Factsheet for Zm00001d012660_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 4
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d008225_P001
Zm00001d010658_P001
Zm00001d012553_P003
Zm00001d022542_P002
Zm00001d028936_P001
Zm00001d043153_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G45110.1	Zm00001d008225_P001	AT5G06960.1	21798944
AT5G45110.1	Zm00001d010658_P001	AT5G06960.1	21798944
AT5G45110.1	Zm00001d012553_P003	AT5G06960.1	21798944
AT5G45110.1	Zm00001d022542_P002	AT5G06960.1	21798944
AT5G45110.1	Zm00001d028936_P001	AT5G06960.1	21798944
AT5G45110.1	Zm00001d043153_P001	AT5G06960.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES01524	Sorghum	plastid	94.69	94.69
TraesCS3B01G337700.1	Wheat	plastid	77.94	79.47
TraesCS3D01G302900.1	Wheat	cytosol, plastid	77.46	79.24
Os01t0767900-01	Rice	plastid	81.0	79.21
TraesCS3A01G298800.1	Wheat	plastid	78.1	78.48
HORVU3Hr1G074640.4	Barley	cytosol, plastid	76.97	77.47
GSMUA_Achr5P02120_001	Banana	cytosol	65.22	69.35
GSMUA_Achr4P32060_001	Banana	cytosol, plastid	65.86	68.74
KRH36735	Soybean	cytosol, plastid	58.78	61.86
VIT_10s0042g01250.t01	Wine grape	cytosol, plastid	58.13	61.5
KRH11740	Soybean	plastid	57.81	60.85
PGSC0003DMT400054660	Potato	cytosol, plastid	53.62	57.31
Solyc02g069310.2.1	Tomato	cytosol, plastid	53.3	56.97
KRH73603	Soybean	cytosol, plastid	51.53	54.24
CDX78955	Canola	plastid	51.21	54.08
Bra013416.1-P	Field mustard	plastid	51.05	53.91
CDX99350	Canola	plastid	50.56	53.4
KRH14520	Soybean	cytosol, plastid	50.72	53.39
Zm00001d034944_P004	Maize	cytosol	38.97	53.19
CDY26398	Canola	plastid	47.5	52.49
Zm00001d013581_P001	Maize	cytosol	16.91	52.24
PGSC0003DMT400002412	Potato	cytosol	48.15	52.0
Solyc07g044980.2.1	Tomato	nucleus	47.83	51.83
AT5G45110.1	Thale cress	cytosol, plastid	48.79	51.71
Bra021949.1-P	Field mustard	plastid	46.7	51.6
CDX82577	Canola	plastid	44.93	51.48
CDY39410	Canola	plastid	45.25	51.47
Bra025093.1-P	Field mustard	plastid	45.25	51.47
AT4G19660.2	Thale cress	cytosol, plastid	49.76	51.41
Zm00001d039469_P001	Maize	cytosol	38.97	41.51
CDY36698	Canola	cytosol	33.17	40.47
Zm00001d052468_P002	Maize	cytosol	20.29	26.75
Zm00001d042111_P001	Maize	cytosol	21.74	26.57
Zm00001d004966_P001	Maize	cytosol	20.13	26.43
Zm00001d011878_P001	Maize	cytosol	20.77	26.33
Zm00001d023246_P001	Maize	cytosol	20.13	26.32

Protein Annotations

Gene3D:1.25.40.20	MapMan:11.8.2.1	Gene3D:3.30.710.10	ProteinID:AQL00163.1	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210
InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	UniProt:K7V8F5	InterPro:NPR1/NIM1-like_C	PFAM:PF00651
PFAM:PF12313	PFAM:PF12796	PFscan:PS50088	PFscan:PS50097	PFscan:PS50297	PANTHER:PTHR24413
PANTHER:PTHR24413:SF124	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF54695
UniParc:UPI00000343F0	EnsemblPlantsGene:Zm00001d012660	EnsemblPlants:Zm00001d012660_P002	EnsemblPlants:Zm00001d012660_T002	SEG:seg	:

Description

Regulatory protein NPR1

Coordinates

chr8:-:178109274..178113480

Molecular Weight (calculated)

67609.7 Da

IEP (calculated)

5.472

GRAVY (calculated)

-0.238

Length

621 amino acids

Sequence
(BLAST)

001: MEPSSSITFA SSSSYLSNGS SPCSVALPPP GPPQTPPLPA GQGWGGGVAA AGSGGSVEAV SLNRLSKNLE RLLLDPDLDC SDADVDVPDG GPPVPIHRCI
101: LAARSDFFYD LFAARGRAGA ARGDAAAGAG VAAEGAASGR PRYKMEDLVP AGRVGREAFQ AFLGYLYTGK LRPAPVDVVS CADPVCHHDS CPPAIRSAVE
201: LMYAACTFKI PELTSLFQRR LLNFVDKTLV EDVIPILEVA SHSGLTQVID KCIQRIARSD LDDISLDKEL PPEAVDEIKN LRKKSQTADG DTFISDPVHE
301: KRVRRIHRAL DSDDVELVKL LLNESDITLD DANALHYAAS YCDPKVVSEL LDLAMANLNL KNSRGYTALH LAAMRREPAI IMCLLNKGAN VSQLTADGRS
401: AIGICRRLTR AKDYNTKMEQ GQESNKDRLC IDILEREMMR NPMAVEDAVT SPLLADDLHM KLLYLENRVA FARLFFPAEA KVAMQIAQAD TTEEFGGIVA
501: VAASTSGKLR EVDLNETPVT QNKRLRSRVD ALMKTVELGR RYFPNCSQVL DKFLEDDLPE GLDQFYLQRG TADEQKVKRM RFCELKEDVL KAFSKDKAEG
601: SVFSGLSSSS SCSPPQKYAQ R

Best Arabidopsis Sequence Match ( AT5G45110.1 )
(BLAST)

001: MATLTEPSSS LSFTSSHFSY GSIGSNHFSS SSASNPEVVS LTKLSSNLEQ LLSNSDCDYS DAEIIVDGVP VGVHRCILAA RSKFFQDLFK KEKKISKTEK
101: PKYQLREMLP YGAVAHEAFL YFLSYIYTGR LKPFPLEVST CVDPVCSHDC CRPAIDFVVQ LMYASSVLQV PELVSSFQRR LCNFVEKTLV ENVLPILMVA
201: FNCKLTQLLD QCIERVARSD LYRFCIEKEV PPEVAEKIKQ LRLISPQDEE TSPKISEKLL ERIGKILKAL DSDDVELVKL LLTESDITLD QANGLHYSVV
301: YSDPKVVAEI LALDMGDVNY RNSRGYTVLH FAAMRREPSI IISLIDKGAN ASEFTSDGRS AVNILRRLTN PKDYHTKTAK GRESSKARLC IDILEREIRK
401: NPMVLDTPMC SISMPEDLQM RLLYLEKRVG LAQLFFPTEA KVAMDIGNVE GTSEFTGLSP PSSGLTGNLS QVDLNETPHM QTQRLLTRMV ALMKTVETGR
501: RFFPYGSEVL DKYMAEYIDD DILDDFHFEK GSTHERRLKR MRYRELKDDV QKAYSKDKES KIARSCLSAS SSPSSSSIRD DLHNTT

Arabidopsis Description

NPR3NPR3 [Source:UniProtKB/TrEMBL;Acc:A0A178UGU4]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.