAE YFHRLQALSS LWLARPRQDG
101: RLVPAAQPSG STRPASDPSM DLTNHSQFHQ PPQGSKSIKK EGNRKGLASS DHDIPKSSDP KTLRRLAQNR EAARKSRLRK KAYVQQLESC RIKLTQLEQE
201: IQRARSQGVF FGGSLIGGDQ QQGGLPIGPG NISSEAAVFD MEYARWLEEQ QRLLNELRVA TQEHLSENEL RMFVDTCLAH YDHLINLKAM VAKTDVFHLI
301: SGAWKTPAER CFLWMGGFRP SEIIKVIVNQ IEPLTEQQIV GICGLQQSTQ EAEEALSQGL EALNQSLSDS IVSDSLPPAS APLPPHLSNF MSHMSLALNK
401: LSALEGFVLQ ADNLRHQTIH RLNQLLTTRQ EARCLLAVAE YFHRLQALSS LWLARPRQDG
Arabidopsis Description
TGA10Transcription factor TGA10 [Source:UniProtKB/Swiss-Prot;Acc:E3VNM4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.