CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35774	Canola	cytosol	61.54	96.22
CDX76040	Canola	cytosol	61.32	95.88
Bra014645.1-P	Field mustard	cytosol	61.1	95.53
AT3G57130.1	Thale cress	cytosol	87.25	85.01
CDX72067	Canola	cytosol	85.93	84.45
CDY06130	Canola	cytosol	85.71	84.42
CDX67678	Canola	cytosol, endoplasmic reticulum, plastid	82.86	81.6
CDX79940	Canola	cytosol	50.55	72.56
CDY23854	Canola	cytosol	75.16	71.1
CDY14765	Canola	cytosol, endoplasmic reticulum, plastid	76.04	71.05
CDY06929	Canola	cytosol, endoplasmic reticulum, plastid	75.6	70.64
PGSC0003DMT400027591	Potato	cytosol	69.45	68.55
KRH72058	Soybean	cytosol	71.43	68.28
KRH66789	Soybean	cytosol	72.97	68.17
PGSC0003DMT400021076	Potato	cytosol	72.97	67.76
VIT_08s0007g05740.t01	Wine grape	cytosol	72.53	67.35
Solyc10g079460.1.1	Tomato	cytosol	72.75	67.0
Solyc04g040220.2.1	Tomato	cytosol	68.57	66.95
GSMUA_Achr5P16220_001	Banana	cytosol	64.4	66.44
PGSC0003DMT400076710	Potato	cytosol	70.77	66.12
Solyc10g079750.1.1	Tomato	cytosol	70.11	65.37
GSMUA_Achr11P...	Banana	cytosol	61.32	64.58
GSMUA_AchrUn_...	Banana	cytosol	59.34	64.44
GSMUA_Achr5P08160_001	Banana	cytosol	59.56	63.47
GSMUA_Achr3P08710_001	Banana	cytosol	58.46	62.44
GSMUA_Achr8P22070_001	Banana	cytosol	54.95	60.24
Zm00001d011878_P001	Maize	cytosol	64.62	60.0
TraesCS3D01G484100.1	Wheat	cytosol	65.93	58.71
OQU88196	Sorghum	cytosol	65.27	58.58
TraesCS3B01G537400.1	Wheat	cytosol	65.93	58.37
TraesCS3A01G489000.1	Wheat	cytosol	65.71	58.17
HORVU3Hr1G106880.5	Barley	cytosol	65.49	58.09
Zm00001d042111_P001	Maize	cytosol	64.84	58.07
Os01t0948900-01	Rice	cytosol	42.86	57.86
GSMUA_AchrUn_...	Banana	cytosol	54.73	55.58
Zm00001d023246_P001	Maize	cytosol	57.36	54.95
EES16520	Sorghum	cytosol	57.8	54.79
Zm00001d052468_P002	Maize	cytosol	56.48	54.56
EES09234	Sorghum	cytosol	56.92	53.51
Zm00001d004966_P001	Maize	cytosol	55.6	53.49
Os11t0141900-00	Rice	cytosol	57.8	53.24
TraesCS5D01G139600.1	Wheat	cytosol	57.58	53.14
TraesCS5B01G133700.1	Wheat	cytosol	57.58	53.14
TraesCS5A01G134700.2	Wheat	cytosol	57.58	53.14
Os12t0138500-01	Rice	cytosol	36.26	50.77
Solyc05g018160.1.1	Tomato	cytosol	30.33	49.29
CDY33841	Canola	cytosol	10.33	47.47
CDY26398	Canola	plastid	26.59	21.53
CDX82577	Canola	plastid	25.05	21.03
CDY39410	Canola	plastid	25.05	20.88
CDY34413	Canola	cytosol	25.93	20.74
CDX78955	Canola	plastid	26.37	20.41
CDX99350	Canola	plastid	26.15	20.24
CDY25575	Canola	cytosol	25.27	20.18
CDY50004	Canola	cytosol	25.05	19.13
CDX89364	Canola	cytosol	25.05	18.75
CDX94371	Canola	cytosol	24.84	18.68
CDX94376	Canola	cytosol	24.84	18.65
CDX89362	Canola	cytosol	24.18	18.18
CDY36698	Canola	cytosol	16.92	15.13
CDY14314	Canola	nucleus	20.0	10.81

