Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G123800.1 | Wheat | cytosol | 95.86 | 96.36 |
| TraesCS3A01G105400.1 | Wheat | cytosol | 94.66 | 95.15 |
| HORVU3Hr1G019230.6 | Barley | cytosol | 91.9 | 89.13 |
| Os01t0194300-01 | Rice | cytosol | 80.34 | 80.07 |
| TraesCS7D01G019000.1 | Wheat | cytosol, mitochondrion | 64.83 | 77.21 |
| EES00131 | Sorghum | cytosol | 77.41 | 77.02 |
| Zm00001d039469_P001 | Maize | cytosol | 77.24 | 76.84 |
| GSMUA_Achr2P16670_001 | Banana | cytosol | 65.86 | 65.41 |
| GSMUA_Achr7P09190_001 | Banana | cytosol | 62.93 | 63.48 |
| Solyc07g040690.2.1 | Tomato | cytosol | 57.59 | 57.99 |
| GSMUA_Achr6P00950_001 | Banana | nucleus | 62.59 | 57.62 |
| VIT_11s0016g01990.t01 | Wine grape | cytosol | 56.9 | 56.51 |
| KRH37416 | Soybean | cytosol | 53.97 | 53.78 |
| Bra027690.1-P | Field mustard | cytosol, plastid | 46.03 | 46.84 |
| CDY34413 | Canola | cytosol | 45.86 | 46.75 |
| CDY25575 | Canola | cytosol | 45.86 | 46.67 |
| AT1G64280.1 | Thale cress | cytosol | 43.62 | 42.66 |
| Bra013950.1-P | Field mustard | cytosol | 42.59 | 42.66 |
| CDY50004 | Canola | cytosol | 43.45 | 42.28 |
| AT4G26120.2 | Thale cress | cytosol, plastid | 43.1 | 41.6 |
| Bra013952.1-P | Field mustard | cytosol | 42.76 | 40.99 |
| CDX94371 | Canola | cytosol | 42.76 | 40.99 |
| CDX94376 | Canola | cytosol | 42.41 | 40.59 |
| CDX89362 | Canola | cytosol | 42.24 | 40.5 |
| CDX89364 | Canola | cytosol | 42.41 | 40.46 |
| TraesCS3D01G302900.1 | Wheat | cytosol, plastid | 39.14 | 37.4 |
| TraesCS4D01G017500.1 | Wheat | cytosol | 37.41 | 36.41 |
| Bra010439.1-P | Field mustard | cytosol | 41.9 | 25.26 |
| CDY14314 | Canola | nucleus | 36.38 | 25.06 |
| TraesCS3D01G484100.1 | Wheat | cytosol | 21.9 | 24.85 |
| TraesCS5D01G139600.1 | Wheat | cytosol | 21.03 | 24.75 |
Protein Annotations
| Gene3D:1.25.40.20 | MapMan:11.8.2.2 | MapMan:26.8.3.1.1 | Gene3D:3.30.710.10 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom |
| InterPro:Ankyrin_rpt-contain_sf | InterPro:BTB/POZ_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR000210 |
| InterPro:IPR002110 | InterPro:IPR020683 | InterPro:IPR036770 | InterPro:NPR1/NIM1-like_C | InterPro:NPR_central_dom | PFAM:PF00651 |
| PFAM:PF11900 | PFAM:PF12313 | PFAM:PF12796 | PFscan:PS50088 | PFscan:PS50097 | PFscan:PS50297 |
| PANTHER:PTHR24413 | PANTHER:PTHR24413:SF124 | InterPro:SKP1/BTB/POZ_sf | SMART:SM00225 | SMART:SM00248 | SUPFAM:SSF48403 |
| SUPFAM:SSF54695 | EnsemblPlantsGene:TraesCS3D01G107500 | EnsemblPlants:TraesCS3D01G107500.1 | TIGR:cd00204 | SEG:seg | : |
Description
No Description!
