Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G107500.1 | Wheat | cytosol | 96.36 | 95.86 |
| TraesCS3A01G105400.1 | Wheat | cytosol | 95.32 | 95.32 |
| HORVU3Hr1G019230.6 | Barley | cytosol | 92.55 | 89.3 |
| Os01t0194300-01 | Rice | cytosol | 81.63 | 80.93 |
| EES00131 | Sorghum | cytosol | 78.68 | 77.87 |
| Zm00001d039469_P001 | Maize | cytosol | 78.34 | 77.53 |
| GSMUA_Achr2P16670_001 | Banana | cytosol | 65.51 | 64.73 |
| GSMUA_Achr7P09190_001 | Banana | cytosol | 63.26 | 63.48 |
| Solyc07g040690.2.1 | Tomato | cytosol | 58.41 | 58.51 |
| GSMUA_Achr6P00950_001 | Banana | nucleus | 62.91 | 57.62 |
| VIT_11s0016g01990.t01 | Wine grape | cytosol | 56.85 | 56.16 |
| KRH37416 | Soybean | cytosol | 54.25 | 53.78 |
| CDY34413 | Canola | cytosol | 46.27 | 46.92 |
| Bra027690.1-P | Field mustard | cytosol, plastid | 46.27 | 46.84 |
| CDY25575 | Canola | cytosol | 45.93 | 46.49 |
| AT1G64280.1 | Thale cress | cytosol | 44.54 | 43.34 |
| CDY50004 | Canola | cytosol | 44.19 | 42.79 |
| Bra013950.1-P | Field mustard | cytosol | 42.81 | 42.66 |
| AT4G26120.2 | Thale cress | cytosol, plastid | 43.5 | 41.76 |
| CDX94371 | Canola | cytosol | 42.98 | 40.99 |
| Bra013952.1-P | Field mustard | cytosol | 42.81 | 40.83 |
| CDX94376 | Canola | cytosol | 42.81 | 40.76 |
| CDX89364 | Canola | cytosol | 42.81 | 40.62 |
| CDX89362 | Canola | cytosol | 42.29 | 40.33 |
| TraesCS3B01G337700.1 | Wheat | plastid | 39.17 | 37.11 |
| TraesCS4B01G018900.2 | Wheat | cytosol, plastid | 37.26 | 35.77 |
| Bra010439.1-P | Field mustard | cytosol | 42.63 | 25.57 |
| CDY14314 | Canola | nucleus | 37.09 | 25.42 |
| TraesCS5B01G133700.1 | Wheat | cytosol | 21.32 | 24.95 |
| TraesCS3B01G537400.1 | Wheat | cytosol | 22.18 | 24.9 |
Protein Annotations
| Gene3D:1.25.40.20 | MapMan:11.8.2.2 | MapMan:26.8.3.1.1 | Gene3D:3.30.710.10 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom |
| InterPro:Ankyrin_rpt-contain_sf | InterPro:BTB/POZ_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006950 | GO:GO:0008150 |
| GO:GO:0009605 | GO:GO:0009607 | GO:GO:0042742 | GO:GO:0050832 | GO:GO:0080027 | InterPro:IPR000210 |
| InterPro:IPR002110 | InterPro:IPR020683 | InterPro:IPR036770 | InterPro:NPR1/NIM1-like_C | InterPro:NPR_central_dom | PFAM:PF00651 |
| PFAM:PF11900 | PFAM:PF12313 | PFAM:PF12796 | PFscan:PS50088 | PFscan:PS50097 | PFscan:PS50297 |
| PANTHER:PTHR24413 | PANTHER:PTHR24413:SF124 | InterPro:SKP1/BTB/POZ_sf | SMART:SM00225 | SMART:SM00248 | SUPFAM:SSF48403 |
| SUPFAM:SSF54695 | EnsemblPlantsGene:TraesCS3B01G123800 | EnsemblPlants:TraesCS3B01G123800.1 | TIGR:cd00204 | SEG:seg | : |
Description
No Description!
