Factsheet for Zm00001d038296_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU78097	Sorghum	nucleus	94.41	93.87
Os05t0443900-01	Rice	nucleus	71.48	76.65
TraesCS1B01G285800.1	Wheat	nucleus	74.18	73.19
TraesCS1D01G276100.2	Wheat	nucleus	73.8	72.81
TraesCS1A01G276600.2	Wheat	nucleus	73.22	72.24
HORVU1Hr1G073870.2	Barley	nucleus	72.64	72.08
Zm00001d012294_P009	Maize	nucleus	62.62	58.56
Zm00001d023424_P001	Maize	nucleus	34.1	57.1
GSMUA_Achr11P...	Banana	cytosol	26.01	55.79
Zm00001d042777_P006	Maize	nucleus	65.32	52.15
Solyc11g068370.1.1	Tomato	nucleus	37.38	52.15
GSMUA_Achr11P...	Banana	nucleus	47.59	50.2
PGSC0003DMT400067782	Potato	nucleus	31.41	49.54
Zm00001d022542_P002	Maize	nucleus	31.6	49.25
VIT_06s0080g00360.t01	Wine grape	nucleus	47.21	49.0
KRH22685	Soybean	nucleus	46.05	48.78
KRH26635	Soybean	nucleus	45.86	48.77
GSMUA_Achr5P26200_001	Banana	nucleus	37.96	48.52
GSMUA_Achr10P...	Banana	nucleus	43.93	48.31
Solyc06g074320.2.1	Tomato	nucleus	46.63	48.3
PGSC0003DMT400018306	Potato	nucleus	45.09	47.95
CDY22689	Canola	nucleus	39.5	47.9
Bra031622.1-P	Field mustard	nucleus	39.31	47.66
GSMUA_Achr3P22700_001	Banana	nucleus	45.86	47.04
CDX95068	Canola	nucleus	43.16	46.86
Bra018634.1-P	Field mustard	nucleus	42.77	46.74
KRH30432	Soybean	nucleus	44.32	46.65
KRH25227	Soybean	nucleus	44.89	46.51
AT1G08320.4	Thale cress	nucleus	42.77	46.15
CDX93571	Canola	nucleus	42.39	46.03
CDY06309	Canola	nucleus	42.0	45.04
Zm00001d052543_P001	Maize	nucleus	42.0	44.86
Zm00001d010658_P001	Maize	nucleus	29.29	44.06
Zm00001d016312_P001	Maize	cytosol	7.51	41.94
Zm00001d008225_P001	Maize	nucleus	33.53	41.43
Zm00001d037316_P008	Maize	cytosol, nucleus, peroxisome, plastid	25.43	38.94
Zm00001d028936_P001	Maize	nucleus	28.52	37.85
Zm00001d037317_P003	Maize	nucleus	31.02	37.27
Zm00001d020938_P002	Maize	nucleus	34.68	37.04
Zm00001d015845_P001	Maize	cytosol	18.88	36.43
Zm00001d026398_P006	Maize	nucleus	28.71	36.16
Zm00001d005143_P001	Maize	nucleus	28.32	35.77
Zm00001d043153_P001	Maize	nucleus	28.9	35.55
Zm00001d046751_P001	Maize	nucleus	31.02	35.15
Zm00001d006027_P002	Maize	nucleus	33.14	34.19
Zm00001d041428_P001	Maize	cytosol	10.21	33.97
Zm00001d024160_P003	Maize	nucleus	27.75	33.96
GSMUA_Achr11P...	Banana	nucleus	20.04	33.66
Zm00001d012553_P003	Maize	nucleus	30.06	33.19
Zm00001d002143_P002	Maize	cytosol	26.78	31.66
Zm00001d015846_P001	Maize	nucleus	11.95	30.69
Zm00001d045823_P001	Maize	cytosol	11.95	20.53

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	MapMan:15.5.4.7.1	UniProt:A0A1D6M550	ProteinID:AQK86249.1	ncoils:Coil
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	InterPro:IPR004827	InterPro:IPR025422	PFAM:PF00170	PFAM:PF14144	ScanProsite:PS00036
PFscan:PS50217	PFscan:PS51806	PANTHER:PTHR22952	PANTHER:PTHR22952:SF346	SMART:SM00338	SUPFAM:SSF57959
InterPro:TGA_domain	UniParc:UPI0008454780	EnsemblPlantsGene:Zm00001d038296	EnsemblPlants:Zm00001d038296_P001	EnsemblPlants:Zm00001d038296_T001	InterPro:bZIP
SEG:seg	:	:	:	:	:

Description

bZIP-transcription factor 87Putative bZIP transcription factor superfamily protein

Coordinates

chr6:+:153617288..153623323

Molecular Weight (calculated)

57068.3 Da

IEP (calculated)

6.368

GRAVY (calculated)

-0.445

Length

519 amino acids

Sequence
(BLAST)

001: MAQGEESSWC MASSDHGRAA PFVQAVACGT QRRASAAQPA NFLELQPAAA APYYFGELEE ALIHGTRTSV DHGMIGSDVD TERKTAGYLA ARPPTLEIFP
101: SWPMSHLQQP YSGNSHSVGS TTESSSGQNS MPQTELVSPG SMRADSGQRQ ELLMVTVDDY NYEQGLGAAA TTAPIFQQHA AGQDKGKHGS TRKDGRLLDA
201: KTERRLAQNR EAARKSRLRK KAYVQQLETS RIRLQQIEQE LHGARSQGLF PGGGGAAGDL SSGAVIFDME YARWLEDDTK HMTELQAVLQ PQIIDANLGA
301: IVEDCMRHYD ELFHLRAMLA RSDVFHLMTG LWATTAERCF LWMGGFRPSE ILKQMLIPQL DPLAEPQLIG MYNLQRSSEQ TEEALVQGLQ QLHQSLADAV
401: GASPLSDGAN VANYTALMAL ALDRLDTLES FYRQADSLRQ QTLHQMRRIL TTRQTARCFV SISEYHRRLR ALSSVWASSR PPTPPSEGVV AAAENVSPTG
501: TTTEQALPPY HHSQPFPGF

Best Arabidopsis Sequence Match ( AT1G08320.1 )
(BLAST)

001: MANHRMSEAT NHNHNHHLPY SLIHGLNNNH PSSGFINQDG SSSFDFGELE EAIVLQGVKY RNEEAKPPLL GGGGGATTLE MFPSWPIRTH QTLPTESSKS
101: GGESSDSGSA NFSGKAESQQ PESPMSSKHH LMLQPHHNNM ANSSSTSGLP STSRTLAPPK PSEDKRKATT SGKQLDAKTL RRLAQNREAA RKSRLRKKAY
201: VQQLESSRIK LSQLEQELQR ARSQGLFMGG CGPPGPNITS GAAIFDMEYG RWLEDDNRHM SEIRTGLQAH LSDNDLRLIV DGYIAHFDEI FRLKAVAAKA
301: DVFHLIIGTW MSPAERCFIW MAGFRPSDLI KILVSQMDLL TEQQLMGIYS LQHSSQQAEE ALSQGLEQLQ QSLIDTLAAS PVIDGMQQMA VALGKISNLE
401: GFIRQADNLR QQTVHQLRRI LTVRQAARCF LVIGEYYGRL RALSSLWLSR PRETLMSDET SCQTTTDLQI VQSSRNHFSN F

Arabidopsis Description

TGA9Transcription factor TGA9 [Source:UniProtKB/Swiss-Prot;Acc:Q93XM6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.