Protein Annotations

Gene3D:1.25.40.20	MapMan:15.5.4.7.2	Gene3D:3.30.710.10	UniProt:A0A078GZP0	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	InterPro:BTB/POZ_dom	EnsemblPlants:CDY30971	ProteinID:CDY30971	ProteinID:CDY30971.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00047000001	InterPro:IPR000210	InterPro:IPR002110	InterPro:IPR020683
InterPro:IPR036770	InterPro:NPR_central_dom	PFAM:PF00651	PFAM:PF11900	PFAM:PF12796	PFscan:PS50088
PFscan:PS50097	PFscan:PS50297	PANTHER:PTHR24413	PANTHER:PTHR24413:SF116	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225
SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF54695	UniPathway:UPA00143	UniParc:UPI0004EDE59D	SEG:seg

Description

BnaC04g24530DBnaC04g24530D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GZP0]

Coordinates

chrLK032265:+:139358..141978

Molecular Weight (calculated)

50475.5 Da

IEP (calculated)

6.369

GRAVY (calculated)

-0.096

Length

455 amino acids

Sequence
(BLAST)

001: MSSSVEESLK TLSLDSLNLL INGQAFSDVT FSVEGRLVHA HRCILAARSL FFRKFFICGY DPSQTGVESA NNLTGSVIRA AEMGGVIPVN SVGYEVFLLL
101: LQFLYSGQVS LVPHKHEPRS NCGDSGCWHT HCTAAVDLSL DILAAAHYFG VEQLALLTQK HLTSMVENAS IEDVMKVLIA SRKHDMHQLW TTCSYLLTKS
201: GLSTEILAKH LPIELVAKVE DLRHKSSMPH QHDLTSALDL DDQKIRRMRR ALDSSDVELV KLMVMGEGLN IDESLALIYA VENCSREVVK ALLEIGATDV
301: NFQVAPTRKT ALHIAAEMVS PDMVAVLLDH HADPNVQTVD GITPLDILRT LTSNFLFKGT IHGLTHIEPN KLRLCLELIQ SAALVISREE GNNNDNNMKE
401: DHTSGSNLDS RLVYLNLGAT SRDLGDEHGH QTEGMSLHHH HDPSTMYHYH HHRHF

Best Arabidopsis Sequence Match ( AT3G57130.1 )
(BLAST)

001: MSNTFEESLK SMSLDYLNLL INGQAFSDVT FSVEGRLVHA HRCILAARSL FFRKFFCESD PSQPGAEPAN QTGSGARAAA VGGVIPVNSV GYEVFLLLLQ
101: FLYSGQVSIV PHKHEPRSNC GDRGCWHTHC TAAVDLSLDI LAAARYFGVE QLALLTQKHL TSMVEKASIE DVMKVLIASR KQDMHQLWTT CSYLIAKSGL
201: PQEILAKHLP IELVAKIEEL RLKSSMPLRS LMPHHHDLTS TLDLEDQKIR RMRRALDSSD VELVKLMVMG EGLNLDESLA LIYAVENCSR EVVKALLELG
301: AADVNYPAGP TGKTALHIAA EMVSPDMVAV LLDHHADPNV QTVDGITPLD ILRTLTSDFL FKGAIPGLTH IEPNKLRLCL ELVQSAALVI SREEGNNNSN
401: DNNTMIYPRM KDEHTSGSSL DSRLVYLNLG ATNRDIGDDN SNQREGMNLH HHHHDPSTMY HHHHHHF

Arabidopsis Description

NPR6Regulatory protein NPR6 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1I7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.