CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EER92695
EES02530
EES03778
EES05529
KXG22247
KXG27222
KXG36997
KXG38496
KXG39494
OQU79985
OQU81583

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G64280.1	KXG27222	AT1G22070.1	10659709
AT1G64280.1	KXG38496	AT1G22070.1	10659709
AT1G64280.1	OQU79985	AT1G22070.1	10659709
AT1G64280.1	KXG27222	AT1G22070.1	10662863
AT1G64280.1	KXG38496	AT1G22070.1	10662863
AT1G64280.1	OQU79985	AT1G22070.1	10662863
AT1G64280.1	KXG27222	AT1G22070.1	15634206
AT1G64280.1	KXG38496	AT1G22070.1	15634206
AT1G64280.1	OQU79985	AT1G22070.1	15634206
AT1G64280.1	EES05529	AT1G26830.1	19490895
AT1G64280.1	KXG27222	AT1G77920.1	10662863
AT1G64280.1	KXG38496	AT1G77920.1	10662863
AT1G64280.1	OQU79985	AT1G77920.1	10662863
AT1G64280.1	KXG27222	AT1G77920.1	15634206
AT1G64280.1	KXG38496	AT1G77920.1	15634206
AT1G64280.1	OQU79985	AT1G77920.1	15634206
AT1G64280.1	OQU81583	AT4G14110.1	19490895
AT1G64280.1	EES02530	AT5G06960.1	10659709
AT1G64280.1	EES03778	AT5G06960.1	10659709
AT1G64280.1	KXG22247	AT5G06960.1	10659709
AT1G64280.1	KXG36997	AT5G06960.1	10659709
AT1G64280.1	KXG39494	AT5G06960.1	10659709
AT1G64280.1	EES02530	AT5G06960.1	10662863
AT1G64280.1	EES03778	AT5G06960.1	10662863
AT1G64280.1	KXG22247	AT5G06960.1	10662863
AT1G64280.1	KXG36997	AT5G06960.1	10662863
AT1G64280.1	KXG39494	AT5G06960.1	10662863
AT1G64280.1	EES02530	AT5G06960.1	12383081
AT1G64280.1	EES03778	AT5G06960.1	12383081
AT1G64280.1	KXG22247	AT5G06960.1	12383081
AT1G64280.1	KXG36997	AT5G06960.1	12383081
AT1G64280.1	KXG39494	AT5G06960.1	12383081
AT1G64280.1	EES02530	AT5G06960.1	15634206
AT1G64280.1	EES03778	AT5G06960.1	15634206
AT1G64280.1	KXG22247	AT5G06960.1	15634206
AT1G64280.1	KXG36997	AT5G06960.1	15634206
AT1G64280.1	KXG39494	AT5G06960.1	15634206
AT1G64280.1	EER92695	AT5G42970.1	19490895

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d039469_P001	Maize	cytosol	92.11	92.11
Os01t0194300-01	Rice	cytosol	82.5	82.65
TraesCS3B01G123800.1	Wheat	cytosol	77.87	78.68
TraesCS3A01G105400.1	Wheat	cytosol	76.67	77.47
TraesCS3D01G107500.1	Wheat	cytosol	77.02	77.41
HORVU3Hr1G019230.6	Barley	cytosol	77.19	75.25
TraesCS7D01G019000.1	Wheat	cytosol, mitochondrion	62.09	74.33
TraesCS4A01G470500.1	Wheat	cytosol	61.41	73.21
GSMUA_Achr2P16670_001	Banana	cytosol	67.75	67.64
GSMUA_Achr7P09190_001	Banana	cytosol	63.64	64.52
TraesCS7A01G021800.1	Wheat	cytosol, plastid	61.06	63.69
GSMUA_Achr6P00950_001	Banana	nucleus	64.67	59.84
VIT_11s0016g01990.t01	Wine grape	cytosol	59.52	59.42
Solyc07g040690.2.1	Tomato	cytosol	57.29	57.99
KRH37416	Soybean	cytosol	54.37	54.47
Bra027690.1-P	Field mustard	cytosol, plastid	46.31	47.37
CDY34413	Canola	cytosol	45.97	47.1
CDY25575	Canola	cytosol	45.97	47.02
AT1G64280.1	Thale cress	cytosol	45.11	44.35
CDY50004	Canola	cytosol	43.74	42.79
Bra013950.1-P	Field mustard	cytosol	42.2	42.49
AT4G26120.2	Thale cress	cytosol, plastid	43.05	41.76
CDX94371	Canola	cytosol	43.05	41.49
Bra013952.1-P	Field mustard	cytosol	43.05	41.49
CDX89362	Canola	cytosol	42.54	40.99
CDX89364	Canola	cytosol	42.2	40.46
CDX94376	Canola	cytosol	42.02	40.43
EES01524	Sorghum	plastid	41.51	38.97
EER91108	Sorghum	plastid	39.28	38.29
TraesCS7A01G022800.1	Wheat	cytosol	68.44	26.65
Bra010439.1-P	Field mustard	cytosol	42.88	25.99
CDY14314	Canola	nucleus	37.05	25.65
EES16520	Sorghum	cytosol	20.58	25.0
OQU88196	Sorghum	cytosol	21.27	24.46
EES09234	Sorghum	cytosol	20.24	24.38

