Factsheet for Bra013416.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 6
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78955	Canola	plastid	98.98	98.98
AT4G19660.2	Thale cress	cytosol, plastid	79.93	78.2
Bra025093.1-P	Field mustard	plastid	68.37	73.63
Bra021949.1-P	Field mustard	plastid	69.39	72.6
KRH36735	Soybean	cytosol, plastid	61.73	61.53
KRH11740	Soybean	plastid	61.73	61.53
VIT_10s0042g01250.t01	Wine grape	cytosol, plastid	59.01	59.11
Solyc02g069310.2.1	Tomato	cytosol, plastid	53.4	54.04
GSMUA_Achr5P02120_001	Banana	cytosol	53.4	53.77
PGSC0003DMT400054660	Potato	cytosol, plastid	53.06	53.7
GSMUA_Achr4P32060_001	Banana	cytosol, plastid	53.23	52.6
Zm00001d012660_P002	Maize	cytosol	53.91	51.05
EES01524	Sorghum	plastid	53.57	50.72
TraesCS3B01G337700.1	Wheat	plastid	51.19	49.43
TraesCS3D01G302900.1	Wheat	cytosol, plastid	50.51	48.93
HORVU3Hr1G074640.4	Barley	cytosol, plastid	51.02	48.62
TraesCS3A01G298800.1	Wheat	plastid	51.02	48.54
Os01t0767900-01	Rice	plastid	52.04	48.19
Zm00001d034944_P004	Maize	cytosol	35.54	45.93
Os03t0667100-01	Rice	cytosol	44.9	44.82
EER91108	Sorghum	plastid	44.73	43.98
HORVU4Hr1G003040.1	Barley	cytosol, plastid	43.37	43.29
TraesCS4A01G294400.1	Wheat	cytosol, plastid	43.71	42.76
TraesCS4B01G018900.2	Wheat	cytosol, plastid	43.71	42.76
TraesCS4D01G017500.1	Wheat	cytosol	43.2	42.62
Zm00001d013581_P001	Maize	cytosol	13.78	40.3
Bra027690.1-P	Field mustard	cytosol, plastid	37.07	38.25
Bra013952.1-P	Field mustard	cytosol	35.37	34.38
Bra013950.1-P	Field mustard	cytosol	33.33	33.85
Bra004618.1-P	Field mustard	cytosol	8.67	28.02
Bra007306.1-P	Field mustard	cytosol	21.43	27.27
Bra004617.1-P	Field mustard	cytosol	14.29	26.5
Bra016938.1-P	Field mustard	cytosol	21.94	26.49
Bra003268.1-P	Field mustard	cytosol, endoplasmic reticulum, plastid	20.58	26.19
Bra014645.1-P	Field mustard	cytosol	12.76	25.77
Bra010439.1-P	Field mustard	cytosol	33.67	20.58

Protein Annotations

Gene3D:1.25.40.20	MapMan:11.8.2.1	Gene3D:3.30.710.10	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf
InterPro:BTB/POZ_dom	EnsemblPlantsGene:Bra013416	EnsemblPlants:Bra013416.1	EnsemblPlants:Bra013416.1-P	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	UniProt:M4DAA6
InterPro:NPR1/NIM1-like_C	InterPro:NPR_central_dom	PFAM:PF00651	PFAM:PF11900	PFAM:PF12313	PFAM:PF12796
PFscan:PS50088	PFscan:PS50097	PFscan:PS50297	PANTHER:PTHR24413	PANTHER:PTHR24413:SF124	InterPro:SKP1/BTB/POZ_sf
SMART:SM00225	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF54695	UniParc:UPI0002546814	SEG:seg

Description

AT4G19660 (E=6e-250) NPR4 | NPR4 (NPR1-like protein 4); protein binding

Coordinates

chrA01:-:5512324..5514313

Molecular Weight (calculated)

66173.9 Da

IEP (calculated)

6.391

GRAVY (calculated)

-0.409

Length

588 amino acids

Sequence
(BLAST)

001: MAAATAMEPS SSISFTSSHL SNPSVVTNHQ SSSPNLEAAS LAKLSTDLEN LLTSSDCDYT DADITFEGES RAVGVHRCLL AARSKFFLDL FKKDRGSEEE
101: KKKPKYHIKD LLPNGHVGRE AFLHFLNYIY TGKLKPFPVE VSTCVDTGCV HDSCKPAIDF AVELMYASYT FKITELVSSF QRRLCNYVEK SLVENVLAIL
201: LVAFHCDLTQ LLDQCIERVA RSDLDRFYIE KELPLEVSEK IKKLRVKSMN TDEVADKLIE RTGKVLKALD SDDVELVKLL LTESDTTLDQ ANGLHYVVAY
301: SDPKVVAEVL ALDMADVNYR NSRGYTVLHY AAMRREPSII ISLLKKGANA SDFTFDGRSA VNICRRMTRP KDYYTKNAKG DEASKDRLCI DILEREIRRN
401: PLASGGGDAP TCSHSMPEDL QMRLLYLEKR VGLAQLFFPT EADVAMDIAN VEGTSEFTGF PVPPPSNGAT GNLTQVDLNE TPYMQTKRLL TRMEALMKTV
501: ETGRRYFPSC SEVLDKYMDD YMDEDIPDMS HPERGSVKER RWKRMRYKEL KNDVKKAYNK DKQAKIARSC LSVSSPDSSL RGSLENQT

Best Arabidopsis Sequence Match ( AT4G19660.1 )
(BLAST)

001: MAATAIEPSS SISFTSSHLS NPSPVVTTYH SAANLEELSS NLEQLLTNPD CDYTDAEIII EEEANPVSVH RCVLAARSKF FLDLFKKDKD SSEKKPKYQM
101: KDLLPYGNVG REAFLHFLSY IYTGRLKPFP IEVSTCVDSV CAHDSCKPAI DFAVELMYAS FVFQIPDLVS SFQRKLRNYV EKSLVENVLP ILLVAFHCDL
201: TQLLDQCIER VARSDLDRFC IEKELPLEVL EKIKQLRVKS VNIPEVEDKS IERTGKVLKA LDSDDVELVK LLLTESDITL DQANGLHYAV AYSDPKVVTQ
301: VLDLDMADVN FRNSRGYTVL HIAAMRREPT IIIPLIQKGA NASDFTFDGR SAVNICRRLT RPKDYHTKTS RKEPSKYRLC IDILEREIRR NPLVSGDTPT
401: CSHSMPEDLQ MRLLYLEKRV GLAQLFFPAE ANVAMDVANV EGTSECTGLL TPPPSNDTTE NLGKVDLNET PYVQTKRMLT RMKALMKTVE TGRRYFPSCY
501: EVLDKYMDQY MDEEIPDMSY PEKGTVKERR QKRMRYNELK NDVKKAYSKD KVARSCLSSS SPASSLREAL ENPT

Arabidopsis Description

NPR4NPR1-like protein 4 [Source:TAIR;Acc:AT4G19660]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.