Factsheet for Bra013950.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 1
cytosol 2
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89364	Canola	cytosol	97.24	92.6
CDX94376	Canola	cytosol	96.55	92.24
Bra027690.1-P	Field mustard	cytosol, plastid	65.98	67.02
Bra013952.1-P	Field mustard	cytosol	58.72	56.2
Solyc07g040690.2.1	Tomato	cytosol	51.47	51.74
VIT_11s0016g01990.t01	Wine grape	cytosol	51.47	51.03
GSMUA_Achr7P09190_001	Banana	cytosol	46.98	47.3
GSMUA_Achr2P16670_001	Banana	cytosol	47.67	47.26
KRH37416	Soybean	cytosol	46.8	46.56
Os01t0194300-01	Rice	cytosol	44.39	44.16
TraesCS3A01G105400.1	Wheat	cytosol	43.87	44.02
Zm00001d039469_P001	Maize	cytosol	43.52	43.22
GSMUA_Achr6P00950_001	Banana	nucleus	46.98	43.17
TraesCS3B01G123800.1	Wheat	cytosol	42.66	42.81
Bra010439.1-P	Field mustard	cytosol	70.81	42.62
TraesCS3D01G107500.1	Wheat	cytosol	42.66	42.59
TraesCS7D01G019000.1	Wheat	cytosol, mitochondrion	35.58	42.3
EES00131	Sorghum	cytosol	42.49	42.2
HORVU3Hr1G019230.6	Barley	cytosol	43.01	41.64
GSMUA_AchrUn_...	Banana	cytosol	41.11	41.39
GSMUA_Achr3P25880_001	Banana	cytosol	40.41	41.2
TraesCS4A01G470500.1	Wheat	cytosol	34.54	40.9
GSMUA_Achr8P05490_001	Banana	cytosol	40.93	40.79
TraesCS7A01G021800.1	Wheat	cytosol, plastid	36.61	37.92
Bra021949.1-P	Field mustard	plastid	35.58	36.65
Bra025093.1-P	Field mustard	plastid	33.33	35.35
Bra013416.1-P	Field mustard	plastid	33.85	33.33
Bra003268.1-P	Field mustard	cytosol, endoplasmic reticulum, plastid	20.38	25.54
Bra007306.1-P	Field mustard	cytosol	19.86	24.89
Bra014645.1-P	Field mustard	cytosol	12.44	24.74
Bra004617.1-P	Field mustard	cytosol	12.44	22.71
Bra016938.1-P	Field mustard	cytosol	19.0	22.59
Bra004618.1-P	Field mustard	cytosol	6.74	21.43
TraesCS7A01G022800.1	Wheat	cytosol	37.82	14.63

Protein Annotations

Gene3D:1.25.40.20	MapMan:11.8.2.2	MapMan:26.8.3.1.1	Gene3D:3.30.710.10	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	InterPro:BTB/POZ_dom	EnsemblPlantsGene:Bra013950	EnsemblPlants:Bra013950.1	EnsemblPlants:Bra013950.1-P	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770
UniProt:M4DBU0	InterPro:NPR1/NIM1-like_C	PFAM:PF00651	PFAM:PF12313	PFAM:PF13857	PFscan:PS50088
PFscan:PS50097	PFscan:PS50297	PANTHER:PTHR24413	PANTHER:PTHR24413:SF124	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225
SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF54695	UniParc:UPI0002546BEF	SEG:seg	:

Description

AT4G26120 (E=2e-173) | ankyrin repeat family protein / BTB/POZ domain-containing protein

Coordinates

chrA01:+:8651965..8654290

Molecular Weight (calculated)

64537.0 Da

IEP (calculated)

6.312

GRAVY (calculated)

-0.106

Length

579 amino acids

Sequence
(BLAST)

001: METIAGFDDF YEISSTSFLA APAPTDNSGS STVYPTELLT RPEVSAFQLL SNSLESVFDS PEAFYSDAKL VLSDDKEVSF HRCILSARSL FFKAALAAAE
101: KVQKSTPVKL ELKTLAAEYD VGFDSVVAVL AYVYSGRVRP PPKGVSECAD DSCCHVACRP AVDFMVEVLY LAFVFQIQEL VTMYQRHLLD VVDKVNIEDT
201: LVVLKLANIC GKACKKLFDK CREIIVKSNV DVVTLKKSLP ENIAKQVIDI RKELGLEVAE PEKHVSNIHK ALESDDLDLV VMLLKEGHTN LDEAYALHFA
301: VAYCDEKTAR NLLELGLADV NRRNPRGYTV LHVAAMRKEP TLIALLLTKG ANALETSLDG RTALLIAKQV TKAAECCILE KGKLAAKGGV CVEILKQPDN
401: KREPFPEDVF PSLAVAADEF KIRLIDLENR VQMARCLYPM EAQVAMDFAR MKGTREFVVT TATDLHMEPF KFVEMHQSRL TALSKTVEFG KRFFPRCSKV
501: LDDIVDSEDL TILALVEEDT PEQRQQKRQR FMEIQEIVQM AFSKDKEDLG KSSLSASSSS TSKLTGKKRS IAKPSHRRR

Best Arabidopsis Sequence Match ( AT1G64280.1 )
(BLAST)

001: MDTTIDGFAD SYEISSTSFV ATDNTDSSIV YLAAEQVLTG PDVSALQLLS NSFESVFDSP DDFYSDAKLV LSDGREVSFH RCVLSARSSF FKSALAAAKK
101: EKDSNNTAAV KLELKEIAKD YEVGFDSVVT VLAYVYSSRV RPPPKGVSEC ADENCCHVAC RPAVDFMLEV LYLAFIFKIP ELITLYQRHL LDVVDKVVIE
201: DTLVILKLAN ICGKACMKLL DRCKEIIVKS NVDMVSLEKS LPEELVKEII DRRKELGLEV PKVKKHVSNV HKALDSDDIE LVKLLLKEDH TNLDDACALH
301: FAVAYCNVKT ATDLLKLDLA DVNHRNPRGY TVLHVAAMRK EPQLILSLLE KGASASEATL EGRTALMIAK QATMAVECNN IPEQCKHSLK GRLCVEILEQ
401: EDKREQIPRD VPPSFAVAAD ELKMTLLDLE NRVALAQRLF PTEAQAAMEI AEMKGTCEFI VTSLEPDRLT GTKRTSPGVK IAPFRILEEH QSRLKALSKT
501: VELGKRFFPR CSAVLDQIMN CEDLTQLACG EDDTAEKRLQ KKQRYMEIQE TLKKAFSEDN LELGNSSLTD STSSTSKSTG GKRSNRKLSH RRR

Arabidopsis Description

NPR1Regulatory protein NPR1 [Source:UniProtKB/Swiss-Prot;Acc:P93002]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.