Factsheet for Zm00001d006027_P002

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d020938_P002	Maize	nucleus	86.48	89.51
KXG35912	Sorghum	nucleus	88.87	89.4
Os09t0489500-02	Rice	nucleus	78.93	75.91
TraesCS5A01G265600.1	Wheat	nucleus	74.55	72.39
TraesCS5D01G273500.1	Wheat	nucleus	73.96	71.81
TraesCS5B01G265300.1	Wheat	nucleus	74.16	70.91
HORVU5Hr1G073410.1	Barley	nucleus	75.15	66.67
GSMUA_Achr9P27700_001	Banana	nucleus	44.53	59.73
GSMUA_Achr3P11150_001	Banana	nucleus	48.51	58.94
CDY71150	Canola	nucleus, plastid	22.86	58.08
PGSC0003DMT400029743	Potato	nucleus, plastid	43.54	57.63
VIT_08s0007g06160.t01	Wine grape	nucleus	52.49	53.77
CDY70396	Canola	mitochondrion	22.07	53.11
KRH67029	Soybean	nucleus	51.69	52.95
Bra009233.1-P	Field mustard	cytosol	29.42	52.86
KRG95350	Soybean	nucleus	51.49	52.75
Solyc10g078670.1.1	Tomato	nucleus	49.9	51.54
Zm00001d023424_P001	Maize	nucleus	31.61	51.29
Zm00001d022542_P002	Maize	nucleus	33.8	51.05
KRH71904	Soybean	nucleus	48.11	50.0
CDY70714	Canola	nucleus	34.79	49.72
CDX98963	Canola	nucleus	44.53	49.67
CDX70061	Canola	nucleus	44.53	49.67
AT5G06839.3	Thale cress	nucleus	44.93	49.13
CDY70235	Canola	nucleus	35.39	48.9
PGSC0003DMT400060865	Potato	nucleus	44.53	48.59
Solyc10g080410.1.1	Tomato	nucleus	44.14	48.37
Zm00001d005143_P001	Maize	nucleus	39.16	47.93
KRH32997	Soybean	nucleus	48.91	47.58
Bra005914.1-P	Field mustard	nucleus	40.76	47.23
GSMUA_Achr9P20200_001	Banana	plastid	48.31	44.42
Zm00001d015845_P001	Maize	cytosol	23.46	43.87
Zm00001d010658_P001	Maize	nucleus	29.82	43.48
Zm00001d016312_P001	Maize	cytosol	7.95	43.01
Zm00001d028936_P001	Maize	nucleus	32.01	41.18
Zm00001d008225_P001	Maize	nucleus	34.0	40.71
Zm00001d046751_P001	Maize	nucleus	36.38	39.96
Zm00001d037316_P008	Maize	cytosol, nucleus, peroxisome, plastid	26.04	38.64
Zm00001d052543_P001	Maize	nucleus	36.58	37.86
Zm00001d037317_P003	Maize	nucleus	32.21	37.5
Zm00001d026398_P006	Maize	nucleus	30.62	37.38
Zm00001d043153_P001	Maize	nucleus	31.01	36.97
Zm00001d024160_P003	Maize	nucleus	30.22	35.85
Zm00001d015846_P001	Maize	nucleus	14.31	35.64
Zm00001d012553_P003	Maize	nucleus	32.21	34.47
Zm00001d002143_P002	Maize	cytosol	29.03	33.26
Zm00001d038296_P001	Maize	nucleus	34.19	33.14
Zm00001d041428_P001	Maize	cytosol	9.94	32.05
Zm00001d012294_P009	Maize	nucleus	33.2	30.09
Zm00001d042777_P006	Maize	nucleus	34.99	27.08
Zm00001d045823_P001	Maize	cytosol	10.74	17.88

Protein Annotations

Gene3D:1.20.5.170	EntrezGene:100384496	MapMan:15.5.4.1	MapMan:15.5.4.7.1	UniProt:A0A1D6ES44	ncoils:Coil
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	InterPro:IPR004827	InterPro:IPR025422	ProteinID:ONM22553.1	ProteinID:ONM22557.1	PFAM:PF00170
PFAM:PF14144	ScanProsite:PS00036	PFscan:PS50217	PFscan:PS51806	PANTHER:PTHR22952	PANTHER:PTHR22952:SF179
SMART:SM00338	SUPFAM:SSF57959	InterPro:TGA_domain	UniParc:UPI0002218630	EnsemblPlantsGene:Zm00001d006027	EnsemblPlants:Zm00001d006027_P002
EnsemblPlants:Zm00001d006027_T002	InterPro:bZIP	SEG:seg	:	:	:

Description

bZIP-transcription factor 85bZIP transcription factor family protein

Coordinates

chr2:-:195561468..195570994

Molecular Weight (calculated)

56276.2 Da

IEP (calculated)

8.230

GRAVY (calculated)

-0.519

Length

503 amino acids

Sequence
(BLAST)

001: MQLQRSVDRP VHPSMVSGGS IKEQQHEMNI SFAMVNHHHH HQQPPSSSSS SSMHAAAASF MSGKEASSGA YAYDHLGELD QALFMYLDHG RSHGGTPQQE
101: QRQTLNIFPM HVEPSPKGEI SLVLPPAPVG YKQPRSPDHH HHQHAAMEEL LAESRRQQEH QPFAAAAEPA AAPGMIKGVK PLAKKDHRRG TSTTERDPKT
201: LRRLAQNREA ARKSRLRKKA YIQQLESSRI RLAQLEQELH TTRAHQGVFF PNGGILAGQS VVGKGVPIGG IDSLSSEAAM FDVEYGRWQE EHYRLMYELR
301: AALQQHLPEG ELQMYVESCL AHHDEMLGIK EGAIKGDVFH LISGVWRSPA ERCFLWLGGF RPSEVIKMLL SHVDPLTEQQ IVAVYGLQQS ALETEETLSQ
401: GMEALYQSLS DTILSDALSC PSNVAIYMGQ MAAAMNKLST LKGFVRQAEN LRQQTLHRLH QILTARQMAR SLLAMSDYFH RLRTLSSLWV TRPRAPQEQQ
501: GHS

Best Arabidopsis Sequence Match ( AT5G06839.3 )
(BLAST)

001: MQGHHQNHHQ HLSSSSATSS HGNFMNKDGY DIGEIDPSLF LYLDGQGHHD PPSTAPSPLH HHHTTQNLAM RPPTSTLNIF PSQPMHIEPP PSSTHNTDNT
101: RLVPAAQPSG STRPASDPSM DLTNHSQFHQ PPQGSKSIKK EGNRKGLASS DHDIPKSSDP KTLRRLAQNR EAARKSRLRK KAYVQQLESC RIKLTQLEQE
201: IQRARSQGVF FGGSLIGGDQ QQGGLPIGPG NISSEAAVFD MEYARWLEEQ QRLLNELRVA TQEHLSENEL RMFVDTCLAH YDHLINLKAM VAKTDVFHLI
301: SGAWKTPAER CFLWMGGFRP SEIIKVIVNQ IEPLTEQQIV GICGLQQSTQ EAEEALSQGL EALNQSLSDS IVSDSLPPAS APLPPHLSNF MSHMSLALNK
401: LSALEGFVLQ ADNLRHQTIH RLNQLLTTRQ EARCLLAVAE YFHRLQALSS LWLARPRQDG

Arabidopsis Description

TGA10Transcription factor TGA10 [Source:UniProtKB/Swiss-Prot;Acc:E3VNM4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.