Coordinates
chr3D:+:61072417..61076102
Molecular Weight (calculated)
63788.2 Da
IEP (calculated)
5.101
GRAVY (calculated)
-0.155
Length
580 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAPSSHVTA SFSDCDDSVS MGDAAPDADV EALRRLSDNL AAAFRSPDDF AFLADALVAV PGAPDLRVHR CVLSARSPFL RALFKRRAAA AAATGSSGGA
101: EGNRVELREL LGEEVEVGYE ALELVLDYLY SGRVRDLPKS ACACVDVDGC AHVGCHPAVS FMAQVLFAAS TFQVGELASL FQRHLLDFLD KVEVDNLPLV
201: LSVANLCNKS CVKLFERCLE MVVQSDLDMI TLEKALPQDV IKQITDSRIT LGLASPEDNG FPNKHVRRIL RALDSDDVEL VRMLLTEGQT NLDDAFALHY
301: AVEHCDSKIT TELLDIALAD VNLRNPRGYT VLHIAAKRRD PKIVVSLLTK GARPSDLTFD GRKAVQISKR LTKHGDYFGN TEEGKPSPND KLCIEILEQA
401: ERRDPQFGEA SVSLALAGDC LRGMLLYLEN RVALARIMFP IEARVAMDIA QVDGTLEFTL GYGTNPPLEI TTVDLNDTSF KMKEEHLARM RALSKTVELG
501: KRFFPRCSNV LDKIMDDEPE LASLGTDACS ERKRRFHDLQ DTLLKAFSED KEEFNRTTTL SSSSSSTSTV ARNLAGRTRR
101: EGNRVELREL LGEEVEVGYE ALELVLDYLY SGRVRDLPKS ACACVDVDGC AHVGCHPAVS FMAQVLFAAS TFQVGELASL FQRHLLDFLD KVEVDNLPLV
201: LSVANLCNKS CVKLFERCLE MVVQSDLDMI TLEKALPQDV IKQITDSRIT LGLASPEDNG FPNKHVRRIL RALDSDDVEL VRMLLTEGQT NLDDAFALHY
301: AVEHCDSKIT TELLDIALAD VNLRNPRGYT VLHIAAKRRD PKIVVSLLTK GARPSDLTFD GRKAVQISKR LTKHGDYFGN TEEGKPSPND KLCIEILEQA
401: ERRDPQFGEA SVSLALAGDC LRGMLLYLEN RVALARIMFP IEARVAMDIA QVDGTLEFTL GYGTNPPLEI TTVDLNDTSF KMKEEHLARM RALSKTVELG
501: KRFFPRCSNV LDKIMDDEPE LASLGTDACS ERKRRFHDLQ DTLLKAFSED KEEFNRTTTL SSSSSSTSTV ARNLAGRTRR
001: MMATTTTTTT ARFSDSYEFS NTSGNSFFAA ESSLDYPTEF LTPPEVSALK LLSNCLESVF DSPETFYSDA KLVLAGGREV SFHRCILSAR IPVFKSALAT
101: VKEQKSSTTV KLQLKEIARD YEVGFDSVVA VLAYVYSGRV RSPPKGASAC VDDDCCHVAC RSKVDFMVEV LYLSFVFQIQ ELVTLYERQF LEIVDKVVVE
201: DILVIFKLDT LCGTTYKKLL DRCIEIIVKS DIELVSLEKS LPQHIFKQII DIREALCLEP PKLERHVKNI YKALDSDDVE LVKMLLLEGH TNLDEAYALH
301: FAIAHCAVKT AYDLLELELA DVNLRNPRGY TVLHVAAMRK EPKLIISLLM KGANILDTTL DGRTALVIVK RLTKADDYKT STEDGTPSLK GGLCIEVLEH
401: EQKLEYLSPI EASLSLPVTP EELRMRLLYY ENRVALARLL FPVETETVQG IAKLEETCEF TASSLEPDHH IGEKRTSLDL NMAPFQIHEK HLSRLRALCK
501: TVELGKRYFK RCSLDHFMDT EDLNHLASVE EDTPEKRLQK KQRYMELQET LMKTFSEDKE ECGKSSTPKP TSAVRSNRKL SHRRLKVDKR DFLKRPYGNG
601: D
101: VKEQKSSTTV KLQLKEIARD YEVGFDSVVA VLAYVYSGRV RSPPKGASAC VDDDCCHVAC RSKVDFMVEV LYLSFVFQIQ ELVTLYERQF LEIVDKVVVE
201: DILVIFKLDT LCGTTYKKLL DRCIEIIVKS DIELVSLEKS LPQHIFKQII DIREALCLEP PKLERHVKNI YKALDSDDVE LVKMLLLEGH TNLDEAYALH
301: FAIAHCAVKT AYDLLELELA DVNLRNPRGY TVLHVAAMRK EPKLIISLLM KGANILDTTL DGRTALVIVK RLTKADDYKT STEDGTPSLK GGLCIEVLEH
401: EQKLEYLSPI EASLSLPVTP EELRMRLLYY ENRVALARLL FPVETETVQG IAKLEETCEF TASSLEPDHH IGEKRTSLDL NMAPFQIHEK HLSRLRALCK
501: TVELGKRYFK RCSLDHFMDT EDLNHLASVE EDTPEKRLQK KQRYMELQET LMKTFSEDKE ECGKSSTPKP TSAVRSNRKL SHRRLKVDKR DFLKRPYGNG
601: D
Arabidopsis Description
Ankyrin repeat family protein / BTB/POZ domain-containing protein [Source:TAIR;Acc:AT4G26120]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.