Factsheet for Bra004617.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra036832.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G41370.1	Bra036832.1-P	AT3G51180.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX79940	Canola	cytosol	99.68	99.68
Bra014645.1-P	Field mustard	cytosol	74.45	81.1
Os01t0948900-01	Rice	cytosol	70.66	66.47
AT2G41370.1	Thale cress	cytosol	95.58	61.71
Bra016938.1-P	Field mustard	cytosol	92.74	60.37
Solyc05g018160.1.1	Tomato	cytosol	52.68	59.64
Os12t0138500-01	Rice	cytosol	58.04	56.62
GSMUA_Achr5P08160_001	Banana	cytosol	73.82	54.8
GSMUA_AchrUn_...	Banana	cytosol	71.92	54.42
GSMUA_Achr3P08710_001	Banana	cytosol	71.92	53.52
Bra003268.1-P	Field mustard	cytosol, endoplasmic reticulum, plastid	77.92	53.46
GSMUA_Achr11P...	Banana	cytosol	72.56	53.24
VIT_08s0007g05740.t01	Wine grape	cytosol	82.02	53.06
Bra007306.1-P	Field mustard	cytosol	76.34	52.38
PGSC0003DMT400027591	Potato	cytosol	76.03	52.28
KRH66789	Soybean	cytosol	80.13	52.16
Solyc04g040220.2.1	Tomato	cytosol	76.03	51.72
KRH72058	Soybean	cytosol	77.29	51.47
GSMUA_Achr8P22070_001	Banana	cytosol	67.19	51.33
PGSC0003DMT400076710	Potato	cytosol	77.6	50.51
PGSC0003DMT400021076	Potato	cytosol	76.97	49.8
Solyc10g079750.1.1	Tomato	cytosol	76.34	49.59
Solyc10g079460.1.1	Tomato	cytosol	76.97	49.39
GSMUA_AchrUn_...	Banana	cytosol	68.14	48.21
GSMUA_Achr5P16220_001	Banana	cytosol	65.62	47.17
Zm00001d011878_P001	Maize	cytosol	69.4	44.9
OQU88196	Sorghum	cytosol	70.35	43.98
Zm00001d042111_P001	Maize	cytosol	70.03	43.7
TraesCS3D01G484100.1	Wheat	cytosol	70.03	43.44
HORVU3Hr1G106880.5	Barley	cytosol	70.03	43.27
TraesCS3B01G537400.1	Wheat	cytosol	70.03	43.19
TraesCS3A01G489000.1	Wheat	cytosol	70.03	43.19
EES16520	Sorghum	cytosol	57.73	38.12
Zm00001d023246_P001	Maize	cytosol	57.1	38.11
Zm00001d052468_P002	Maize	cytosol	56.47	38.0
Os11t0141900-00	Rice	cytosol	58.04	37.25
EES09234	Sorghum	cytosol	56.78	37.19
Zm00001d004966_P001	Maize	cytosol	55.2	37.0
TraesCS5A01G134700.2	Wheat	cytosol	57.41	36.92
TraesCS5B01G133700.1	Wheat	cytosol	57.41	36.92
TraesCS5D01G139600.1	Wheat	cytosol	57.41	36.92
Bra013416.1-P	Field mustard	plastid	26.5	14.29
Bra021949.1-P	Field mustard	plastid	25.24	14.23
Bra027690.1-P	Field mustard	cytosol, plastid	24.61	13.68
Bra025093.1-P	Field mustard	plastid	22.71	13.19
Bra013950.1-P	Field mustard	cytosol	22.71	12.44
Bra013952.1-P	Field mustard	cytosol	23.66	12.4
Bra010439.1-P	Field mustard	cytosol	22.08	7.28
Bra004618.1-P	Field mustard	cytosol	3.15	5.49

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.1	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	EnsemblPlantsGene:Bra004617
EnsemblPlants:Bra004617.1	EnsemblPlants:Bra004617.1-P	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR002110
InterPro:IPR020683	InterPro:IPR036770	UniProt:M4CK83	InterPro:NPR_central_dom	PFAM:PF11900	PFAM:PF12796
PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR24413	PANTHER:PTHR24413:SF116	SMART:SM00248	SUPFAM:SSF48403
UniParc:UPI000254768F	SEG:seg	:	:	:	:

Description

AT2G41370 (E=2e-158) BOP2 | BOP2 (BLADE ON PETIOLE2); protein binding

Coordinates

chrA05:-:1075963..1076916

Molecular Weight (calculated)

35185.0 Da

IEP (calculated)

6.705

GRAVY (calculated)

-0.424

Length

317 amino acids

Sequence
(BLAST)

001: MVEKASIEDV MKVLIASRKQ DMHHLWTTCS HLVAKSGLPP EILAKHLTID VVAKIEELRL KSSIARRSLM PHHHHHDLTV AQDLEDQKIR RMRRALDSSD
101: VELVKLMVMG EGLNLDESLA LHYAVESCSR EVVKALLELG AADVNYPAGP AGKTPLHIAA EMVSPDMVAV LLDHHADPNV RTVGGITPLD ILRTLTSDFL
201: FKGAVPGLTH IEPNKLRLCL ELVQSAAMVI SREEGNNSNN NDHNNAIYPQ MNDERNSGSS GGSNNNLDSR FVYLNLGAGQ MGPGRDHGDD HNSQREGMSR
301: HHHDPSTMYH HHHQHHF

Best Arabidopsis Sequence Match ( AT2G41370.1 )
(BLAST)

001: MSNLEESLRS LSLDFLNLLI NGQAFSDVTF SVEGRLVHAH RCILAARSLF FRKFFCGTDS PQPVTGIDPT QHGSVPASPT RGSTAPAGII PVNSVGYEVF
101: LLLLQFLYSG QVSIVPQKHE PRPNCGERGC WHTHCSAAVD LALDTLAASR YFGVEQLALL TQKQLASMVE KASIEDVMKV LIASRKQDMH QLWTTCSHLV
201: AKSGLPPEIL AKHLPIDVVT KIEELRLKSS IARRSLMPHN HHHDLSVAQD LEDQKIRRMR RALDSSDVEL VKLMVMGEGL NLDESLALHY AVESCSREVV
301: KALLELGAAD VNYPAGPAGK TPLHIAAEMV SPDMVAVLLD HHADPNVRTV GGITPLDILR TLTSDFLFKG AVPGLTHIEP NKLRLCLELV QSAAMVISRE
401: EGNNSNNQNN DNNTGIYPHM NEEHNSGSSG GSNNNLDSRL VYLNLGAGTG QMGPGRDQGD DHNSQREGMS RHHHHHQDPS TMYHHHHQHH F

Arabidopsis Description

NPR5Regulatory protein NPR5 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVC2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.