Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d024160_P003 | Maize | nucleus | 79.42 | 58.25 |
| OQU79985 | Sorghum | golgi, vacuole | 94.21 | 56.78 |
| VIT_07s0031g01320.t01 | Wine grape | nucleus | 49.84 | 44.41 |
| GSMUA_Achr5P16630_001 | Banana | nucleus | 50.16 | 42.74 |
| KRH63045 | Soybean | cytosol | 12.22 | 40.43 |
| AT5G65210.2 | Thale cress | nucleus | 47.27 | 39.95 |
| Bra024366.1-P | Field mustard | nucleus | 46.95 | 39.78 |
| CDY08810 | Canola | nucleus | 46.95 | 39.78 |
| CDY14552 | Canola | nucleus | 46.3 | 39.24 |
| KRG97639 | Soybean | nucleus | 45.66 | 39.23 |
| KRH31239 | Soybean | nucleus | 45.66 | 39.01 |
| Bra028604.1-P | Field mustard | nucleus | 45.02 | 38.67 |
| CDX85782 | Canola | nucleus | 45.02 | 38.67 |
| Bra031871.1-P | Field mustard | nucleus | 45.98 | 38.65 |
| CDY37811 | Canola | nucleus | 45.98 | 38.65 |
| CDY33975 | Canola | nucleus | 45.98 | 38.65 |
| AT5G10030.3 | Thale cress | nucleus | 44.69 | 38.19 |
| CDY40074 | Canola | nucleus | 44.37 | 38.12 |
| VIT_18s0001g04470.t01 | Wine grape | nucleus | 44.05 | 37.74 |
| Solyc04g072460.2.1 | Tomato | nucleus | 43.73 | 37.67 |
| PGSC0003DMT400070884 | Potato | nucleus | 43.41 | 37.4 |
| Solyc12g056860.1.1 | Tomato | nucleus | 41.8 | 37.36 |
| PGSC0003DMT400033308 | Potato | nucleus | 42.44 | 37.08 |
| KRH53141 | Soybean | nucleus | 42.12 | 36.9 |
| Bra015646.1-P | Field mustard | nucleus | 40.19 | 36.87 |
| CDX69866 | Canola | nucleus | 43.09 | 36.81 |
| Bra009063.1-P | Field mustard | nucleus | 43.09 | 36.81 |
| Os08t0176900-01 | Rice | nucleus | 45.66 | 36.5 |
| CDY18683 | Canola | cytosol | 43.41 | 36.29 |
| CDX81273 | Canola | nucleus | 45.34 | 36.25 |
| Solyc04g054320.2.1 | Tomato | nucleus | 43.09 | 36.22 |
| KRH59415 | Soybean | nucleus | 43.09 | 36.22 |
| KXG36997 | Sorghum | nucleus | 38.59 | 36.04 |
| CDY21625 | Canola | nucleus | 42.12 | 35.99 |
| PGSC0003DMT400043651 | Potato | nucleus | 41.48 | 35.73 |
| Bra037809.1-P | Field mustard | nucleus | 45.02 | 35.71 |
| KXG27222 | Sorghum | nucleus | 46.62 | 35.54 |
| KXG39494 | Sorghum | nucleus | 38.26 | 35.52 |
| KRH64780 | Soybean | nucleus | 41.16 | 35.36 |
| KRH43266 | Soybean | nucleus | 43.09 | 35.36 |
| CDX68037 | Canola | nucleus | 42.12 | 35.31 |
| EES02530 | Sorghum | nucleus | 37.3 | 35.15 |
| Solyc04g011670.2.1 | Tomato | nucleus | 42.12 | 35.03 |
| KRH16629 | Soybean | nucleus | 41.48 | 34.86 |
| AT1G77920.1 | Thale cress | nucleus | 41.16 | 34.78 |
| KRH18838 | Soybean | nucleus | 41.16 | 34.59 |
| Bra031364.1-P | Field mustard | nucleus | 41.48 | 34.13 |
| KXG22247 | Sorghum | nucleus | 36.33 | 34.04 |
| Bra016389.1-P | Field mustard | nucleus | 40.19 | 33.97 |
| CDY41495 | Canola | nucleus | 40.19 | 33.88 |
| CDY38843 | Canola | nucleus | 40.19 | 33.78 |
| AT1G22070.1 | Thale cress | nucleus | 41.48 | 33.59 |
| CDY38253 | Canola | nucleus | 41.48 | 33.51 |
| Bra037374.1-P | Field mustard | nucleus | 33.76 | 33.44 |
| PGSC0003DMT400016235 | Potato | nucleus | 39.87 | 31.63 |
| CDY21336 | Canola | nucleus | 41.48 | 30.86 |
