Factsheet for Solyc11g068370.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400067782	Potato	nucleus	84.14	95.14
Zm00001d023424_P001	Maize	nucleus	49.46	59.35
GSMUA_Achr11P...	Banana	cytosol	37.63	57.85
Bra031622.1-P	Field mustard	nucleus	65.86	57.24
Solyc11g064950.1.1	Tomato	nucleus	49.73	57.1
CDY22689	Canola	nucleus	65.32	56.78
Solyc06g074320.2.1	Tomato	nucleus	74.46	55.29
Solyc01g008730.2.1	Tomato	nucleus	47.85	54.43
HORVU4Hr1G025130.10	Barley	nucleus	52.42	53.72
VIT_06s0080g00360.t01	Wine grape	nucleus	72.04	53.6
Bra018634.1-P	Field mustard	nucleus	66.94	52.42
AT1G08320.4	Thale cress	nucleus	67.47	52.18
CDX93571	Canola	nucleus	66.4	51.67
CDX95068	Canola	nucleus	65.86	51.26
CDY06309	Canola	nucleus	66.4	51.03
KRH30432	Soybean	nucleus	66.67	50.3
KRH26635	Soybean	nucleus	65.86	50.2
KRH25227	Soybean	nucleus	67.47	50.1
KRH22685	Soybean	nucleus	65.05	49.39
GSMUA_Achr5P26200_001	Banana	nucleus	52.69	48.28
Solyc10g080780.1.1	Tomato	cytosol	32.8	45.35
GSMUA_Achr2P06770_001	Banana	nucleus	58.06	45.19
Os05t0443900-01	Rice	nucleus	58.6	45.04
GSMUA_Achr11P...	Banana	nucleus	58.6	44.31
GSMUA_Achr10P...	Banana	nucleus	55.91	44.07
KXG22976	Sorghum	nucleus	56.72	43.69
Os11t0152700-01	Rice	nucleus	55.91	42.98
Os12t0152900-01	Rice	nucleus	56.45	42.94
Solyc12g056860.1.1	Tomato	nucleus	40.05	42.82
OQU82891	Sorghum	nucleus	55.91	42.62
Zm00001d052543_P001	Maize	nucleus	55.38	42.39
Os01t0859500-01	Rice	nucleus	60.48	41.74
KXG33735	Sorghum	nucleus	58.87	41.09
Solyc04g072460.2.1	Tomato	nucleus	39.52	40.72
GSMUA_Achr3P22700_001	Banana	nucleus	54.84	40.32
Solyc10g080770.1.1	Tomato	nucleus	47.58	39.33
HORVU1Hr1G073870.2	Barley	nucleus	54.84	39.01
TraesCS4D01G129900.1	Wheat	nucleus	55.91	38.66
Solyc04g054320.2.1	Tomato	nucleus	38.44	38.65
TraesCS1A01G276600.2	Wheat	nucleus	54.3	38.4
TraesCS1B01G285800.1	Wheat	nucleus	54.3	38.4
TraesCS1D01G276100.2	Wheat	nucleus	54.3	38.4
TraesCS3A01G372400.2	Wheat	nucleus	59.14	38.39
TraesCS3B01G404800.2	Wheat	nucleus	59.14	38.39
TraesCS4A01G183400.2	Wheat	nucleus	55.65	38.26
TraesCS3D01G365200.3	Wheat	nucleus	59.14	37.93
Zm00001d012294_P009	Maize	nucleus	56.45	37.84
Solyc04g011670.2.1	Tomato	nucleus	37.9	37.7
Zm00001d038296_P001	Maize	nucleus	52.15	37.38
OQU78097	Sorghum	nucleus	52.15	37.16
TraesCS4B01G135000.1	Wheat	nucleus	56.45	37.1
Solyc10g080410.1.1	Tomato	nucleus	45.7	37.04
Solyc10g078670.1.1	Tomato	nucleus	47.58	36.34
Solyc05g009660.2.1	Tomato	nucleus	46.51	35.74
Zm00001d042777_P006	Maize	nucleus	59.14	33.85
HORVU3Hr1G084340.10	Barley	nucleus	40.59	26.54
GSMUA_Achr11P...	Banana	nucleus	20.7	24.92

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	MapMan:15.5.4.7.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR004827
InterPro:IPR025422	UniProt:K4D9Z5	PFAM:PF00170	PFAM:PF14144	ScanProsite:PS00036	PFscan:PS50217
PFscan:PS51806	PANTHER:PTHR22952	PANTHER:PTHR22952:SF215	SMART:SM00338	SUPFAM:SSF57959	EnsemblPlantsGene:Solyc11g068370.1
EnsemblPlants:Solyc11g068370.1.1	InterPro:TGA_domain	UniParc:UPI000276A480	InterPro:bZIP	SEG:seg	:

Description

No Description!

Coordinates

chr11:+:53127214..53136052

Molecular Weight (calculated)

41737.7 Da

IEP (calculated)

8.338

GRAVY (calculated)

-0.459

Length

372 amino acids

Sequence
(BLAST)

001: MFPSWPTKVH DTLRGSSKSI GGEQSSDSDS ALNTTISSRG EANVELESPS KSNYEKKSAG SNSDRVTDAK TLRRLAQNRE AARKSRLRKK AYVQQLETSR
101: MRLAQLEQEL QRARSQGIFM GGGSTGPNIS SGASMFDMDY SRWLDDDQRQ ICELRTALQA HLGDGELRII VDAYIAHYDH IFLLKGVVAK SDLFHLLTGI
201: WASPAERGFL WLGGFKPSDL IKMLITQLDP LTQQQIVGIY SLQQSSQQAE EALSQGLEQL KQSLIETIAT CSVNDGMHHM AIALGKLANL ESFVHQADNL
301: RQQTIHQLHR ILTIRQSARC FMMIGEYYGR LRALSSLWAS RPRETMMADD NSCQTTSELQ MIQASQHHFS MR

Best Arabidopsis Sequence Match ( AT1G08320.3 )
(BLAST)

001: MANHRMSEAT NHNHNHHLPY SLIHGLNNNH PSSGFINQDG SSSFDFGELE EAIVLQGVKY RNEEAKPPLL GGGGGATTLE MFPSWPIRTH QTLPTESSKS
101: GGESSDSGSA NFSGKAESQQ PESPMSSKHH LMLQPHHNNM ANSSSTSGLP STSRTLAPPK PSEDKRKATT SGKQLDAKTL RRLAQNREAA RKSRLRKKAY
201: VQQLESSRIK LSQLEQELQR ARSQGLFMGG CGPPGPNITS GAAIFDMEYG RWLEDDNRHM SEIRTGLQAH LSDNDLRLIV DGYIAHFDEI FRLKAVAAKA
301: DVFHLIIGTW MSPAERCFIW MAGFRPSDLI KILVSQMDLL TEQQLMGIYS LQHSSQQAEE ALSQGLEQLQ QSLIDTLAAS PVIDGMQQMA VALGKISNLE
401: GFIRQADNLR QQTVHQLRRI LTVRQAARCF LVIGEYYGRL RALSSLWLSR PRETLMSDET SCQTTTDLQI VQSSRNHFSN F

Arabidopsis Description

TGA9Transcription factor TGA9 [Source:UniProtKB/Swiss-Prot;Acc:Q93XM6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.