Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER91108 | Sorghum | plastid | 90.05 | 30.27 |
| TraesCS4D01G017500.1 | Wheat | cytosol | 78.11 | 26.34 |
| Os03t0667100-01 | Rice | cytosol | 77.11 | 26.32 |
| HORVU4Hr1G003040.1 | Barley | cytosol, plastid | 76.62 | 26.15 |
| TraesCS4A01G294400.1 | Wheat | cytosol, plastid | 78.11 | 26.12 |
| TraesCS4B01G018900.2 | Wheat | cytosol, plastid | 77.61 | 25.96 |
| GSMUA_Achr5P02120_001 | Banana | cytosol | 51.74 | 17.81 |
| VIT_10s0042g01250.t01 | Wine grape | cytosol, plastid | 50.75 | 17.38 |
| Zm00001d034944_P004 | Maize | cytosol | 39.3 | 17.36 |
| GSMUA_Achr4P32060_001 | Banana | cytosol, plastid | 51.24 | 17.31 |
| Zm00001d012660_P002 | Maize | cytosol | 52.24 | 16.91 |
| KRH36735 | Soybean | cytosol, plastid | 49.25 | 16.78 |
| KRH11740 | Soybean | plastid | 47.76 | 16.27 |
| CDX82577 | Canola | plastid | 43.28 | 16.05 |
| PGSC0003DMT400054660 | Potato | cytosol, plastid | 45.77 | 15.83 |
| CDY39410 | Canola | plastid | 42.79 | 15.75 |
| Bra025093.1-P | Field mustard | plastid | 42.79 | 15.75 |
| Solyc02g069310.2.1 | Tomato | cytosol, plastid | 45.27 | 15.66 |
| KRH14520 | Soybean | cytosol, plastid | 44.78 | 15.25 |
| KRH73603 | Soybean | cytosol, plastid | 44.78 | 15.25 |
| PGSC0003DMT400002412 | Potato | cytosol | 42.29 | 14.78 |
| Solyc07g044980.2.1 | Tomato | nucleus | 41.79 | 14.66 |
| Bra021949.1-P | Field mustard | plastid | 39.8 | 14.23 |
| CDY26398 | Canola | plastid | 39.3 | 14.06 |
| AT5G45110.1 | Thale cress | cytosol, plastid | 40.8 | 13.99 |
| CDY36698 | Canola | cytosol | 35.32 | 13.95 |
| CDX78955 | Canola | plastid | 40.8 | 13.95 |
| CDX99350 | Canola | plastid | 40.3 | 13.78 |
| Bra013416.1-P | Field mustard | plastid | 40.3 | 13.78 |
| AT4G19660.2 | Thale cress | cytosol, plastid | 39.3 | 13.14 |
| Zm00001d039469_P001 | Maize | cytosol | 31.84 | 10.98 |
| Zm00001d042111_P001 | Maize | cytosol | 4.98 | 1.97 |
| Zm00001d052468_P002 | Maize | cytosol | 4.48 | 1.91 |
| Zm00001d023246_P001 | Maize | cytosol | 4.48 | 1.89 |
| Zm00001d011878_P001 | Maize | cytosol | 4.48 | 1.84 |
| Zm00001d004966_P001 | Maize | cytosol | 3.98 | 1.69 |
Protein Annotations
| EnsemblPlants:Zm00001d013581_P001 | EnsemblPlants:Zm00001d013581_T001 | EnsemblPlantsGene:Zm00001d013581 | InterPro:NPR1/NIM1-like_C | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF114 |
| PFAM:PF12313 | ProteinID:AQK63888.1 | SEG:seg | UniParc:UPI0008424DA8 | UniProt:A0A1D6GKM9 | MapMan:35.1 |
Description
Regulatory protein NPR3
Coordinates
chr5:+:14829483..14830919
Molecular Weight (calculated)
22848.4 Da
IEP (calculated)
9.958
GRAVY (calculated)
-0.396
Length
201 amino acids
Sequence
(BLAST)
(BLAST)
001: MFGSAEVILT GSVKRKSFVF DPISIEELIA TPLLIHNFHM RLINLENRVA FARIFFPSEA KIVMRIAQAD STEEFVGITN FSKLKEVDLN ETPTMQNTRL
101: RERLDALTKT VELGRRYFPH CSDVLDKFLN EESTDLIFLE TGSPEDQRLK RMRFSELKED VRKAFTKDKA AVAAIASSAS SSSSPRCEGR GRSNKRSRPS
201: R
101: RERLDALTKT VELGRRYFPH CSDVLDKFLN EESTDLIFLE TGSPEDQRLK RMRFSELKED VRKAFTKDKA AVAAIASSAS SSSSPRCEGR GRSNKRSRPS
201: R
001: MATLTEPSSS LSFTSSHFSY GSIGSNHFSS SSASNPEVVS LTKLSSNLEQ LLSNSDCDYS DAEIIVDGVP VGVHRCILAA RSKFFQDLFK KEKKISKTEK
101: PKYQLREMLP YGAVAHEAFL YFLSYIYTGR LKPFPLEVST CVDPVCSHDC CRPAIDFVVQ LMYASSVLQV PELVSSFQRR LCNFVEKTLV ENVLPILMVA
201: FNCKLTQLLD QCIERVARSD LYRFCIEKEV PPEVAEKIKQ LRLISPQDEE TSPKISEKLL ERIGKILKAL DSDDVELVKL LLTESDITLD QANGLHYSVV
301: YSDPKVVAEI LALDMGDVNY RNSRGYTVLH FAAMRREPSI IISLIDKGAN ASEFTSDGRS AVNILRRLTN PKDYHTKTAK GRESSKARLC IDILEREIRK
401: NPMVLDTPMC SISMPEDLQM RLLYLEKRVG LAQLFFPTEA KVAMDIGNVE GTSEFTGLSP PSSGLTGNLS QVDLNETPHM QTQRLLTRMV ALMKTVETGR
501: RFFPYGSEVL DKYMAEYIDD DILDDFHFEK GSTHERRLKR MRYRELKDDV QKAYSKDKES KIARSCLSAS SSPSSSSIRD DLHNTT
101: PKYQLREMLP YGAVAHEAFL YFLSYIYTGR LKPFPLEVST CVDPVCSHDC CRPAIDFVVQ LMYASSVLQV PELVSSFQRR LCNFVEKTLV ENVLPILMVA
201: FNCKLTQLLD QCIERVARSD LYRFCIEKEV PPEVAEKIKQ LRLISPQDEE TSPKISEKLL ERIGKILKAL DSDDVELVKL LLTESDITLD QANGLHYSVV
301: YSDPKVVAEI LALDMGDVNY RNSRGYTVLH FAAMRREPSI IISLIDKGAN ASEFTSDGRS AVNILRRLTN PKDYHTKTAK GRESSKARLC IDILEREIRK
401: NPMVLDTPMC SISMPEDLQM RLLYLEKRVG LAQLFFPTEA KVAMDIGNVE GTSEFTGLSP PSSGLTGNLS QVDLNETPHM QTQRLLTRMV ALMKTVETGR
501: RFFPYGSEVL DKYMAEYIDD DILDDFHFEK GSTHERRLKR MRYRELKDDV QKAYSKDKES KIARSCLSAS SSPSSSSIRD DLHNTT
Arabidopsis Description
NPR3NPR3 [Source:UniProtKB/TrEMBL;Acc:A0A178UGU4]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.