CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra013950.1-P	Field mustard	cytosol	92.24	96.55
CDX89364	Canola	cytosol	94.72	94.41
CDY50004	Canola	cytosol	68.81	69.97
CDY25575	Canola	cytosol	62.54	66.49
CDY34413	Canola	cytosol	62.05	66.08
CDX94371	Canola	cytosol	54.95	55.04
CDX89362	Canola	cytosol	54.13	54.21
Solyc07g040690.2.1	Tomato	cytosol	49.17	51.74
VIT_11s0016g01990.t01	Wine grape	cytosol	48.51	50.34
GSMUA_Achr7P09190_001	Banana	cytosol	44.88	47.3
GSMUA_Achr2P16670_001	Banana	cytosol	45.38	47.09
KRH37416	Soybean	cytosol	44.06	45.88
Os01t0194300-01	Rice	cytosol	42.24	43.99
TraesCS3A01G105400.1	Wheat	cytosol	41.75	43.85
GSMUA_Achr6P00950_001	Banana	nucleus	44.88	43.17
Zm00001d039469_P001	Maize	cytosol	41.42	43.05
TraesCS3B01G123800.1	Wheat	cytosol	40.76	42.81
TraesCS3D01G107500.1	Wheat	cytosol	40.59	42.41
TraesCS7D01G019000.1	Wheat	cytosol, mitochondrion	33.83	42.09
EES00131	Sorghum	cytosol	40.43	42.02
HORVU3Hr1G019230.6	Barley	cytosol	41.09	41.64
TraesCS4A01G470500.1	Wheat	cytosol	32.84	40.7
GSMUA_Achr8P05490_001	Banana	cytosol	38.94	40.62
GSMUA_AchrUn_...	Banana	cytosol	38.45	40.52
GSMUA_Achr3P25880_001	Banana	cytosol	37.95	40.49
CDY14314	Canola	nucleus	56.11	40.38
TraesCS7A01G021800.1	Wheat	cytosol, plastid	34.82	37.75
CDY26398	Canola	plastid	33.66	36.3
CDX82577	Canola	plastid	31.68	35.42
CDY39410	Canola	plastid	31.85	35.35
CDX78955	Canola	plastid	32.34	33.33
CDX99350	Canola	plastid	32.01	32.99
CDY36698	Canola	cytosol	24.42	29.08
CDX67678	Canola	cytosol, endoplasmic reticulum, plastid	19.31	25.32
CDX72067	Canola	cytosol	18.98	24.84
CDY30971	Canola	cytosol	18.65	24.84
CDY06130	Canola	cytosol	18.65	24.46
CDX76040	Canola	cytosol	11.72	24.4
CDY35774	Canola	cytosol	11.55	24.05
CDY23854	Canola	cytosol	18.15	22.87
CDY06929	Canola	cytosol, endoplasmic reticulum, plastid	18.32	22.79
CDX79940	Canola	cytosol	11.88	22.71
CDY14765	Canola	cytosol, endoplasmic reticulum, plastid	18.15	22.59
CDY33841	Canola	cytosol	3.14	19.19
TraesCS7A01G022800.1	Wheat	cytosol	36.14	14.63

Protein Annotations

Gene3D:1.25.40.20	MapMan:11.8.2.2	MapMan:26.8.3.1.1	Gene3D:3.30.710.10	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	InterPro:BTB/POZ_dom	EnsemblPlants:CDX94376	ProteinID:CDX94376	ProteinID:CDX94376.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00157495001	InterPro:IPR000210	InterPro:IPR002110	InterPro:IPR020683
InterPro:IPR036770	InterPro:NPR1/NIM1-like_C	PFAM:PF00651	PFAM:PF12313	PFAM:PF13637	PFscan:PS50088
PFscan:PS50097	PFscan:PS50297	PANTHER:PTHR24413	PANTHER:PTHR24413:SF124	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225
SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF54695	UniPathway:UPA00143	UniParc:UPI0004EECB68	SEG:seg

Description

BnaC01g18080D

Coordinates

chrLK031881:-:585948..588718

Molecular Weight (calculated)

67332.5 Da

IEP (calculated)

5.852

GRAVY (calculated)

-0.048

Length

606 amino acids

Sequence
(BLAST)

001: METIAGFDDF YEISSTSFLA APAPTDNSGS STVYPTELFT RPEVSAFQLL SNSLESVFDS PEAFYSDAKL VLSDDKEVSF HRCILSARSL FFKAALTAAE
101: KVQKSTPVKL ELKTLAAEYD VGFDSVVAVL AYVYSGRVRP PPKGVSECAD ESCCHVACRP AVDFMVEVLY LAFVFQIQEL VTMYQRHLLD VVDKVIIEDT
201: LVVLKLANIC GKACKKLFDK CREIIVKSNV DVVTLKKSLP EDIAKQVIDI RKELGLEVAE PEKHVSNIHK ALESDDLDLV VMLLKEGHTN LDEAYALHFA
301: VAYCDEKTAR NLLELGFADV NRRNPRGYTV IHVAAMRKEP TLIALLLTKG ANALEMSLDG RTALLIAKQV TKAAECCILE KGKLAAKGGV CVEILKQPDN
401: TREPFPEDVS PSLAVAADQF KIRLIDLENR VQMARCLYPM EAQVAMDFAR MKGTREFVVT TATDLHMEPF KFVEMHQSRL TALSKTVEFG KRFFPRCSKV
501: LDDIVDSEDL TILALVEEDT PEQRQQKRQR FMEIQEIVQM AFSKDKEDLG KSSLSASSSS TSKLTGKKSH IVLFVILHPV IQNLGKNCSR VPPRTANSVP
601: SNPEGL

Best Arabidopsis Sequence Match ( AT1G64280.1 )
(BLAST)

001: MDTTIDGFAD SYEISSTSFV ATDNTDSSIV YLAAEQVLTG PDVSALQLLS NSFESVFDSP DDFYSDAKLV LSDGREVSFH RCVLSARSSF FKSALAAAKK
101: EKDSNNTAAV KLELKEIAKD YEVGFDSVVT VLAYVYSSRV RPPPKGVSEC ADENCCHVAC RPAVDFMLEV LYLAFIFKIP ELITLYQRHL LDVVDKVVIE
201: DTLVILKLAN ICGKACMKLL DRCKEIIVKS NVDMVSLEKS LPEELVKEII DRRKELGLEV PKVKKHVSNV HKALDSDDIE LVKLLLKEDH TNLDDACALH
301: FAVAYCNVKT ATDLLKLDLA DVNHRNPRGY TVLHVAAMRK EPQLILSLLE KGASASEATL EGRTALMIAK QATMAVECNN IPEQCKHSLK GRLCVEILEQ
401: EDKREQIPRD VPPSFAVAAD ELKMTLLDLE NRVALAQRLF PTEAQAAMEI AEMKGTCEFI VTSLEPDRLT GTKRTSPGVK IAPFRILEEH QSRLKALSKT
501: VELGKRFFPR CSAVLDQIMN CEDLTQLACG EDDTAEKRLQ KKQRYMEIQE TLKKAFSEDN LELGNSSLTD STSSTSKSTG GKRSNRKLSH RRR

Arabidopsis Description

NPR1Regulatory protein NPR1 [Source:UniProtKB/Swiss-Prot;Acc:P93002]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.