Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400060865 | Potato | nucleus | 96.08 | 95.66 |
| CDY71150 | Canola | nucleus, plastid | 28.1 | 65.15 |
| Solyc10g078670.1.1 | Tomato | nucleus | 67.76 | 63.86 |
| KRH67029 | Soybean | nucleus | 67.54 | 63.14 |
| KRH71904 | Soybean | nucleus | 66.23 | 62.81 |
| KRG95350 | Soybean | nucleus | 66.88 | 62.53 |
| VIT_08s0007g06160.t01 | Wine grape | nucleus | 64.71 | 60.49 |
| Bra009233.1-P | Field mustard | cytosol | 36.38 | 59.64 |
| CDX70061 | Canola | nucleus | 57.95 | 58.98 |
| CDX98963 | Canola | nucleus | 57.95 | 58.98 |
| AT5G06839.3 | Thale cress | nucleus | 58.39 | 58.26 |
| KRH32997 | Soybean | nucleus | 65.36 | 58.03 |
| GSMUA_Achr9P27700_001 | Banana | nucleus | 47.06 | 57.6 |
| GSMUA_Achr3P11150_001 | Banana | nucleus | 51.42 | 57.0 |
| Bra005914.1-P | Field mustard | nucleus | 53.59 | 56.68 |
| CDY70235 | Canola | nucleus | 44.23 | 55.77 |
| Solyc11g064950.1.1 | Tomato | nucleus | 39.0 | 55.25 |
| CDY70396 | Canola | mitochondrion | 24.84 | 54.55 |
| CDY70714 | Canola | nucleus | 41.39 | 53.98 |
| Solyc01g008730.2.1 | Tomato | nucleus | 37.91 | 53.21 |
| Zm00001d020938_P002 | Maize | nucleus | 51.2 | 48.35 |
| KXG35912 | Sorghum | nucleus | 51.85 | 47.6 |
| GSMUA_Achr9P20200_001 | Banana | plastid | 54.47 | 45.7 |
| Solyc11g068370.1.1 | Tomato | nucleus | 37.04 | 45.7 |
| Os09t0489500-02 | Rice | nucleus | 51.2 | 44.93 |
| Solyc10g080780.1.1 | Tomato | cytosol | 26.14 | 44.61 |
| Zm00001d006027_P002 | Maize | nucleus | 48.37 | 44.14 |
| TraesCS5D01G273500.1 | Wheat | nucleus | 49.02 | 43.44 |
| TraesCS5A01G265600.1 | Wheat | nucleus | 49.02 | 43.44 |
| TraesCS5B01G265300.1 | Wheat | nucleus | 49.24 | 42.97 |
| Solyc04g011670.2.1 | Tomato | nucleus | 34.42 | 42.25 |
| Solyc12g056860.1.1 | Tomato | nucleus | 31.37 | 41.38 |
| Solyc04g054320.2.1 | Tomato | nucleus | 33.12 | 41.08 |
| Solyc04g072460.2.1 | Tomato | nucleus | 32.24 | 41.0 |
| Solyc10g080770.1.1 | Tomato | nucleus | 39.65 | 40.44 |
| HORVU5Hr1G073410.1 | Barley | nucleus | 49.24 | 39.86 |
| Solyc06g074320.2.1 | Tomato | nucleus | 43.36 | 39.72 |
| Solyc05g009660.2.1 | Tomato | nucleus | 40.3 | 38.22 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | MapMan:15.5.4.7.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR004827 |
| InterPro:IPR025422 | UniProt:K4D2T1 | PFAM:PF07716 | PFAM:PF14144 | ScanProsite:PS00036 | PFscan:PS50217 |
| PFscan:PS51806 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF241 | SMART:SM00338 | SUPFAM:SSF57959 | EnsemblPlantsGene:Solyc10g080410.1 |
| EnsemblPlants:Solyc10g080410.1.1 | InterPro:TGA_domain | UniParc:UPI00027694A7 | InterPro:bZIP | : | : |
Description
No Description!
