Factsheet for HORVU3Hr1G106880.5

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G109740.2
HORVU2Hr1G109820.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G41370.1	HORVU2Hr1G109740.2	AT3G51180.1	21798944
AT2G41370.1	HORVU2Hr1G109820.1	AT3G51180.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G484100.1	Wheat	cytosol	97.66	98.04
TraesCS3B01G537400.1	Wheat	cytosol	98.05	97.86
TraesCS3A01G489000.1	Wheat	cytosol	97.66	97.47
Zm00001d011878_P001	Maize	cytosol	82.65	86.53
Zm00001d042111_P001	Maize	cytosol	85.19	86.02
OQU88196	Sorghum	cytosol	84.99	86.0
Os01t0948900-01	Rice	cytosol	55.75	84.87
GSMUA_Achr5P16220_001	Banana	cytosol	64.13	74.6
GSMUA_Achr11P...	Banana	cytosol	61.99	73.61
VIT_08s0007g05740.t01	Wine grape	cytosol	68.23	71.43
KRH72058	Soybean	cytosol	65.89	71.01
Solyc04g040220.2.1	Tomato	cytosol	64.33	70.82
PGSC0003DMT400027591	Potato	cytosol	63.55	70.72
CDX79940	Canola	cytosol	43.47	70.35
CDY23854	Canola	cytosol	65.69	70.06
Bra004617.1-P	Field mustard	cytosol	43.27	70.03
KRH66789	Soybean	cytosol	66.47	70.02
PGSC0003DMT400076710	Potato	cytosol	66.28	69.82
AT2G41370.1	Thale cress	cytosol	66.67	69.65
CDY14765	Canola	cytosol, endoplasmic reticulum, plastid	66.08	69.61
CDY06929	Canola	cytosol, endoplasmic reticulum, plastid	65.89	69.4
Solyc10g079750.1.1	Tomato	cytosol	65.69	69.06
PGSC0003DMT400021076	Potato	cytosol	65.89	68.98
Solyc10g079460.1.1	Tomato	cytosol	65.89	68.42
Bra016938.1-P	Field mustard	cytosol	64.91	68.38
AT3G57130.1	Thale cress	cytosol	61.99	68.09
CDX76040	Canola	cytosol	38.6	68.04
Bra014645.1-P	Field mustard	cytosol	38.6	68.04
Bra007306.1-P	Field mustard	cytosol	61.01	67.75
CDX72067	Canola	cytosol	61.01	67.6
CDY06130	Canola	cytosol	60.62	67.32
CDY35774	Canola	cytosol	38.01	67.01
Bra003268.1-P	Field mustard	cytosol, endoplasmic reticulum, plastid	60.23	66.88
CDX67678	Canola	cytosol, endoplasmic reticulum, plastid	59.65	66.23
CDY30971	Canola	cytosol	58.09	65.49
Solyc05g018160.1.1	Tomato	cytosol	29.04	53.21
CDY33841	Canola	cytosol	8.77	45.45
HORVU3Hr1G019230.6	Barley	cytosol	25.15	21.57
HORVU3Hr1G074640.4	Barley	cytosol, plastid	24.37	20.26
HORVU4Hr1G003040.1	Barley	cytosol, plastid	22.42	19.52

Protein Annotations

Gene3D:1.25.40.20	MapMan:15.5.4.7.2	Gene3D:3.30.710.10	UniProt:A0A287MKV2	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:HORVU3Hr1G106880
EnsemblPlants:HORVU3Hr1G106880.5	InterPro:IPR000210	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	InterPro:NPR_central_dom
PFAM:PF00651	PFAM:PF11900	PFAM:PF12796	PFscan:PS50088	PFscan:PS50097	PFscan:PS50297
PANTHER:PTHR24413	PANTHER:PTHR24413:SF116	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SMART:SM00248	SUPFAM:SSF48403
SUPFAM:SSF54695	UniParc:UPI000B46EABE	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr3H:-:671496050..671499282

Molecular Weight (calculated)

54146.0 Da

IEP (calculated)

6.605

GRAVY (calculated)

-0.007

Length

513 amino acids

Sequence
(BLAST)

001: MDDTFKSLSM DYLNLLINGQ AFSDVTFSVE GRLVHAHRCI LAARSLFFRK FFCGAAADQA AAAAAAGSPG AVLMDHLSPR SPSGASASSP RGAGGSGSAS
101: AAAMAPGAVI PVNSVSYEVF LLVLQFLYSG QVSLVPQKGE PRPGCGERGC WHTHCAAAVD LALDTLTVAR SFGVEELALL TQKQLAGMVE KASIEDVMKV
201: LMASRKQDLH QLWNTCSHLV AKSGLPPEVL AKHLPLDVVA KIDDLRLKSS MSRRSPFLAH HQQHQQHHHQ GSVIDASAAE LDDHNKIRRM RRALDSSDVE
301: LVKLMVMGEG LNLDEALALH YAVENCSREV VKALLELGAA DVNHPAGPAG KTPLHVAAEM VCPDMVAVLL DHHADPNVRT VDGVTPLDIL RTLTSDFLFK
401: GAVPGLTHIE PNKLRLCLEL VQSAAMVMSR EDAAGNAMVP MYSDHHPGAG GGGVYSGTGG TSTSMNLSLD NRMVYLNLGM DVMNHGDGGG GDGGGSRSGQ
501: GGPSSLFSPH GFP

Best Arabidopsis Sequence Match ( AT2G41370.1 )
(BLAST)

001: MSNLEESLRS LSLDFLNLLI NGQAFSDVTF SVEGRLVHAH RCILAARSLF FRKFFCGTDS PQPVTGIDPT QHGSVPASPT RGSTAPAGII PVNSVGYEVF
101: LLLLQFLYSG QVSIVPQKHE PRPNCGERGC WHTHCSAAVD LALDTLAASR YFGVEQLALL TQKQLASMVE KASIEDVMKV LIASRKQDMH QLWTTCSHLV
201: AKSGLPPEIL AKHLPIDVVT KIEELRLKSS IARRSLMPHN HHHDLSVAQD LEDQKIRRMR RALDSSDVEL VKLMVMGEGL NLDESLALHY AVESCSREVV
301: KALLELGAAD VNYPAGPAGK TPLHIAAEMV SPDMVAVLLD HHADPNVRTV GGITPLDILR TLTSDFLFKG AVPGLTHIEP NKLRLCLELV QSAAMVISRE
401: EGNNSNNQNN DNNTGIYPHM NEEHNSGSSG GSNNNLDSRL VYLNLGAGTG QMGPGRDQGD DHNSQREGMS RHHHHHQDPS TMYHHHHQHH F

Arabidopsis Description

NPR5Regulatory protein NPR5 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVC2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.