Factsheet for TraesCS6B01G193200.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G154400.1	Wheat	nucleus	97.6	95.92
TraesCS6A01G165800.1	Wheat	nucleus	97.38	95.71
HORVU0Hr1G015710.1	Barley	nucleus	95.41	95.0
KXG29702	Sorghum	nucleus	65.94	61.89
Zm00001d015845_P001	Maize	cytosol	35.37	60.22
Os02t0194900-00	Rice	nucleus	45.41	55.76
Zm00001d015846_P001	Maize	nucleus	23.36	52.97
TraesCS4B01G178600.1	Wheat	nucleus	31.88	43.71
TraesCS2B01G113200.2	Wheat	nucleus	31.66	43.15
TraesCS3B01G220400.2	Wheat	nucleus	31.22	43.07
TraesCS1B01G127400.1	Wheat	nucleus	29.04	39.12
TraesCS5B01G265300.1	Wheat	nucleus	43.45	37.83
TraesCS3B01G365100.1	Wheat	nucleus	34.93	33.54
TraesCS7B01G114300.1	Wheat	nucleus	31.88	32.59
TraesCS2B01G556600.1	Wheat	nucleus	29.69	31.26
TraesCS1B01G285800.1	Wheat	nucleus	35.59	30.99
TraesCS4B01G135000.1	Wheat	nucleus	37.34	30.21
TraesCS3B01G404800.2	Wheat	nucleus	37.55	30.02

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	MapMan:15.5.4.7.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR004827	InterPro:IPR025422
PFAM:PF00170	PFAM:PF14144	ScanProsite:PS00036	PFscan:PS50217	PFscan:PS51806	PANTHER:PTHR22952
PANTHER:PTHR22952:SF370	SMART:SM00338	SUPFAM:SSF57959	InterPro:TGA_domain	EnsemblPlantsGene:TraesCS6B01G193200	EnsemblPlants:TraesCS6B01G193200.2
InterPro:bZIP	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr6B:-:227642310..227651301

Molecular Weight (calculated)

50066.2 Da

IEP (calculated)

7.774

GRAVY (calculated)

-0.464

Length

458 amino acids

Sequence
(BLAST)

001: MGDRPWQQPH EQASCSAHAE MIQASTAATS SIHGSIIRKD PGGYEDLAEL DQALFLYINS QDQQSVQEQP QTLNIFPSRP MHVVAEPSPK AATSTSNIIA
101: ASSNLKPQRP PSKQSAMTAP GGKAAVKREG SGSGGAGTPS TSEHEGPRTP DAKTLRRLAQ NREAARKSRL RKKAYIQNLE TSRVRLSHME QEMQRCSAQG
201: AILGGGAGIG GLSPEAAWFD GEYARWVDEH DRMMRHLRAA VDAEGVEHDA AATDGEQLLR QLIDAAAAHH VVLAELKSAV ARADVFHLVS GMWLPAAERC
301: FIWIGGSRPS DLIKVMARHM EPLTEQQAAG MYDVQRWARE REEALDRELQ ATYRSLSDTV SSDALISPYP DTAAYMAHMS LAISNLSSLE AFVRQADALR
401: LQTLHRLPQV LTARQAARCF LAVADYSQRL RALSSLWLAR PRQDQPNPPG AGARVFHP

Best Arabidopsis Sequence Match ( AT1G08320.3 )
(BLAST)

001: MANHRMSEAT NHNHNHHLPY SLIHGLNNNH PSSGFINQDG SSSFDFGELE EAIVLQGVKY RNEEAKPPLL GGGGGATTLE MFPSWPIRTH QTLPTESSKS
101: GGESSDSGSA NFSGKAESQQ PESPMSSKHH LMLQPHHNNM ANSSSTSGLP STSRTLAPPK PSEDKRKATT SGKQLDAKTL RRLAQNREAA RKSRLRKKAY
201: VQQLESSRIK LSQLEQELQR ARSQGLFMGG CGPPGPNITS GAAIFDMEYG RWLEDDNRHM SEIRTGLQAH LSDNDLRLIV DGYIAHFDEI FRLKAVAAKA
301: DVFHLIIGTW MSPAERCFIW MAGFRPSDLI KILVSQMDLL TEQQLMGIYS LQHSSQQAEE ALSQGLEQLQ QSLIDTLAAS PVIDGMQQMA VALGKISNLE
401: GFIRQADNLR QQTVHQLRRI LTVRQAARCF LVIGEYYGRL RALSSLWLSR PRETLMSDET SCQTTTDLQI VQSSRNHFSN F

Arabidopsis Description

TGA9Transcription factor TGA9 [Source:UniProtKB/Swiss-Prot;Acc:Q93XM6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.