Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 2
- nucleus 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS3B01G337700.1 | Wheat | plastid | 97.53 | 97.21 |
TraesCS3A01G298800.1 | Wheat | plastid | 97.86 | 96.12 |
HORVU3Hr1G074640.4 | Barley | cytosol, plastid | 94.07 | 92.54 |
Zm00001d012660_P002 | Maize | cytosol | 79.24 | 77.46 |
EES01524 | Sorghum | plastid | 79.08 | 77.29 |
Os01t0767900-01 | Rice | plastid | 80.4 | 76.85 |
GSMUA_Achr5P02120_001 | Banana | cytosol | 62.44 | 64.9 |
GSMUA_Achr4P32060_001 | Banana | cytosol, plastid | 63.43 | 64.71 |
VIT_10s0042g01250.t01 | Wine grape | cytosol, plastid | 57.33 | 59.28 |
KRH36735 | Soybean | cytosol, plastid | 56.67 | 58.31 |
KRH11740 | Soybean | plastid | 55.85 | 57.46 |
PGSC0003DMT400054660 | Potato | cytosol, plastid | 53.38 | 55.77 |
Solyc02g069310.2.1 | Tomato | cytosol, plastid | 52.72 | 55.08 |
KRH73603 | Soybean | cytosol, plastid | 50.25 | 51.69 |
KRH14520 | Soybean | cytosol, plastid | 49.75 | 51.19 |
CDY26398 | Canola | plastid | 47.12 | 50.89 |
PGSC0003DMT400002412 | Potato | cytosol | 47.94 | 50.61 |
CDX82577 | Canola | plastid | 45.14 | 50.55 |
Bra013416.1-P | Field mustard | plastid | 48.93 | 50.51 |
CDX78955 | Canola | plastid | 48.93 | 50.51 |
CDY39410 | Canola | plastid | 45.3 | 50.37 |
CDX99350 | Canola | plastid | 48.76 | 50.34 |
Solyc07g044980.2.1 | Tomato | nucleus | 47.45 | 50.26 |
Bra025093.1-P | Field mustard | plastid | 45.14 | 50.18 |
Bra021949.1-P | Field mustard | plastid | 46.29 | 50.0 |
AT5G45110.1 | Thale cress | cytosol, plastid | 48.11 | 49.83 |
TraesCS4D01G017500.1 | Wheat | cytosol | 48.6 | 49.5 |
AT4G19660.2 | Thale cress | cytosol, plastid | 48.27 | 48.75 |
CDY36698 | Canola | cytosol | 32.95 | 39.29 |
TraesCS7D01G019000.1 | Wheat | cytosol, mitochondrion | 31.47 | 39.22 |
TraesCS3D01G107500.1 | Wheat | cytosol | 37.4 | 39.14 |
TraesCS3D01G484100.1 | Wheat | cytosol | 20.76 | 24.66 |
TraesCS5D01G139600.1 | Wheat | cytosol | 19.93 | 24.54 |
Protein Annotations
Gene3D:1.25.40.20 | MapMan:11.8.2.1 | Gene3D:3.30.710.10 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf |
InterPro:BTB/POZ_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR000210 | InterPro:IPR002110 |
InterPro:IPR020683 | InterPro:IPR036770 | InterPro:NPR1/NIM1-like_C | PFAM:PF00651 | PFAM:PF12313 | PFAM:PF12796 |
PFscan:PS50088 | PFscan:PS50097 | PFscan:PS50297 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF124 | InterPro:SKP1/BTB/POZ_sf |
SMART:SM00225 | SMART:SM00248 | SUPFAM:SSF48403 | SUPFAM:SSF54695 | EnsemblPlantsGene:TraesCS3D01G302900 | EnsemblPlants:TraesCS3D01G302900.1 |
TIGR:cd00204 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr3D:+:417738448..417741266
Molecular Weight (calculated)
66313.2 Da
IEP (calculated)
