Factsheet for HORVU3Hr1G084340.10

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G404800.2	Wheat	nucleus	72.06	71.55
TraesCS3A01G372400.2	Wheat	nucleus	71.35	70.86
TraesCS3D01G365200.3	Wheat	nucleus	71.7	70.34
Os01t0859500-01	Rice	nucleus	59.05	62.34
KXG33735	Sorghum	nucleus	55.18	58.91
Zm00001d012294_P009	Maize	nucleus	53.78	55.14
HORVU1Hr1G073870.2	Barley	nucleus	47.8	52.01
Zm00001d042777_P006	Maize	nucleus	56.41	49.38
Solyc11g068370.1.1	Tomato	nucleus	26.54	40.59
HORVU3Hr1G042830.1	Barley	cytosol, mitochondrion, nucleus, plastid	10.19	38.93
GSMUA_Achr11P...	Banana	nucleus	33.57	38.82
KRH25227	Soybean	nucleus	33.74	38.32
KRH26635	Soybean	nucleus	32.51	37.91
VIT_06s0080g00360.t01	Wine grape	nucleus	33.22	37.8
Bra018634.1-P	Field mustard	nucleus	31.46	37.68
KRH30432	Soybean	nucleus	32.51	37.53
CDX95068	Canola	nucleus	31.46	37.45
KRH22685	Soybean	nucleus	32.16	37.35
Solyc06g074320.2.1	Tomato	nucleus	32.86	37.33
PGSC0003DMT400018306	Potato	nucleus	31.99	37.3
CDX93571	Canola	nucleus	31.28	37.24
HORVU4Hr1G025130.10	Barley	nucleus	23.73	37.19
Bra031622.1-P	Field mustard	nucleus	27.94	37.15
PGSC0003DMT400067782	Potato	nucleus	21.44	37.08
CDY22689	Canola	nucleus	27.77	36.92
AT1G08320.4	Thale cress	nucleus	30.93	36.59
CDY06309	Canola	nucleus	30.93	36.36
GSMUA_Achr10P...	Banana	nucleus	30.05	36.23
GSMUA_Achr5P26200_001	Banana	nucleus	25.48	35.71
GSMUA_Achr11P...	Banana	nucleus	18.98	34.95
HORVU3Hr1G042790.4	Barley	nucleus	20.04	34.44
GSMUA_Achr3P22700_001	Banana	nucleus	30.58	34.39
HORVU2Hr1G116130.4	Barley	nucleus	7.91	33.83
HORVU2Hr1G016580.5	Barley	nucleus	19.16	32.34
GSMUA_Achr11P...	Banana	cytosol	13.53	31.82
HORVU4Hr1G052330.3	Barley	nucleus	18.63	31.74
HORVU7Hr1G042180.5	Barley	nucleus	19.68	29.71
HORVU0Hr1G015710.1	Barley	nucleus	23.02	28.48
HORVU3Hr1G079010.5	Barley	nucleus	22.85	27.25
HORVU1Hr1G068220.1	Barley	nucleus	16.17	26.82
HORVU0Hr1G032230.4	Barley	nucleus	15.11	24.5
HORVU5Hr1G053330.5	Barley	nucleus	20.39	23.02
HORVU5Hr1G073410.1	Barley	nucleus	22.14	22.22
HORVU2Hr1G116090.2	Barley	cytosol	10.9	14.66

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	UniProt:A0A287M0H1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	EnsemblPlantsGene:HORVU3Hr1G084340
EnsemblPlants:HORVU3Hr1G084340.10	InterPro:IPR004827	InterPro:IPR025422	PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217
PFscan:PS51806	PANTHER:PTHR22952	PANTHER:PTHR22952:SF215	SMART:SM00338	SUPFAM:SSF57959	InterPro:TGA_domain
UniParc:UPI000B46560F	InterPro:bZIP	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:607096714..607103891

Molecular Weight (calculated)

60264.1 Da

IEP (calculated)

11.573

GRAVY (calculated)

-0.656

Length

569 amino acids

Sequence
(BLAST)

001: VQGEEASCSW RMASAHDHAV HLSHQAALAY HGGLQLQPHH HAASAAPSAS FLDFQPAAAA AYFGELEEAL IHGANAGVAD HLHHNPGGMI AGDAHAKSAA
101: AAAGGGGGYL QAGAGAGRPP TLEIFPSWPM PHPQQLHSGG NSQSVGSTTD SSSARNTMAQ MELVSPAGPA GSVRPSPSST TSEQQQQQQR QEVMMVTTDD
201: YSYKPGLPPP AAAGLAAAAP SFQPHHQHQL QLHGGGDHDK RKHGSTRKDG KLVDSKTERR LAQNREAAKK SRLRKKAYVQ NLETSRVRLQ QMEQELQRAR
301: SQGIFLGGCG AGGDMSPGGR HVRHGVRAVA GRRRQAAGGA PGRPAGAPGR QQPGRRGGGV HAALRRAVPA QGGAGALRRL PPPHRRLGHP RRALLLLDGR
401: LPAIRAPQDP DRAAGSADGA ADDGDLRPAA LVGAGGGGAR AGAAAAAPVA RRHRRRRHAQ RRPPPAPTTM GIMAMALEKL ASLESFYQQA DNLRQQTLHQ
501: MRRILTTRQA ARCFLSIGEY YRRLRALSSL WASRPRDNFI GTESLSPTGT ELQGMQQHHQ PQQNQFSGF

Best Arabidopsis Sequence Match ( AT1G08320.2 )
(BLAST)

001: MSSKHHLMLQ PHHNNMANSS STSGLPSTSR TLAPPKPSED KRKATTSGKQ LDAKTLRRLA QNREAARKSR LRKKAYVQQL ESSRIKLSQL EQELQRARSQ
101: GLFMGGCGPP GPNITSGAAI FDMEYGRWLE DDNRHMSEIR TGLQAHLSDN DLRLIVDGYI AHFDEIFRLK AVAAKADVFH LIIGTWMSPA ERCFIWMAGF
201: RPSDLIKILV SQMDLLTEQQ LMGIYSLQHS SQQAEEALSQ GLEQLQQSLI DTLAASPVID GMQQMAVALG KISNLEGFIR QADNLRQQTV HQLRRILTVR
301: QAARCFLVIG EYYGRLRALS SLWLSRPRET LMSDETSCQT TTDLQIVQSS RNHFSNF

Arabidopsis Description

TGA9Transcription factor TGA9 [Source:UniProtKB/Swiss-Prot;Acc:Q93XM6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.