Factsheet for TraesCS3B01G404800.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G372400.2	Wheat	nucleus	97.38	97.38
TraesCS3D01G365200.3	Wheat	nucleus	98.25	97.07
Os01t0859500-01	Rice	nucleus	77.49	82.37
KXG33735	Sorghum	nucleus	73.82	79.36
Zm00001d012294_P009	Maize	nucleus	71.55	73.87
HORVU3Hr1G084340.10	Barley	nucleus	71.55	72.06
TraesCS1B01G285800.1	Wheat	nucleus	61.08	66.54
Zm00001d042777_P006	Maize	nucleus	74.69	65.85
GSMUA_Achr11P...	Banana	cytosol	27.23	64.46
Solyc11g068370.1.1	Tomato	nucleus	38.39	59.14
PGSC0003DMT400067782	Potato	nucleus	33.68	58.66
GSMUA_Achr11P...	Banana	nucleus	47.29	55.08
TraesCS3B01G220400.2	Wheat	nucleus	31.76	54.82
Bra031622.1-P	Field mustard	nucleus	40.31	53.97
CDY22689	Canola	nucleus	40.14	53.74
GSMUA_Achr5P26200_001	Banana	nucleus	38.05	53.69
VIT_06s0080g00360.t01	Wine grape	nucleus	46.77	53.6
Bra018634.1-P	Field mustard	nucleus	43.8	52.84
TraesCS2B01G113200.2	Wheat	nucleus	30.89	52.68
CDX95068	Canola	nucleus	43.8	52.51
PGSC0003DMT400018306	Potato	nucleus	44.68	52.46
CDX93571	Canola	nucleus	43.63	52.3
Solyc06g074320.2.1	Tomato	nucleus	45.72	52.3
GSMUA_Achr10P...	Banana	nucleus	42.93	52.12
TraesCS4B01G178600.1	Wheat	nucleus	30.37	52.1
AT1G08320.4	Thale cress	nucleus	43.46	51.77
CDY06309	Canola	nucleus	43.63	51.65
KRH26635	Soybean	nucleus	43.98	51.64
KRH22685	Soybean	nucleus	43.98	51.43
KRH30432	Soybean	nucleus	43.8	50.91
KRH25227	Soybean	nucleus	44.5	50.9
GSMUA_Achr3P22700_001	Banana	nucleus	44.5	50.4
TraesCS4B01G135000.1	Wheat	nucleus	43.8	44.35
TraesCS1B01G127400.1	Wheat	nucleus	25.83	43.53
TraesCS3B01G365100.1	Wheat	nucleus	34.55	41.51
TraesCS7B01G114300.1	Wheat	nucleus	30.54	39.06
TraesCS6B01G193200.2	Wheat	nucleus	30.02	37.55
GSMUA_Achr11P...	Banana	nucleus	19.2	35.6
TraesCS2B01G556600.1	Wheat	nucleus	26.7	35.17
TraesCS5B01G265300.1	Wheat	nucleus	30.72	33.46

Protein Annotations

MapMan:15.5.4.1	MapMan:15.5.4.7.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	GO:GO:0045893	InterPro:IPR004827
InterPro:IPR025422	PFAM:PF00170	PFAM:PF14144	ScanProsite:PS00036	PFscan:PS50217	PFscan:PS51806
PANTHER:PTHR22952	PANTHER:PTHR22952:SF215	SMART:SM00338	SUPFAM:SSF57959	InterPro:TGA_domain	EnsemblPlantsGene:TraesCS3B01G404800
EnsemblPlants:TraesCS3B01G404800.2	InterPro:bZIP	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3B:-:640061088..640068234

Molecular Weight (calculated)

62068.2 Da

IEP (calculated)

6.949

GRAVY (calculated)

-0.497

Length

573 amino acids

Sequence
(BLAST)

001: MVQGEEASCS WRMASAAHDH HERAVLHLNH QAALAYHGGL QLQPHHHAAA APPAASFLDF QPAAAAAAYF GELEEALIHG ANAGVSVADH LHHPHPGGMI
101: AGDAQAKCKL PAAAGGGGGY LAGAGRPPTL EIFPSWPMPH PQQLHSAGNS QSVGSTTDSS SARNTMAQME LVSPGPAGSV RPSPSSTTSE QQRQEVMMVT
201: TDDYSHKPGL PPPAAAGLAA AAPSFQQPQH QHQQLQLHGG GDHDKRKHGS TRKDGKLVDS KTERRLAQNR EAAKKSRLRK KAYVQNLETS RVRLQQMEQE
301: LQRARSQGIF LGGGGAGGDM SPGAAMFDME YARWLDDDGK RLAELRGGLQ AHLADSNLGA AVEECMQHYD ELFQLKAELA HADVFHLLTG AWATPAERCF
401: FWMGGFRPSE LLKILIGQLD PLTEQQMMGI CGLQHSSEQA EEALAQGLQQ LHQSLADTVA AGTLNDGTPG PNYMAIMAIA LEKLASLESF YQQADNLRQQ
501: TLHQMRRILT TRQAARCFLS IGEYYRRLRA LSSLWASRPR ENFIGTESLS PTGTELQGMQ QHHQPQQNQF SGF

Best Arabidopsis Sequence Match ( AT1G08320.1 )
(BLAST)

001: MANHRMSEAT NHNHNHHLPY SLIHGLNNNH PSSGFINQDG SSSFDFGELE EAIVLQGVKY RNEEAKPPLL GGGGGATTLE MFPSWPIRTH QTLPTESSKS
101: GGESSDSGSA NFSGKAESQQ PESPMSSKHH LMLQPHHNNM ANSSSTSGLP STSRTLAPPK PSEDKRKATT SGKQLDAKTL RRLAQNREAA RKSRLRKKAY
201: VQQLESSRIK LSQLEQELQR ARSQGLFMGG CGPPGPNITS GAAIFDMEYG RWLEDDNRHM SEIRTGLQAH LSDNDLRLIV DGYIAHFDEI FRLKAVAAKA
301: DVFHLIIGTW MSPAERCFIW MAGFRPSDLI KILVSQMDLL TEQQLMGIYS LQHSSQQAEE ALSQGLEQLQ QSLIDTLAAS PVIDGMQQMA VALGKISNLE
401: GFIRQADNLR QQTVHQLRRI LTVRQAARCF LVIGEYYGRL RALSSLWLSR PRETLMSDET SCQTTTDLQI VQSSRNHFSN F

Arabidopsis Description

TGA9Transcription factor TGA9 [Source:UniProtKB/Swiss-Prot;Acc:Q93XM6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.