Factsheet for Zm00001d004966_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d001952_P001
Zm00001d026536_P002

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G41370.1	Zm00001d001952_P001	AT3G51180.1	21798944
AT2G41370.1	Zm00001d026536_P002	AT3G51180.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d023246_P001	Maize	cytosol	89.01	88.63
Zm00001d052468_P002	Maize	cytosol	87.95	88.32
EES16520	Sorghum	cytosol	88.16	86.88
TraesCS5D01G139600.1	Wheat	cytosol	87.31	83.77
TraesCS5B01G133700.1	Wheat	cytosol	87.31	83.77
TraesCS5A01G134700.2	Wheat	cytosol	87.31	83.77
GSMUA_AchrUn_...	Banana	cytosol	53.7	60.62
GSMUA_Achr5P08160_001	Banana	cytosol	54.33	60.19
Zm00001d011878_P001	Maize	cytosol	61.95	59.8
GSMUA_Achr3P08710_001	Banana	cytosol	53.7	59.62
PGSC0003DMT400027591	Potato	cytosol	57.93	59.44
KRH72058	Soybean	cytosol	59.62	59.24
VIT_08s0007g05740.t01	Wine grape	cytosol	61.31	59.18
GSMUA_Achr8P22070_001	Banana	cytosol	51.37	58.55
Solyc04g040220.2.1	Tomato	cytosol	57.51	58.37
CDY23854	Canola	cytosol	59.2	58.21
CDY14765	Canola	cytosol, endoplasmic reticulum, plastid	59.41	57.7
CDY06929	Canola	cytosol, endoplasmic reticulum, plastid	59.41	57.7
Zm00001d042111_P001	Maize	cytosol	61.95	57.68
KRH66789	Soybean	cytosol	59.2	57.49
AT2G41370.1	Thale cress	cytosol	59.41	57.23
AT3G57130.1	Thale cress	cytosol	56.45	57.17
Bra016938.1-P	Field mustard	cytosol	58.56	56.88
Bra007306.1-P	Field mustard	cytosol	55.39	56.71
CDY06130	Canola	cytosol	55.18	56.49
CDX72067	Canola	cytosol	55.18	56.37
PGSC0003DMT400076710	Potato	cytosol	57.93	56.26
Solyc10g079750.1.1	Tomato	cytosol	57.93	56.15
CDY30971	Canola	cytosol	53.49	55.6
PGSC0003DMT400021076	Potato	cytosol	57.51	55.51
Bra003268.1-P	Field mustard	cytosol, endoplasmic reticulum, plastid	54.12	55.41
Bra004617.1-P	Field mustard	cytosol	37.0	55.2
CDX79940	Canola	cytosol	37.0	55.2
CDX67678	Canola	cytosol, endoplasmic reticulum, plastid	53.91	55.19
Solyc10g079460.1.1	Tomato	cytosol	57.51	55.06
GSMUA_AchrUn_...	Banana	cytosol	51.16	54.02
CDX76040	Canola	cytosol	32.77	53.26
Bra014645.1-P	Field mustard	cytosol	32.77	53.26
CDY35774	Canola	cytosol	32.56	52.92
Solyc05g018160.1.1	Tomato	cytosol	24.31	41.07
CDY33841	Canola	cytosol	7.61	36.36
Zm00001d034944_P004	Maize	cytosol	24.1	25.05
Zm00001d012660_P002	Maize	cytosol	26.43	20.13
Zm00001d039469_P001	Maize	cytosol	24.74	20.07
Zm00001d013581_P001	Maize	cytosol	1.69	3.98

Protein Annotations

Gene3D:1.25.40.20	MapMan:15.5.4.7.2	Gene3D:3.30.710.10	UniProt:A0A060CZD5	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210
InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	EMBL:KJ728425	ProteinID:ONM19864.1	PFAM:PF00651
PFAM:PF12796	PFscan:PS50088	PFscan:PS50097	PFscan:PS50297	PANTHER:PTHR24413	PANTHER:PTHR24413:SF113
InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF54695	UniParc:UPI000220F05C
EnsemblPlantsGene:Zm00001d004966	EnsemblPlants:Zm00001d004966_P001	EnsemblPlants:Zm00001d004966_T001	SEG:seg	:	:

Description

Regulatory protein NPR5

Coordinates

chr2:+:150962219..150965287

Molecular Weight (calculated)

49707.8 Da

IEP (calculated)

6.391

GRAVY (calculated)

0.129

Length

473 amino acids

Sequence
(BLAST)

001: MSSEDSVKSL SLDYLNLLIN GQAFSDVAFS VEGRLVHAHR CVLAARSLFF RKLFCGLDPN YQPPTPTLGS SSSGARAPEL VIPVSSIRYE VLVLVLQFLY
101: SGQASVAAPK SGPLPGCGAR GCWHTSCGAA VDLALDTLAA ARSFGVEQLA LLVQKQLEAM AKEASVDDVM KVLMASRKFE MQELWATCSH LVARSGLSAD
201: LLAKHLPIDV VAKIEEIRAA ANKSPVCAVS GGGGPRSPFL LTHHYLPVNG ASASASASEA ERDHRVRRMR RALDAADIEL VKLMVMGEGL DLDAALAVHY
301: AVQHCGRDVV KALLELGAAD VNSRAGPAGK TALHLAAEMV SPDMVSVLLD HHADPSARTL DGVTPLDVLR GLTSEFLFRG AVPGLTHIEP NKLRLCLELV
401: QSAVMVTTRD DDAGAGGGGS DAADDSLVSL TMNSTLMYQG QEMAAAVAGE ARKGSSGGGR GSPSNLYFPT AFP

Best Arabidopsis Sequence Match ( AT2G41370.1 )
(BLAST)

001: MSNLEESLRS LSLDFLNLLI NGQAFSDVTF SVEGRLVHAH RCILAARSLF FRKFFCGTDS PQPVTGIDPT QHGSVPASPT RGSTAPAGII PVNSVGYEVF
101: LLLLQFLYSG QVSIVPQKHE PRPNCGERGC WHTHCSAAVD LALDTLAASR YFGVEQLALL TQKQLASMVE KASIEDVMKV LIASRKQDMH QLWTTCSHLV
201: AKSGLPPEIL AKHLPIDVVT KIEELRLKSS IARRSLMPHN HHHDLSVAQD LEDQKIRRMR RALDSSDVEL VKLMVMGEGL NLDESLALHY AVESCSREVV
301: KALLELGAAD VNYPAGPAGK TPLHIAAEMV SPDMVAVLLD HHADPNVRTV GGITPLDILR TLTSDFLFKG AVPGLTHIEP NKLRLCLELV QSAAMVISRE
401: EGNNSNNQNN DNNTGIYPHM NEEHNSGSSG GSNNNLDSRL VYLNLGAGTG QMGPGRDQGD DHNSQREGMS RHHHHHQDPS TMYHHHHQHH F

Arabidopsis Description

NPR5Regulatory protein NPR5 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVC2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.