5.347
GRAVY (calculated)
-0.232
Length
607 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPSSSITVA SSSSYLSNGS SPCSGALAPL PAADGWGGAG GGGGSSSSVE AVSLSRLSSN LERLLLDSEL DCSDADVDVA DGGPPIPIHR CILAARSPFF
101: HDLFRARGSR SDGAVTASAS ATSGGAGGDV TGRPQYKMED LVPGGRVGRE AFLAFMGYLY TGRLRPAPLD VVSCADLVCP HDSCPPAIRF AVELMYAAWT
201: FRIPELMSLF QRRLMNFVDK TLAEDVLPIL QVAFHSELTQ VREKCVQRIA RSDLDIMSLD KELLPEIADE IKRIRQKSPP IDGDTIISDP IHEKRVRRIH
301: RALDSDDVEL VKLLLNESEI TLDDANALHY AAAYCDSKVL TELLGLELAN LNLKNSRGYT ALHLAAMRRE PAIIMCLLSK GAVASQLTDD GRLASNICRR
401: LTRLKDYNAK MEQGQESNKD RMCIDILERE MMRNPMTAED SVTSPLLADD LHMKLSYLEN RVAFARLFFP AEAKVAMQIA QADITPEVGG FSAASTSGKL
501: REVDLNETPV TKNKRLRSRV DALVKTVELG RRYFPNCSQV LDKFLEDGLP DGLDAFQQQS GTPDEQQVKK MRFCEVKEDV RKAYSKDTAD NSMFSALSSN
601: SSSSAMK
101: HDLFRARGSR SDGAVTASAS ATSGGAGGDV TGRPQYKMED LVPGGRVGRE AFLAFMGYLY TGRLRPAPLD VVSCADLVCP HDSCPPAIRF AVELMYAAWT
201: FRIPELMSLF QRRLMNFVDK TLAEDVLPIL QVAFHSELTQ VREKCVQRIA RSDLDIMSLD KELLPEIADE IKRIRQKSPP IDGDTIISDP IHEKRVRRIH
301: RALDSDDVEL VKLLLNESEI TLDDANALHY AAAYCDSKVL TELLGLELAN LNLKNSRGYT ALHLAAMRRE PAIIMCLLSK GAVASQLTDD GRLASNICRR
401: LTRLKDYNAK MEQGQESNKD RMCIDILERE MMRNPMTAED SVTSPLLADD LHMKLSYLEN RVAFARLFFP AEAKVAMQIA QADITPEVGG FSAASTSGKL
501: REVDLNETPV TKNKRLRSRV DALVKTVELG RRYFPNCSQV LDKFLEDGLP DGLDAFQQQS GTPDEQQVKK MRFCEVKEDV RKAYSKDTAD NSMFSALSSN
601: SSSSAMK
001: MATLTEPSSS LSFTSSHFSY GSIGSNHFSS SSASNPEVVS LTKLSSNLEQ LLSNSDCDYS DAEIIVDGVP VGVHRCILAA RSKFFQDLFK KEKKISKTEK
101: PKYQLREMLP YGAVAHEAFL YFLSYIYTGR LKPFPLEVST CVDPVCSHDC CRPAIDFVVQ LMYASSVLQV PELVSSFQRR LCNFVEKTLV ENVLPILMVA
201: FNCKLTQLLD QCIERVARSD LYRFCIEKEV PPEVAEKIKQ LRLISPQDEE TSPKISEKLL ERIGKILKAL DSDDVELVKL LLTESDITLD QANGLHYSVV
301: YSDPKVVAEI LALDMGDVNY RNSRGYTVLH FAAMRREPSI IISLIDKGAN ASEFTSDGRS AVNILRRLTN PKDYHTKTAK GRESSKARLC IDILEREIRK
401: NPMVLDTPMC SISMPEDLQM RLLYLEKRVG LAQLFFPTEA KVAMDIGNVE GTSEFTGLSP PSSGLTGNLS QVDLNETPHM QTQRLLTRMV ALMKTVETGR
501: RFFPYGSEVL DKYMAEYIDD DILDDFHFEK GSTHERRLKR MRYRELKDDV QKAYSKDKES KIARSCLSAS SSPSSSSIRD DLHNTT
101: PKYQLREMLP YGAVAHEAFL YFLSYIYTGR LKPFPLEVST CVDPVCSHDC CRPAIDFVVQ LMYASSVLQV PELVSSFQRR LCNFVEKTLV ENVLPILMVA
201: FNCKLTQLLD QCIERVARSD LYRFCIEKEV PPEVAEKIKQ LRLISPQDEE TSPKISEKLL ERIGKILKAL DSDDVELVKL LLTESDITLD QANGLHYSVV
301: YSDPKVVAEI LALDMGDVNY RNSRGYTVLH FAAMRREPSI IISLIDKGAN ASEFTSDGRS AVNILRRLTN PKDYHTKTAK GRESSKARLC IDILEREIRK
401: NPMVLDTPMC SISMPEDLQM RLLYLEKRVG LAQLFFPTEA KVAMDIGNVE GTSEFTGLSP PSSGLTGNLS QVDLNETPHM QTQRLLTRMV ALMKTVETGR
501: RFFPYGSEVL DKYMAEYIDD DILDDFHFEK GSTHERRLKR MRYRELKDDV QKAYSKDKES KIARSCLSAS SSPSSSSIRD DLHNTT
Arabidopsis Description
NPR3NPR3 [Source:UniProtKB/TrEMBL;Acc:A0A178UGU4]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.