CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 3
plastid 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH14520	Soybean	cytosol, plastid	94.24	94.24
KRH11740	Soybean	plastid	63.05	63.05
KRH36735	Soybean	cytosol, plastid	62.88	62.88
Solyc07g044980.2.1	Tomato	nucleus	56.61	58.29
PGSC0003DMT400002412	Potato	cytosol	56.78	58.26
GSMUA_Achr5P02120_001	Banana	cytosol	57.46	58.05
GSMUA_Achr4P32060_001	Banana	cytosol, plastid	58.31	57.82
Zm00001d012660_P002	Maize	cytosol	54.24	51.53
EES01524	Sorghum	plastid	54.07	51.37
TraesCS3D01G302900.1	Wheat	cytosol, plastid	51.69	50.25
TraesCS3B01G337700.1	Wheat	plastid	51.86	50.25
HORVU3Hr1G074640.4	Barley	cytosol, plastid	52.2	49.92
TraesCS3A01G298800.1	Wheat	plastid	52.03	49.68
Os01t0767900-01	Rice	plastid	53.39	49.61
Zm00001d034944_P004	Maize	cytosol	35.08	45.49
Os03t0667100-01	Rice	cytosol	44.92	44.99
Zm00001d013581_P001	Maize	cytosol	15.25	44.78
EER91108	Sorghum	plastid	45.25	44.65
TraesCS4D01G017500.1	Wheat	cytosol	44.41	43.96
TraesCS4B01G018900.2	Wheat	cytosol, plastid	44.75	43.93
HORVU4Hr1G003040.1	Barley	cytosol, plastid	43.56	43.63
TraesCS4A01G294400.1	Wheat	cytosol, plastid	44.41	43.59
KRH37416	Soybean	cytosol	38.14	38.66
KRG95113	Soybean	cytosol	19.49	33.05
KRH66789	Soybean	cytosol	23.9	28.95
KRH72058	Soybean	cytosol	23.22	28.78

Protein Annotations

Gene3D:1.25.40.20	EntrezGene:100816582	MapMan:11.8.2.1	Gene3D:3.30.710.10	EMBL:ACUP02001285	InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	InterPro:BTB/POZ_dom	EnsemblPlantsGene:GLYMA_02G283300	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0019005	GO:GO:0019538
GO:GO:0030162	GO:GO:0031625	GO:GO:0042787	GO:GO:0043161	UniProt:I1JJ13	InterPro:IPR000210
InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	EnsemblPlants:KRH73603	ProteinID:KRH73603	ProteinID:KRH73603.1
ProteinID:KRH73604.1	ProteinID:KRH73605.1	InterPro:NPR1/NIM1-like_C	InterPro:NPR_central_dom	PFAM:PF00651	PFAM:PF11900
PFAM:PF12313	PFAM:PF13637	PFscan:PS50088	PFscan:PS50097	PFscan:PS50297	PANTHER:PTHR24413
PANTHER:PTHR24413:SF78	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF54695
UniParc:UPI000233724A	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:46512471..46517039

Molecular Weight (calculated)

66554.0 Da

IEP (calculated)

6.151

GRAVY (calculated)

-0.388

Length

590 amino acids

Sequence
(BLAST)

001: MDNSNDSSSS LSFVSSRLSH GSSNHNVSSS TSNEHGANIE ILSLNKLSGS LEKLLIETEY DYSDAEILVE DIPVGIHRCI LASRSLFFHE LFKKGTDGSG
101: KEGKPRYLMS DLVPYGTVGY EAFQVFLYYL YTGRLKASPT EVTTCVDETC THDACRPAIN YALELMYASA TFQMKELVLL FQRHLLNFVE KALVEDVIPI
201: LMAAFNCQLD QLLSQCIRRV ARSDFDNTSL EKELPREVVT EIKLLRLPFQ PESTPNAMEV ESLNEKSIRR IHKALDSDDV ELLKLLLNES SVTLDDAHAL
301: HYACAYSDSK VIQEVLSLGM ADILRRNSRG YTVLHVAARR KDPSILVALL NKGACASDTT PDGQTALAIC QRLTRYKDYQ EQTVQCKESN KDRLCVDVLE
401: REMRRNSMTV NMSVSSQLTA NDLHMRLDYL EDRVAFARLF FPAEARVAIE NAEADSSSMY ANSSALKGTN GNLKQVDLNE SPSAHTRKLQ LRLHALMKTV
501: ENGRRFFPHC SEVLDKFLED DDMPDVFFLE KGSEDEQRIK KARFMELKDD VQKAFHKDMA ENNHSGFSST VSSSSSSTRR EGLNHRVRRK

Best Arabidopsis Sequence Match ( AT5G45110.1 )
(BLAST)

001: MATLTEPSSS LSFTSSHFSY GSIGSNHFSS SSASNPEVVS LTKLSSNLEQ LLSNSDCDYS DAEIIVDGVP VGVHRCILAA RSKFFQDLFK KEKKISKTEK
101: PKYQLREMLP YGAVAHEAFL YFLSYIYTGR LKPFPLEVST CVDPVCSHDC CRPAIDFVVQ LMYASSVLQV PELVSSFQRR LCNFVEKTLV ENVLPILMVA
201: FNCKLTQLLD QCIERVARSD LYRFCIEKEV PPEVAEKIKQ LRLISPQDEE TSPKISEKLL ERIGKILKAL DSDDVELVKL LLTESDITLD QANGLHYSVV
301: YSDPKVVAEI LALDMGDVNY RNSRGYTVLH FAAMRREPSI IISLIDKGAN ASEFTSDGRS AVNILRRLTN PKDYHTKTAK GRESSKARLC IDILEREIRK
401: NPMVLDTPMC SISMPEDLQM RLLYLEKRVG LAQLFFPTEA KVAMDIGNVE GTSEFTGLSP PSSGLTGNLS QVDLNETPHM QTQRLLTRMV ALMKTVETGR
501: RFFPYGSEVL DKYMAEYIDD DILDDFHFEK GSTHERRLKR MRYRELKDDV QKAYSKDKES KIARSCLSAS SSPSSSSIRD DLHNTT

Arabidopsis Description

NPR3NPR3 [Source:UniProtKB/TrEMBL;Acc:A0A178UGU4]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.