Coordinates
chr3B:+:96812410..96816113
Molecular Weight (calculated)
63832.3 Da
IEP (calculated)
5.455
GRAVY (calculated)
-0.202
Length
577 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAPSSHVTA SFSDCDDSVS MEDAAPDADV EALRRLSDNL AAAFRSPDDF AFLADALVAV PGAPDLRVHR CVLSARSPFL RALFKRRAAA AGSSGGVEGN
101: RLELRELLGD EVEVRYEALE LVLDYLYSGR VRDLPKSACA CVDEGGCAHV GCHPAVSFMA QVLFAASTFQ VGELANLFQR HLLDFLDKVE VDNLPLILSV
201: ANLCNKSCVK LFERCMEMVV RSNLDMITLE KALPQDVIKQ ITDLRITLGL ASPEDNGFPN KHVRRILRAL DSDDVELVRM LLTEGQTNLD DAFALHYAVE
301: HCDSKITTEL LDIALADVNL RNPRGYTVLH IAAKRRDPKI VVSLLTKGAR PSDFTFDGRK AVQISKRLTK HGDYFGNTEE GKPSPNDKLC IEILEQAERR
401: DPQLGEASLS LALAGDCLRG KLLYLENRVA LARIMFPIEA RVAMDIAQVD GTLEFTLGSS TNPPLEITTV DLNDTSFKMK EEHLARMRAL SKTVELGKRF
501: FPRCSNVLDK IMDDEPELAS LGRDASSERK RRFHDLQDTL LKAFSEDKEE FNRTTTLSSS SSSTSTVARN LAGRTRR
101: RLELRELLGD EVEVRYEALE LVLDYLYSGR VRDLPKSACA CVDEGGCAHV GCHPAVSFMA QVLFAASTFQ VGELANLFQR HLLDFLDKVE VDNLPLILSV
201: ANLCNKSCVK LFERCMEMVV RSNLDMITLE KALPQDVIKQ ITDLRITLGL ASPEDNGFPN KHVRRILRAL DSDDVELVRM LLTEGQTNLD DAFALHYAVE
301: HCDSKITTEL LDIALADVNL RNPRGYTVLH IAAKRRDPKI VVSLLTKGAR PSDFTFDGRK AVQISKRLTK HGDYFGNTEE GKPSPNDKLC IEILEQAERR
401: DPQLGEASLS LALAGDCLRG KLLYLENRVA LARIMFPIEA RVAMDIAQVD GTLEFTLGSS TNPPLEITTV DLNDTSFKMK EEHLARMRAL SKTVELGKRF
501: FPRCSNVLDK IMDDEPELAS LGRDASSERK RRFHDLQDTL LKAFSEDKEE FNRTTTLSSS SSSTSTVARN LAGRTRR
001: MATTTTTTTA RFSDSYEFSN TSGNSFFAAE SSLDYPTEFL TPPEVSALKL LSNCLESVFD SPETFYSDAK LVLAGGREVS FHRCILSARI PVFKSALATV
101: KEQKSSTTVK LQLKEIARDY EVGFDSVVAV LAYVYSGRVR SPPKGASACV DDDCCHVACR SKVDFMVEVL YLSFVFQIQE LVTLYERQFL EIVDKVVVED
201: ILVIFKLDTL CGTTYKKLLD RCIEIIVKSD IELVSLEKSL PQHIFKQIID IREALCLEPP KLERHVKNIY KALDSDDVEL VKMLLLEGHT NLDEAYALHF
301: AIAHCAVKTA YDLLELELAD VNLRNPRGYT VLHVAAMRKE PKLIISLLMK GANILDTTLD GRTALVIVKR LTKADDYKTS TEDGTPSLKG GLCIEVLEHE
401: QKLEYLSPIE ASLSLPVTPE ELRMRLLYYE NRVALARLLF PVETETVQGI AKLEETCEFT ASSLEPDHHI GEKRTSLDLN MAPFQIHEKH LSRLRALCKT
501: VELGKRYFKR CSLDHFMDTE DLNHLASVEE DTPEKRLQKK QRYMELQETL MKTFSEDKEE CGKSSTPKPT SAVRSNRKLS HRRLKVDKRD FLKRPYGNGD
101: KEQKSSTTVK LQLKEIARDY EVGFDSVVAV LAYVYSGRVR SPPKGASACV DDDCCHVACR SKVDFMVEVL YLSFVFQIQE LVTLYERQFL EIVDKVVVED
201: ILVIFKLDTL CGTTYKKLLD RCIEIIVKSD IELVSLEKSL PQHIFKQIID IREALCLEPP KLERHVKNIY KALDSDDVEL VKMLLLEGHT NLDEAYALHF
301: AIAHCAVKTA YDLLELELAD VNLRNPRGYT VLHVAAMRKE PKLIISLLMK GANILDTTLD GRTALVIVKR LTKADDYKTS TEDGTPSLKG GLCIEVLEHE
401: QKLEYLSPIE ASLSLPVTPE ELRMRLLYYE NRVALARLLF PVETETVQGI AKLEETCEFT ASSLEPDHHI GEKRTSLDLN MAPFQIHEKH LSRLRALCKT
501: VELGKRYFKR CSLDHFMDTE DLNHLASVEE DTPEKRLQKK QRYMELQETL MKTFSEDKEE CGKSSTPKPT SAVRSNRKLS HRRLKVDKRD FLKRPYGNGD
Arabidopsis Description
Ankyrin repeat family protein / BTB/POZ domain-containing protein [Source:TAIR;Acc:AT4G26120]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.