Coordinates
chr10:-:61684147..61690468
Molecular Weight (calculated)
52122.4 Da
IEP (calculated)
7.048
GRAVY (calculated)
-0.663
Length
459 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSSNHQISF INQHQFFHDP RQQQQMENHK NHQISFGLSS ANPGNFINKE NNGGAYDLGE LDQALFLYLD GQDPSSSSIQ DHRQNNYGMR PPTLNIFPSQ
101: PMHIEPSSTK ANNNEQVSQA TNGSKKSSQP SMDKSEPPKV TKGEGSRKVS TSSPEQDAPK TSDPKTLRRL AQNREAARKS RIRKKAYVQQ LETSRIRLTQ
201: LEHEIQRARS QGFHVGGNVL LGGDQGFQLI NRTNISSDAA VFDLEYARWL EEHHRLICEL RNAVHEEQLQ EDELRIYVEN CVVHYDNIMN LKGMLAKSDV
301: FHLVSGLWKS PAERCFLWIG DFRPSEILKI IMCQIEALTE NQLLGMCGLQ KSTQEAEDAL SQGLETLNQS LSDTIIASDA LILGNNNENM GNYMALAINQ
401: LSTVEAFLRQ ADNLRHQTIH RLHQILTTRQ AARCFIAIGD YFHRLRALSS LWLTRPRHE
101: PMHIEPSSTK ANNNEQVSQA TNGSKKSSQP SMDKSEPPKV TKGEGSRKVS TSSPEQDAPK TSDPKTLRRL AQNREAARKS RIRKKAYVQQ LETSRIRLTQ
201: LEHEIQRARS QGFHVGGNVL LGGDQGFQLI NRTNISSDAA VFDLEYARWL EEHHRLICEL RNAVHEEQLQ EDELRIYVEN CVVHYDNIMN LKGMLAKSDV
301: FHLVSGLWKS PAERCFLWIG DFRPSEILKI IMCQIEALTE NQLLGMCGLQ KSTQEAEDAL SQGLETLNQS LSDTIIASDA LILGNNNENM GNYMALAINQ
401: LSTVEAFLRQ ADNLRHQTIH RLHQILTTRQ AARCFIAIGD YFHRLRALSS LWLTRPRHE
001: MQGHHQNHHQ HLSSSSATSS HGNFMNKDGY DIGEIDPSLF LYLDGQGHHD PPSTAPSPLH HHHTTQNLAM RPPTSTLNIF PSQPMHIEPP PSSTHNTDNT
101: RLVPAAQPSG STRPASDPSM DLTNHSQFHQ PPQGSKSIKK EGNRKGLASS DHDIPKSSDP KTLRRLAQNR EAARKSRLRK KAYVQQLESC RIKLTQLEQE
201: IQRARSQGVF FGGSLIGGDQ QQGGLPIGPG NISSEAAVFD MEYARWLEEQ QRLLNELRVA TQEHLSENEL RMFVDTCLAH YDHLINLKAM VAKTDVFHLI
301: SGAWKTPAER CFLWMGGFRP SEIIKVIVNQ IEPLTEQQIV GICGLQQSTQ EAEEALSQGL EALNQSLSDS IVSDSLPPAS APLPPHLSNF MSHMSLALNK
401: LSALEGFVLQ ADNLRHQTIH RLNQLLTTRQ EARCLLAVAE YFHRLQALSS LWLARPRQDG
101: RLVPAAQPSG STRPASDPSM DLTNHSQFHQ PPQGSKSIKK EGNRKGLASS DHDIPKSSDP KTLRRLAQNR EAARKSRLRK KAYVQQLESC RIKLTQLEQE
201: IQRARSQGVF FGGSLIGGDQ QQGGLPIGPG NISSEAAVFD MEYARWLEEQ QRLLNELRVA TQEHLSENEL RMFVDTCLAH YDHLINLKAM VAKTDVFHLI
301: SGAWKTPAER CFLWMGGFRP SEIIKVIVNQ IEPLTEQQIV GICGLQQSTQ EAEEALSQGL EALNQSLSDS IVSDSLPPAS APLPPHLSNF MSHMSLALNK
401: LSALEGFVLQ ADNLRHQTIH RLNQLLTTRQ EARCLLAVAE YFHRLQALSS LWLARPRQDG
Arabidopsis Description
TGA10Transcription factor TGA10 [Source:UniProtKB/Swiss-Prot;Acc:E3VNM4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.