Factsheet for Zm00001d034944_P004

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d008225_P001
Zm00001d010658_P001
Zm00001d012553_P003
Zm00001d022542_P002
Zm00001d028936_P001
Zm00001d043153_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G45110.1	Zm00001d008225_P001	AT5G06960.1	21798944
AT5G45110.1	Zm00001d010658_P001	AT5G06960.1	21798944
AT5G45110.1	Zm00001d012553_P003	AT5G06960.1	21798944
AT5G45110.1	Zm00001d022542_P002	AT5G06960.1	21798944
AT5G45110.1	Zm00001d028936_P001	AT5G06960.1	21798944
AT5G45110.1	Zm00001d043153_P001	AT5G06960.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER91108	Sorghum	plastid	91.65	69.73
Os03t0667100-01	Rice	cytosol	75.6	58.4
TraesCS4A01G294400.1	Wheat	cytosol, plastid	73.19	55.41
TraesCS4D01G017500.1	Wheat	cytosol	72.09	55.03
TraesCS4B01G018900.2	Wheat	cytosol, plastid	72.53	54.91
HORVU4Hr1G003040.1	Barley	cytosol, plastid	70.99	54.84
GSMUA_Achr5P02120_001	Banana	cytosol	53.19	41.44
GSMUA_Achr4P32060_001	Banana	cytosol, plastid	53.41	40.84
Zm00001d013581_P001	Maize	cytosol	17.36	39.3
Zm00001d012660_P002	Maize	cytosol	53.19	38.97
VIT_10s0042g01250.t01	Wine grape	cytosol, plastid	49.89	38.67
KRH36735	Soybean	cytosol, plastid	49.23	37.97
KRH11740	Soybean	plastid	49.01	37.8
PGSC0003DMT400054660	Potato	cytosol, plastid	47.69	37.35
CDY26398	Canola	plastid	45.93	37.19
Solyc02g069310.2.1	Tomato	cytosol, plastid	47.03	36.83
Bra021949.1-P	Field mustard	plastid	45.27	36.65
CDX78955	Canola	plastid	46.37	35.88
PGSC0003DMT400002412	Potato	cytosol	45.27	35.83
CDX99350	Canola	plastid	45.93	35.54
Bra013416.1-P	Field mustard	plastid	45.93	35.54
Solyc07g044980.2.1	Tomato	nucleus	44.62	35.43
AT5G45110.1	Thale cress	cytosol, plastid	45.27	35.15
KRH73603	Soybean	cytosol, plastid	45.49	35.08
KRH14520	Soybean	cytosol, plastid	45.49	35.08
CDY39410	Canola	plastid	41.98	34.98
Bra025093.1-P	Field mustard	plastid	41.98	34.98
CDX82577	Canola	plastid	41.32	34.69
AT4G19660.2	Thale cress	cytosol, plastid	45.49	34.44
Zm00001d039469_P001	Maize	cytosol	38.68	30.19
CDY36698	Canola	cytosol	30.77	27.5
Zm00001d004966_P001	Maize	cytosol	25.05	24.1
Zm00001d023246_P001	Maize	cytosol	25.05	24.0
Zm00001d052468_P002	Maize	cytosol	24.84	23.99
Zm00001d011878_P001	Maize	cytosol	24.84	23.06
Zm00001d042111_P001	Maize	cytosol	24.84	22.24

Protein Annotations

Gene3D:1.25.40.20	EntrezGene:100384298	Gene3D:3.30.710.10	MapMan:35.1	UniProt:A0A1D6LCY0	InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000210	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	InterPro:NPR1/NIM1-like_C	InterPro:NPR_central_dom
ProteinID:ONM11882.1	PFAM:PF11900	PFAM:PF12313	PFAM:PF12796	PFscan:PS50088	PFscan:PS50097
PFscan:PS50297	PANTHER:PTHR24413	PANTHER:PTHR24413:SF114	InterPro:SKP1/BTB/POZ_sf	SMART:SM00248	SUPFAM:SSF48403
SUPFAM:SSF54695	UniParc:UPI0008424CE4	EnsemblPlantsGene:Zm00001d034944	EnsemblPlants:Zm00001d034944_P004	EnsemblPlants:Zm00001d034944_T004	SEG:seg

Description

Regulatory protein NPR3

Coordinates

chr1:+:306360107..306362992

Molecular Weight (calculated)

50249.2 Da

IEP (calculated)

6.083

GRAVY (calculated)

-0.197

Length

455 amino acids

Sequence
(BLAST)

001: MEVSTISFSS PPPRATPADL EAVGLRRLSD NLQRLLDPAF LNCSDAEIAL AAARGGGAVG VHRCILAARS AFFLDHLASL PAPAAAGERP RLELADLVPG
101: GRHIGRDALV PVLGYLYTGR LKPPAQDATV CMDDACGHGT CRPAIDFVVE SMYAASGFQI SELASLFQRR LSDFVCEALD EDVVPIIHVA STCDLQDLLN
201: LCIQRVAVSA LDSRYLDKEL PADIYNKIKE IRRQPENAII LDPEHDKRVR NILKALDSDD VDLVGLLLKE STVTLDDAFA IHYAAAYCEP KVFAELLKLD
301: SANVNLKNSG GYTPLHIACM RREPDIILSL VERGACVLER TLDGRDALTI CKRLTREKDC NRKLDKYEEK IELGRRYFPH CSDVLDKFLN EESTDPIFLE
401: TGTPEDQQVK RMRFSELRED VRKAFTKDKA AVAAIASSAS SSSSPRCRRP NRKSR

Best Arabidopsis Sequence Match ( AT4G19660.2 )
(BLAST)

001: MAATAIEPSS SISFTSSHLS NPSPVVTTYH SAANLEELSS NLEQLLTNPD CDYTDAEIII EEEANPVSVH RCVLAARSKF FLDLFKKDKD SSEKKPKYQM
101: KDLLPYGNVG REAFLHFLSY IYTGRLKPFP IEVSTCVDSV CAHDSCKPAI DFAVELMYAS FVFQIPDLVS SFQRKLRNYV EKSLVENVLP ILLVAFHCDL
201: TQLLDQCIER VARSDLDRFC IEKELPLEVL EKIKQLRVKS VNIPEVEDKS IERTGKVLKA LDSDDVELVK LLLTESDITL DQANGLHYAV AYSDPKVVTQ
301: VLDLDMADVN FRNSRGYTVL HIAAMRREPT IIIPLIQKGA NASDFTFDGR SAVNICRRLT RPKDYHTKTS RKEPSKYRLC IDILEREIRR NPLVSGDTPT
401: CSHSMPEDLQ MRLLYLEKRV GLAQLFFPAE ANVAMDVANV EGTSECTGLL TPPPSNDTTE NLGKVDLNET PYVQTKRMLT RMKALMKTGK SLRKCTFKFY
501: SLTTRLTDSK PFNNAVETGR RYFPSCYEVL DKYMDQYMDE EIPDMSYPEK GTVKERRQKR MRYNELKNDV KKAYSKDKVA RSCLSSSSPA SSLREALENP
601: T

Arabidopsis Description

NPR4NPR1-like protein 4 [Source:TAIR;Acc:AT4G19660]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.