Factsheet for Zm00001d015846_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG29702	Sorghum	nucleus	68.81	28.48
TraesCS6B01G193200.2	Wheat	nucleus	52.97	23.36
TraesCS6D01G154400.1	Wheat	nucleus	52.97	22.96
HORVU0Hr1G015710.1	Barley	nucleus	51.49	22.61
TraesCS6A01G165800.1	Wheat	nucleus	51.98	22.53
Zm00001d046751_P001	Maize	nucleus	42.08	18.56
Zm00001d005143_P001	Maize	nucleus	32.67	16.06
Zm00001d020938_P002	Maize	nucleus	37.13	15.43
Zm00001d006027_P002	Maize	nucleus	35.64	14.31
Zm00001d022542_P002	Maize	nucleus	21.29	12.91
Zm00001d043153_P001	Maize	nucleus	26.24	12.56
Zm00001d010658_P001	Maize	nucleus	20.79	12.17
Zm00001d008225_P001	Maize	nucleus	25.25	12.14
Zm00001d038296_P001	Maize	nucleus	30.69	11.95
Zm00001d052543_P001	Maize	nucleus	27.72	11.52
Zm00001d012553_P003	Maize	nucleus	26.73	11.49
Zm00001d012294_P009	Maize	nucleus	29.7	10.81
Zm00001d023424_P001	Maize	nucleus	16.34	10.65
Zm00001d024160_P003	Maize	nucleus	21.78	10.38
Zm00001d037317_P003	Maize	nucleus	21.29	9.95
Zm00001d037316_P008	Maize	cytosol, nucleus, peroxisome, plastid	16.34	9.73
Zm00001d026398_P006	Maize	nucleus	19.8	9.71
Zm00001d042777_P006	Maize	nucleus	29.7	9.23
Os02t0194900-00	Rice	nucleus	16.34	8.85
Zm00001d028936_P001	Maize	nucleus	15.35	7.93
Zm00001d045823_P001	Maize	cytosol	9.9	6.62
Zm00001d002143_P002	Maize	cytosol	13.86	6.38
Zm00001d041428_P001	Maize	cytosol	1.98	2.56
Zm00001d015845_P001	Maize	cytosol	2.48	1.86
Zm00001d016312_P001	Maize	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	UniProt:A0A1D6H494	ProteinID:AQK69647.1	ncoils:Coil	GO:GO:0003674
GO:GO:0003700	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR004827	PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952
PANTHER:PTHR22952:SF370	SUPFAM:SSF57959	UniParc:UPI000842AD78	EnsemblPlantsGene:Zm00001d015846	EnsemblPlants:Zm00001d015846_P001	EnsemblPlants:Zm00001d015846_T001
InterPro:bZIP	SEG:seg	:	:	:	:

Description

bZIP-transcription factor 28bZIP transcription factor family protein

Coordinates

chr5:-:125802400..125805852

Molecular Weight (calculated)

21762.4 Da

IEP (calculated)

10.553

GRAVY (calculated)

-0.938

Length

202 amino acids

Sequence
(BLAST)

001: MRRLLPQTQG PSRKEPAGGG GYDDMAEFDQ ALFLYLNSSQ DQASVIQDQP QLCAETLNIF PSEPMHVVEP AAPKESMGAT TNNTAWNNAG AGPSKQPPSN
101: LPSRTTATPA GPRKDGSKPP AAVKREGSSS GGAMGSGTPS TSNQQEGPTR TSDAKTLRRL AQNREAARKS RLRKKAYIQN LETSRVRLAH LEQEVHRSRT
201: QV

Best Arabidopsis Sequence Match ( AT5G06839.3 )
(BLAST)

001: MQGHHQNHHQ HLSSSSATSS HGNFMNKDGY DIGEIDPSLF LYLDGQGHHD PPSTAPSPLH HHHTTQNLAM RPPTSTLNIF PSQPMHIEPP PSSTHNTDNT
101: RLVPAAQPSG STRPASDPSM DLTNHSQFHQ PPQGSKSIKK EGNRKGLASS DHDIPKSSDP KTLRRLAQNR EAARKSRLRK KAYVQQLESC RIKLTQLEQE
201: IQRARSQGVF FGGSLIGGDQ QQGGLPIGPG NISSEAAVFD MEYARWLEEQ QRLLNELRVA TQEHLSENEL RMFVDTCLAH YDHLINLKAM VAKTDVFHLI
301: SGAWKTPAER CFLWMGGFRP SEIIKVIVNQ IEPLTEQQIV GICGLQQSTQ EAEEALSQGL EALNQSLSDS IVSDSLPPAS APLPPHLSNF MSHMSLALNK
401: LSALEGFVLQ ADNLRHQTIH RLNQLLTTRQ EARCLLAVAE YFHRLQALSS LWLARPRQDG

Arabidopsis Description

TGA10Transcription factor TGA10 [Source:UniProtKB/Swiss-Prot;Acc:E3VNM4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.