CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012294_P009	Maize	nucleus	88.56	85.05
Os01t0859500-01	Rice	nucleus	81.24	80.33
Zm00001d042777_P006	Maize	nucleus	94.56	77.54
TraesCS3B01G404800.2	Wheat	nucleus	79.36	73.82
TraesCS3A01G372400.2	Wheat	nucleus	78.99	73.47
TraesCS3D01G365200.3	Wheat	nucleus	79.55	73.1
OQU78097	Sorghum	nucleus	64.35	65.71
GSMUA_Achr11P...	Banana	cytosol	27.77	61.16
Solyc11g068370.1.1	Tomato	nucleus	41.09	58.87
PGSC0003DMT400067782	Potato	nucleus	35.83	58.05
EES02530	Sorghum	nucleus	34.52	55.76
HORVU3Hr1G084340.10	Barley	nucleus	58.91	55.18
GSMUA_Achr11P...	Banana	nucleus	50.84	55.08
GSMUA_Achr10P...	Banana	nucleus	48.03	54.24
Bra031622.1-P	Field mustard	nucleus	42.96	53.5
KXG36997	Sorghum	nucleus	33.4	53.45
KXG39494	Sorghum	nucleus	33.58	53.43
CDY22689	Canola	nucleus	42.78	53.27
GSMUA_Achr5P26200_001	Banana	nucleus	40.34	52.96
VIT_06s0080g00360.t01	Wine grape	nucleus	49.53	52.8
PGSC0003DMT400018306	Potato	nucleus	48.03	52.46
Bra018634.1-P	Field mustard	nucleus	46.53	52.21
Solyc06g074320.2.1	Tomato	nucleus	48.97	52.1
CDX95068	Canola	nucleus	46.53	51.88
AT1G08320.4	Thale cress	nucleus	46.72	51.77
CDX93571	Canola	nucleus	46.34	51.67
KRH26635	Soybean	nucleus	46.9	51.23
KRH22685	Soybean	nucleus	46.9	51.02
CDY06309	Canola	nucleus	46.15	50.83
OQU82891	Sorghum	nucleus	46.15	50.41
KRH30432	Soybean	nucleus	46.34	50.1
KXG22976	Sorghum	nucleus	45.22	49.9
GSMUA_Achr3P22700_001	Banana	nucleus	47.28	49.8
KRH25227	Soybean	nucleus	46.72	49.7
KXG22247	Sorghum	nucleus	30.39	48.8
EES03778	Sorghum	nucleus	36.4	41.45
OQU89155	Sorghum	nucleus	30.96	38.82
KXG27222	Sorghum	nucleus	29.46	38.48
OQU76203	Sorghum	nucleus	33.02	38.1
KXG20382	Sorghum	cytosol	10.88	36.71
OQU76708	Sorghum	nucleus	21.39	36.66
KXG35912	Sorghum	nucleus	34.33	36.6
KXG29702	Sorghum	nucleus	33.21	36.27
KXG38496	Sorghum	nucleus	20.83	35.69
GSMUA_Achr11P...	Banana	nucleus	20.45	35.28
OQU79985	Sorghum	golgi, vacuole	28.33	29.26

Protein Annotations

MapMan:15.5.4.1	MapMan:15.5.4.7.1	UniProt:A0A1B6Q743	ncoils:Coil	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	GO:GO:0045893
InterPro:IPR004827	InterPro:IPR025422	EnsemblPlants:KXG33735	ProteinID:KXG33735	ProteinID:KXG33735.1	PFAM:PF00170
PFAM:PF14144	ScanProsite:PS00036	PFscan:PS50217	PFscan:PS51806	PANTHER:PTHR22952	PANTHER:PTHR22952:SF215
SMART:SM00338	EnsemblPlantsGene:SORBI_3003G363600	SUPFAM:SSF57959	InterPro:TGA_domain	UniParc:UPI00081AC3EB	InterPro:bZIP
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:68107870..68115156

Molecular Weight (calculated)

57917.4 Da

IEP (calculated)

6.731

GRAVY (calculated)

-0.379

Length

533 amino acids

Sequence
(BLAST)

001: MVHGEESSWR MERAALPLNQ AFAYGAQAHA AAAPPTCFLD FQPAAAAAAY FGFGELEEAL IHGGGGAGNA HGVDPGVIIK NDVAQAKSAA AAGYLAGAGR
101: PPTLEIFPSW PMRHQQQLHS GNSQSVGSTT DSSSAQNTMS QMELVSPASS APRQEVMMVT TDDYSYKPGL AAAPAAAAAP PPSFQQHHPL PLQLHGGDGG
201: GGGGDHDKRK HGSTRKDGKL VDAKTERRLA QNREAARKSR LRKKAYVQQL ETSRIRLQQV EHELQRARSQ GLFVGGCSAA GDMSSGAAMF DMEYARWLDD
301: DSKRLAELRA GLQAQLLDGN LGLIVEECMQ HYDELFQLKA ALARSDVFHL LTGAWATAAE RCFFWMGGFR PSELLKILIP QLDPLTEQQL LGICNLQQSS
401: EQAEEALAQG LHQLHQSLAD TVATGTLNDG AATPNYMNIM AVAIDKLACL ENFYQQADNL RQQTLHQMRR ILTTRQAARC FLSIGEYYSR LRALSNLWAS
501: RPRDNFIGTE SLSPTATELQ ALHHQQQNQF TGF

Best Arabidopsis Sequence Match ( AT1G08320.1 )
(BLAST)

001: MANHRMSEAT NHNHNHHLPY SLIHGLNNNH PSSGFINQDG SSSFDFGELE EAIVLQGVKY RNEEAKPPLL GGGGGATTLE MFPSWPIRTH QTLPTESSKS
101: GGESSDSGSA NFSGKAESQQ PESPMSSKHH LMLQPHHNNM ANSSSTSGLP STSRTLAPPK PSEDKRKATT SGKQLDAKTL RRLAQNREAA RKSRLRKKAY
201: VQQLESSRIK LSQLEQELQR ARSQGLFMGG CGPPGPNITS GAAIFDMEYG RWLEDDNRHM SEIRTGLQAH LSDNDLRLIV DGYIAHFDEI FRLKAVAAKA
301: DVFHLIIGTW MSPAERCFIW MAGFRPSDLI KILVSQMDLL TEQQLMGIYS LQHSSQQAEE ALSQGLEQLQ QSLIDTLAAS PVIDGMQQMA VALGKISNLE
401: GFIRQADNLR QQTVHQLRRI LTVRQAARCF LVIGEYYGRL RALSSLWLSR PRETLMSDET SCQTTTDLQI VQSSRNHFSN F

Arabidopsis Description

TGA9Transcription factor TGA9 [Source:UniProtKB/Swiss-Prot;Acc:Q93XM6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.