Protein Annotations

Gene3D:1.25.40.20	MapMan:11.8.2.2	MapMan:26.8.3.1.1	Gene3D:3.30.710.10	EntrezGene:8084346	InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	InterPro:BTB/POZ_dom	UniProt:C5XLW7	EnsemblPlants:EES00131	ProteinID:EES00131
ProteinID:EES00131.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006950	GO:GO:0008150	GO:GO:0009605
GO:GO:0009607	GO:GO:0042742	GO:GO:0050832	GO:GO:0080027	InterPro:IPR000210	InterPro:IPR002110
InterPro:IPR020683	InterPro:IPR036770	InterPro:NPR1/NIM1-like_C	InterPro:NPR_central_dom	PFAM:PF00651	PFAM:PF11900
PFAM:PF12313	PFAM:PF13637	PFscan:PS50088	PFscan:PS50097	PFscan:PS50297	PANTHER:PTHR24413
PANTHER:PTHR24413:SF124	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SMART:SM00248	EnsemblPlantsGene:SORBI_3003G032000	SUPFAM:SSF48403
SUPFAM:SSF54695	unigene:Sbi.7360	UniParc:UPI0001A8442E	RefSeq:XP_002455011.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr3:+:2964827..2969715

Molecular Weight (calculated)

64464.2 Da

IEP (calculated)

5.813

GRAVY (calculated)

-0.225

Length

583 amino acids

Sequence
(BLAST)

001: MEPMESQLTA VALSDSDSAS VEGAAAADAA DADLQALRRL SDNLAAAFRS PDDYGFLSDA RIAVPGAPDL RVHRCVLCAR SPFLRDVFAR RAASDGEEKD
101: KGRDRGKVEL RDLLGDEVEV GYEALRLVVD YLYSGRVAAL PKAACLCVDE DGCAHVGCRP AVAFMAQVLF AASTFDVAEL TNLFQRRLLD VLDKVEVDNL
201: PLILSVANLC NKSCVKLLER CLDVVVRSNL DMITLEKALP PDVVKAIVDA RLSLGLVLPE DKGFPNIHVR RVHRALDSDD VELVRMLLKE GKTNLDDAYA
301: LHYAVEHCDS KITTELLDFA LADVNHRNPR GYTVLHIAAM RREPKIIVSL LTKGARPSDL TFDHRKAVQI SKRLTNHGDY FGPTEDGKPS PKDRLCIEIL
401: EQAERRDPHL GEASVSLAIE GDSARGRLLY LENRVALARI LFPMEARVAM DIAQVDGTLE FTLGSNANLP TEIQRTVDLN DTPFIMKEEH LARMRALAKT
501: VELGKRFFPR CSKVLDKIMD DETELASLGR DTSTEKKRRF HDLQDLVHKA FSEDKEENDR SAARSSSSSS TTSIGIGAVR PRR

Best Arabidopsis Sequence Match ( AT1G64280.1 )
(BLAST)

001: MDTTIDGFAD SYEISSTSFV ATDNTDSSIV YLAAEQVLTG PDVSALQLLS NSFESVFDSP DDFYSDAKLV LSDGREVSFH RCVLSARSSF FKSALAAAKK
101: EKDSNNTAAV KLELKEIAKD YEVGFDSVVT VLAYVYSSRV RPPPKGVSEC ADENCCHVAC RPAVDFMLEV LYLAFIFKIP ELITLYQRHL LDVVDKVVIE
201: DTLVILKLAN ICGKACMKLL DRCKEIIVKS NVDMVSLEKS LPEELVKEII DRRKELGLEV PKVKKHVSNV HKALDSDDIE LVKLLLKEDH TNLDDACALH
301: FAVAYCNVKT ATDLLKLDLA DVNHRNPRGY TVLHVAAMRK EPQLILSLLE KGASASEATL EGRTALMIAK QATMAVECNN IPEQCKHSLK GRLCVEILEQ
401: EDKREQIPRD VPPSFAVAAD ELKMTLLDLE NRVALAQRLF PTEAQAAMEI AEMKGTCEFI VTSLEPDRLT GTKRTSPGVK IAPFRILEEH QSRLKALSKT
501: VELGKRFFPR CSAVLDQIMN CEDLTQLACG EDDTAEKRLQ KKQRYMEIQE TLKKAFSEDN LELGNSSLTD STSSTSKSTG GKRSNRKLSH RRR

Arabidopsis Description

NPR1Regulatory protein NPR1 [Source:UniProtKB/Swiss-Prot;Acc:P93002]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.