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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 3
  • golgi 2
  • cytosol 2
  • nucleus 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plastid, secretory
BaCelLo:secretory
MultiLoc:cytosol
Plant-mPloc:nucleus, plasma membrane
PProwler:secretory
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra016938.1-P Field mustard cytosol 82.97 31.01
Bra007306.1-P Field mustard cytosol 70.33 27.71
Bra003268.1-P Field mustard cytosol, endoplasmic reticulum, plastid 65.38 25.76
Bra013416.1-P Field mustard plastid 28.02 8.67
Bra021949.1-P Field mustard plastid 26.37 8.54
Bra025093.1-P Field mustard plastid 25.27 8.42
Bra027690.1-P Field mustard cytosol, plastid 24.18 7.72
Bra013950.1-P Field mustard cytosol 21.43 6.74
Bra013952.1-P Field mustard cytosol 20.33 6.12
Bra010439.1-P Field mustard cytosol 21.98 4.16
Bra004617.1-P Field mustard cytosol 5.49 3.15
Bra014645.1-P Field mustard cytosol 4.95 3.09
Protein Annotations
EnsemblPlants:Bra004618.1EnsemblPlants:Bra004618.1-PEnsemblPlantsGene:Bra004618Gene3D:3.30.710.10GO:GO:0003674GO:GO:0005488
GO:GO:0005515InterPro:BTB/POZ_domInterPro:IPR000210InterPro:SKP1/BTB/POZ_sfPANTHER:PTHR24413PANTHER:PTHR24413:SF116
PFAM:PF00651PFscan:PS50097SEG:segSMART:SM00225SUPFAM:SSF54695UniParc:UPI0002547690
UniProt:M4CK84MapMan:35.1::::
Description
AT2G41370 (E=6e-074) BOP2 | BOP2 (BLADE ON PETIOLE2); protein binding
Coordinates
chrA05:-:1077457..1078005
Molecular Weight (calculated)
19813.7 Da
IEP (calculated)
8.251
GRAVY (calculated)
0.066
Length
182 amino acids
Sequence
(BLAST)
001: MSSLEESLRS LSLDYLNLLI NGQAFSDVTF SVEGRLVHAH RCILAARSLF FRKFFCGTDS PQPGTGIDPT RHGSVPASPT RGSQAPAGVI PVNSVGYAVF
101: LLLLQFLYSG QVSIVPQKHE PRPNCGERGC WHTHCSAAFD LALDTLAPSR YFGVEQLALL THVSLSLSLS LFTHHAHPKA RT
Best Arabidopsis Sequence Match ( AT3G57130.2 )
(BLAST)
001: MSNTFEESLK SMSLDYLNLL INGQAFSDVT FSVEGRLVHA HRCILAARSL FFRKFFCESD PSQPGAEPAN QTGSGARAAA VGGVIPVNSV GYEVFLLLLQ
101: FLYSGQVSIV PHKHEPRSNC GDRGCWHTHC TAAVDLSLDI LAAARYFGVE QLALLTQCNF LSRFRRQWTD VFCTPRNFLK ME
Arabidopsis Description
NPR6Regulatory protein NPR6 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1I7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.