| OQU76708 | Sorghum | nucleus | 29.9 | 29.9 |
| CDX88399 | Canola | nucleus | 40.84 | 29.53 |
| CDX87494 | Canola | nucleus | 41.16 | 28.83 |
| EES03778 | Sorghum | nucleus | 40.51 | 26.92 |
| OQU89155 | Sorghum | nucleus | 36.01 | 26.35 |
| OQU76203 | Sorghum | nucleus | 38.26 | 25.76 |
| KXG22976 | Sorghum | nucleus | 37.3 | 24.02 |
| KXG29702 | Sorghum | nucleus | 37.62 | 23.98 |
| KRG92164 | Soybean | nucleus | 18.01 | 23.83 |
| KXG35912 | Sorghum | nucleus | 37.62 | 23.4 |
| OQU82891 | Sorghum | nucleus | 36.66 | 23.36 |
| CDX79240 | Canola | nucleus | 38.26 | 20.88 |
| KXG33735 | Sorghum | nucleus | 35.69 | 20.83 |
| KRH34622 | Soybean | cytosol | 15.43 | 20.78 |
| OQU78097 | Sorghum | nucleus | 34.41 | 20.5 |
| KXG20382 | Sorghum | cytosol | 8.36 | 16.46 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | MapMan:15.5.4.7.1 | UniProt:A0A1B6QKQ0 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| InterPro:IPR004827 | InterPro:IPR025422 | EnsemblPlants:KXG38496 | ProteinID:KXG38496 | ProteinID:KXG38496.1 | PFAM:PF00170 |
| PFAM:PF14144 | ScanProsite:PS00036 | PFscan:PS50217 | PFscan:PS51806 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF160 |
| SMART:SM00338 | EnsemblPlantsGene:SORBI_3001G243800 | SUPFAM:SSF57959 | InterPro:TGA_domain | UniParc:UPI00081AEACD | InterPro:bZIP |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:25331187..25332625
Molecular Weight (calculated)
34463.2 Da
IEP (calculated)
9.265
GRAVY (calculated)
-0.341
Length
311 amino acids
Sequence
(BLAST)
(BLAST)
001: MGIYERQRHL VAAGVSVWGE PFRPDADALP LSAVVPTVTL VTTPAPPLDV VEAEEVKFGK HQLLQAQQYD VPPQVEEEAA PAPPPPSSDS FGHDHDHDAA
101: RPRDKIQRRL AQNREAARKS RLRKKAYIQN LETSRMKLAQ LEQELTMARR QQQHGAYGVG EGGVAAATAA VDPRVAAFEL DYTRWVEEQG RQATELRAAL
201: QSHAPEVQLR VLVDAGLAHY GALFQAKAQA AQSDAFFVLS GVWRAPAERF FLWIGGFRPF ELLKVLAPRL DPLMDHQAAE VRKLILTRRQ AARGLLALAD
301: YGQRLRALSS L
101: RPRDKIQRRL AQNREAARKS RLRKKAYIQN LETSRMKLAQ LEQELTMARR QQQHGAYGVG EGGVAAATAA VDPRVAAFEL DYTRWVEEQG RQATELRAAL
201: QSHAPEVQLR VLVDAGLAHY GALFQAKAQA AQSDAFFVLS GVWRAPAERF FLWIGGFRPF ELLKVLAPRL DPLMDHQAAE VRKLILTRRQ AARGLLALAD
301: YGQRLRALSS L
001: MMSSSSPTQL ASLRDMGIYE PFQQIVGWGN VFKSDINDHS PNTATSSIIQ VDPRIDDHNN NIKINYDSSH NQIEAEQPSS NDNQDDDGRI HDKMKRRLAQ
101: NREAARKSRL RKKAYVQQLE ESRLKLSQLE QELEKVKQQG HLGPSGSINT GIASFEMEYS HWLQEQSRRV SELRTALQSH ISDIELKMLV ESCLNHYANL
201: FQMKSDAAKA DVFYLISGMW RTSTERFFQW IGGFRPSELL NVVMPYLQPL TDQQILEVRN LQQSSQQAED ALSQGIDKLQ QSLAESIVID AVIESTHYPT
301: HMAAAIENLQ ALEGFVNQAD HLRQQTLQQM AKILTTRQSA RGLLALGEYL HRLRALSSLW AARPQEPT
101: NREAARKSRL RKKAYVQQLE ESRLKLSQLE QELEKVKQQG HLGPSGSINT GIASFEMEYS HWLQEQSRRV SELRTALQSH ISDIELKMLV ESCLNHYANL
201: FQMKSDAAKA DVFYLISGMW RTSTERFFQW IGGFRPSELL NVVMPYLQPL TDQQILEVRN LQQSSQQAED ALSQGIDKLQ QSLAESIVID AVIESTHYPT
301: HMAAAIENLQ ALEGFVNQAD HLRQQTLQQM AKILTTRQSA RGLLALGEYL HRLRALSSLW AARPQEPT
Arabidopsis Description
TGA7Transcription factor TGA7 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZE2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.