Factsheet for Bra025093.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 5
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra028713.1-P
Bra032601.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G45110.1	Bra032601.1-P	AT1G02450.1	21798944
AT5G45110.1	Bra028713.1-P	AT5G06960.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY39410	Canola	plastid	99.45	99.45
Bra021949.1-P	Field mustard	plastid	87.0	84.52
AT5G45110.1	Thale cress	cytosol, plastid	86.26	80.38
Bra013416.1-P	Field mustard	plastid	73.63	68.37
KRH36735	Soybean	cytosol, plastid	62.45	57.8
VIT_10s0042g01250.t01	Wine grape	cytosol, plastid	61.36	57.07
KRH11740	Soybean	plastid	60.99	56.44
Solyc02g069310.2.1	Tomato	cytosol, plastid	56.04	52.67
PGSC0003DMT400054660	Potato	cytosol, plastid	56.04	52.67
GSMUA_Achr5P02120_001	Banana	cytosol	55.49	51.88
GSMUA_Achr4P32060_001	Banana	cytosol, plastid	53.66	49.24
EES01524	Sorghum	plastid	51.83	45.57
Zm00001d012660_P002	Maize	cytosol	51.47	45.25
TraesCS3B01G337700.1	Wheat	plastid	50.37	45.16
TraesCS3D01G302900.1	Wheat	cytosol, plastid	50.18	45.14
HORVU3Hr1G074640.4	Barley	cytosol, plastid	50.37	44.57
TraesCS3A01G298800.1	Wheat	plastid	50.37	44.5
Os01t0767900-01	Rice	plastid	51.65	44.41
Zm00001d013581_P001	Maize	cytosol	15.75	42.79
Zm00001d034944_P004	Maize	cytosol	34.98	41.98
EER91108	Sorghum	plastid	45.6	41.64
Os03t0667100-01	Rice	cytosol	44.51	41.26
TraesCS4D01G017500.1	Wheat	cytosol	43.77	40.1
TraesCS4A01G294400.1	Wheat	cytosol, plastid	44.14	40.1
TraesCS4B01G018900.2	Wheat	cytosol, plastid	44.14	40.1
HORVU4Hr1G003040.1	Barley	cytosol, plastid	43.22	40.07
Bra027690.1-P	Field mustard	cytosol, plastid	37.0	35.44
Bra013950.1-P	Field mustard	cytosol	35.35	33.33
Bra013952.1-P	Field mustard	cytosol	36.08	32.56
Bra004618.1-P	Field mustard	cytosol	8.42	25.27
Bra007306.1-P	Field mustard	cytosol	20.7	24.46
Bra016938.1-P	Field mustard	cytosol	21.06	23.61
Bra003268.1-P	Field mustard	cytosol, endoplasmic reticulum, plastid	19.96	23.59
Bra014645.1-P	Field mustard	cytosol	12.27	23.02
Bra004617.1-P	Field mustard	cytosol	13.19	22.71
Bra010439.1-P	Field mustard	cytosol	35.53	20.17

Protein Annotations

Gene3D:1.25.40.20	Gene3D:3.30.710.10	MapMan:35.1	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf
InterPro:BTB/POZ_dom	EnsemblPlantsGene:Bra025093	EnsemblPlants:Bra025093.1	EnsemblPlants:Bra025093.1-P	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	UniProt:M4E8I7
InterPro:NPR1/NIM1-like_C	InterPro:NPR_central_dom	PFAM:PF00651	PFAM:PF11900	PFAM:PF12313	PFscan:PS50088
PFscan:PS50097	PFscan:PS50297	PANTHER:PTHR24413	PANTHER:PTHR24413:SF124	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225
SUPFAM:SSF48403	SUPFAM:SSF54695	UniParc:UPI000253F5C2	SEG:seg	:	:

Description

AT5G45110 (E=8e-118) NPR3 | NPR3 (NPR1-LIKE PROTEIN 3); protein binding

Coordinates

chrA06:-:25116969..25118958

Molecular Weight (calculated)

61239.8 Da

IEP (calculated)

7.568

GRAVY (calculated)

-0.278

Length

546 amino acids

Sequence
(BLAST)

001: MATLTEPSSS LSFTSSHFSN VSVGSNHFSP SSASNLEVVS LSKLSSNLEQ LLSSNPDCDY TDAEIIVDGV PVGVHRCILS ARSKFFQELF KKDKKSCKIE
101: KPKYHLKEVL PYGAVGHEAF VYFLSYIYTG RLKPFPLEVS TCVDSVCAHD SCRPAIDFVV ELMYAASILQ VPELVSSFLR RLCNFVEKSL VENVLPILLV
201: AFNCKLTQLL DQCIERVARS DLYRFCIEKE VPLEVAEKIK QIRLKSPQEE EENSPKVSDK ILKALDSDDV ELVKLLLTEN SRGYTVLHLA AMRKEPSIII
301: SLLKRGANAS GFTCDGRSAV NICRRLTTPK DYHTKTAAKG REASKARLCI DLLEREVRRN PMVVDSPMCS LSMPEDLQMR LLYLEKRVGL AQLFFPTEAK
401: VAMDIANVEG TSEFTGLPPP SNGLTGNLSQ VDLNETPHMQ TKRLLTRMEA LMKTVETGRR YFPYGSGVLD KYMEEYIDDD ILDDLQIEKG SPQERRLKRM
501: RYRELKDDVQ KAYSKDKESK IARSCLSASS SPSSSSSLRD GLKNST

Best Arabidopsis Sequence Match ( AT5G45110.1 )
(BLAST)

001: MATLTEPSSS LSFTSSHFSY GSIGSNHFSS SSASNPEVVS LTKLSSNLEQ LLSNSDCDYS DAEIIVDGVP VGVHRCILAA RSKFFQDLFK KEKKISKTEK
101: PKYQLREMLP YGAVAHEAFL YFLSYIYTGR LKPFPLEVST CVDPVCSHDC CRPAIDFVVQ LMYASSVLQV PELVSSFQRR LCNFVEKTLV ENVLPILMVA
201: FNCKLTQLLD QCIERVARSD LYRFCIEKEV PPEVAEKIKQ LRLISPQDEE TSPKISEKLL ERIGKILKAL DSDDVELVKL LLTESDITLD QANGLHYSVV
301: YSDPKVVAEI LALDMGDVNY RNSRGYTVLH FAAMRREPSI IISLIDKGAN ASEFTSDGRS AVNILRRLTN PKDYHTKTAK GRESSKARLC IDILEREIRK
401: NPMVLDTPMC SISMPEDLQM RLLYLEKRVG LAQLFFPTEA KVAMDIGNVE GTSEFTGLSP PSSGLTGNLS QVDLNETPHM QTQRLLTRMV ALMKTVETGR
501: RFFPYGSEVL DKYMAEYIDD DILDDFHFEK GSTHERRLKR MRYRELKDDV QKAYSKDKES KIARSCLSAS SSPSSSSIRD DLHNTT

Arabidopsis Description

NPR3NPR3 [Source:UniProtKB/TrEMBL;Acc:A0A178UGU4]
SUBAcon: [cytosol,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.