Factsheet for Bra013952.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89362	Canola	cytosol	98.84	98.84
AT4G26120.2	Thale cress	cytosol, plastid	71.07	71.55
Bra027690.1-P	Field mustard	cytosol, plastid	59.83	63.51
Bra013950.1-P	Field mustard	cytosol	56.2	58.72
VIT_11s0016g01990.t01	Wine grape	cytosol	49.59	51.37
Solyc07g040690.2.1	Tomato	cytosol	47.77	50.17
KRH37416	Soybean	cytosol	47.27	49.14
GSMUA_Achr7P09190_001	Banana	cytosol	43.97	46.26
GSMUA_Achr2P16670_001	Banana	cytosol	44.46	46.06
Zm00001d039469_P001	Maize	cytosol	42.15	43.74
Os01t0194300-01	Rice	cytosol	41.82	43.47
TraesCS3A01G105400.1	Wheat	cytosol	41.32	43.33
EES00131	Sorghum	cytosol	41.49	43.05
GSMUA_Achr6P00950_001	Banana	nucleus	44.79	43.02
TraesCS3B01G123800.1	Wheat	cytosol	40.83	42.81
TraesCS3D01G107500.1	Wheat	cytosol	40.99	42.76
TraesCS4A01G470500.1	Wheat	cytosol	34.55	42.74
TraesCS7D01G019000.1	Wheat	cytosol, mitochondrion	34.38	42.71
HORVU3Hr1G019230.6	Barley	cytosol	41.16	41.64
GSMUA_AchrUn_...	Banana	cytosol	39.34	41.39
GSMUA_Achr3P25880_001	Banana	cytosol	38.02	40.49
GSMUA_Achr8P05490_001	Banana	cytosol	38.51	40.1
TraesCS7A01G021800.1	Wheat	cytosol, plastid	34.38	37.21
Bra021949.1-P	Field mustard	plastid	33.88	36.48
Bra025093.1-P	Field mustard	plastid	32.56	36.08
Bra013416.1-P	Field mustard	plastid	34.38	35.37
Bra010439.1-P	Field mustard	cytosol	55.87	35.14
Bra014645.1-P	Field mustard	cytosol	12.56	26.12
Bra007306.1-P	Field mustard	cytosol	18.84	24.68
Bra004617.1-P	Field mustard	cytosol	12.4	23.66
Bra003268.1-P	Field mustard	cytosol, endoplasmic reticulum, plastid	18.02	23.59
Bra016938.1-P	Field mustard	cytosol	17.85	22.18
Bra004618.1-P	Field mustard	cytosol	6.12	20.33
TraesCS7A01G022800.1	Wheat	cytosol	37.19	15.03

Protein Annotations

Gene3D:1.25.40.20	MapMan:11.8.2.2	MapMan:26.8.3.1.1	Gene3D:3.30.710.10	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	InterPro:BTB/POZ_dom	EnsemblPlantsGene:Bra013952	EnsemblPlants:Bra013952.1	EnsemblPlants:Bra013952.1-P	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0009719	GO:GO:0010200	InterPro:IPR000210
InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	UniProt:M4DBU2	InterPro:NPR1/NIM1-like_C	PFAM:PF00651
PFAM:PF12313	PFAM:PF12796	PFscan:PS50088	PFscan:PS50097	PFscan:PS50297	PANTHER:PTHR24413
PANTHER:PTHR24413:SF124	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF54695
UniParc:UPI0002546BF1	SEG:seg	:	:	:	:

Description

AT4G26120 (E=3e-229) | ankyrin repeat family protein / BTB/POZ domain-containing protein

Coordinates

chrA01:+:8667521..8669837

Molecular Weight (calculated)

67876.8 Da

IEP (calculated)

6.255

GRAVY (calculated)

-0.205

Length

605 amino acids

Sequence
(BLAST)

001: MATIARLSGS YEITNGYSFI AESSIDNPAA EFLTSPEVSA LQLLSTCLES VFDSPETFYS DAKLVLSDGR EISFHRCVLS ARIPVFKNAL AAAVKDRKPA
101: AVVKLDLKEI ARDHDVGFDS VAMVLAYVYS GRVRPPRKGA SDCVDDGCCH VACRPAVEFL MELLYLAYVF EIPELVSLYE RQFLNIIDKI VIEDILVIFK
201: LANICGETYK KLLVTCLEII AKSDIEIVTL DKSLPQDIVK RVTDIRNELG LEPPEPDKHV MNIYKALDSD DVELVKMLLT EGHTSLDDAY ALHYAVAHSD
301: VKTASDLIDL ELADVDHRNM RGYTALHVAA MRNEPKLMVY LLTKGANASE TTFDGRTALV IAKRLTKASE YNASTEQGKP SLKGGLCIEV LEHARKLGRL
401: PRDGLPSLPA TPDELRMRLL YLENRVALAR ILFPVEAQVV MDIVKLEGTS EFTASSLDPD QQSCAKRTSL DLNIAPFVIR EEHLCRLIAL TNTVKLGKRY
501: FPRCSLDHFM DTEDLNHLAC LEEDTPEKRL QKRQRYMELQ ETVMKTFSEE KDDSGKSSKT GSVRSNGKLS HRRLRVDKRD LEKRICRNRK GDSRIEKHVT
601: FEAGN

Best Arabidopsis Sequence Match ( AT4G26120.1 )
(BLAST)

001: MATTTTTTTA RFSDSYEFSN TSGNSFFAAE SSLDYPTEFL TPPEVSALKL LSNCLESVFD SPETFYSDAK LVLAGGREVS FHRCILSARI PVFKSALATV
101: KEQKSSTTVK LQLKEIARDY EVGFDSVVAV LAYVYSGRVR SPPKGASACV DDDCCHVACR SKVDFMVEVL YLSFVFQIQE LVTLYERQFL EIVDKVVVED
201: ILVIFKLDTL CGTTYKKLLD RCIEIIVKSD IELVSLEKSL PQHIFKQIID IREALCLEPP KLERHVKNIY KALDSDDVEL VKMLLLEGHT NLDEAYALHF
301: AIAHCAVKTA YDLLELELAD VNLRNPRGYT VLHVAAMRKE PKLIISLLMK GANILDTTLD GRTALVIVKR LTKADDYKTS TEDGTPSLKG GLCIEVLEHE
401: QKLEYLSPIE ASLSLPVTPE ELRMRLLYYE NRVALARLLF PVETETVQGI AKLEETCEFT ASSLEPDHHI GEKRTSLDLN MAPFQIHEKH LSRLRALCKT
501: VELGKRYFKR CSLDHFMDTE DLNHLASVEE DTPEKRLQKK QRYMELQETL MKTFSEDKEE CGKSSTPKPT SAVRSNRKLS HRRLKVDKRD FLKRPYGNGD

Arabidopsis Description

Ankyrin repeat family protein / BTB/POZ domain-containing protein [Source:TAIR;Acc:AT4G26120]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.